Map Locations of contig_44723 (8374 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44723

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60741 1 883 bp MLOC_60741.1 Available Available None
MLOC_60740 4 1192 bp AK357829 Available Available None





CDS Structure of MLOC_60741






CDS Structure of MLOC_60740






Contig Sequence (8374 bp)

>contig_44723 8374 assembly3_WGSMorex_rbca.fasta
GAGCGGAGCGCGCGCGCTGCAAACCAGCGCTACTGCTGGAGCCAGCGCTGCGCGACGCGC
AAAACCAGTCGCCCAGCGCGCTGCGAACTTGTTTTTTAGGCGCGGCGCGAAGCGCGCCTG
TTGGAGATGCTCTTAGCTTAATAGTCCTCTACTAGGATGATGTGAAAGACTTCCATTTTA
GTAGATATATGGAAATTGGAAAATGAGTACATCTTGCCAATCAGTTCAGGAGTTTAATGT
TATATCCTTATTAGCATTTCGTTTTGACCGATGAATTTTGATGGAAAATGGCAAGATGGA
TTATTACCTCACTTGCTTTTGTGTTTAAAATTGCATTGAAAATGTATTTTTCACTTGCAG
GTTGGTAGATCTGGGAGATTTGGCCACCTTGGCCTAGCTGTGAATCTGATCACCTACGAG
GATCGGTTTAATTTGTATGCAATTATTTGCAGGACTGCTATAGTTTTTTTTTTCCTATTA
CACCTTTTTTCTGCAATGACATTTTTGTTGTTGTTGCTGTGCACAGGTATCGGATTGAGC
AGGAGCTTGGAACTGAGATAAAACCTATACCTCCTCAGATAGACCGGACAATATATTGCC
AATAGTTGTCTGGCAGATTAATCTTGTATGCCCCACGCTGGGAGTAACAAGACAACTTGT
GTAAATAGCAGCTCATCAGGTATGCTATTCGTTTATATGGTTTGCGCTGTGTACAATCAT
TTTCTCTTCAATATGAGGATGGTGGCTGTTGATATTTTCCCAATCACGGTCTGCTTCATA
TAGCAGATATAGACTGAAACACAGGCTCACGTTCTTCACAGTAACACAATTTTCCAAAAT
TTTATTGGGGCAACATTAAGGGTACTGATTCAACTTGCACTTGTACGCTAATAAAATATT
TACTTTATTCCAGAAAGTTTTAACATTGTACTTTGATTGACATGAGTATTGATGCGAATA
CTCCTTGTAATTTGTCGTTCTGCTGTATCATACTTCCTTTGTTTCTACATATAAGTCTTT
TTAGATATTTTAATATGGACTACATATGGATGAATACAGACATATTTTAGACTGTAAATT
CACTCATTTTGCTCCGTATGTAGTCTATATTGGAATCTCTAAAAAAGACTTATATTTTGG
AATGGAGGGAATACACAATTGCTTTTTCTGAAGTATTTTATGCTATACTGATTACTTCAG
GAGTATTTCAGAAAGTTATAAAATTGTACTTTGATTGACCTGAGTATTTTCAGTGTTTTG
TTGTAACATCAACTGATCTCGATTGATATTGCAATGGGATTCATGGCATTGCTTGTGCTG
TAACTGCATCTGCACATATGTGGTGCTGAGTTATTCATTCTTGTGTTTGCAACAGCTTGC
ACTACTTTATCAAGCTCTCCAGTTGATTGGCTTCTATGTATGATGCAGGATTCATTTGTC
TGATCTTTATGGTGTATCTTAAGTTGGTTTGGGGCACTCTGTGACTGGTGAAATTGTAGC
TAGCTCATCTAATTTTCAGCGGACCATTTGTGCGGATGTATCATGGCTAAGCCAAAGCTT
CCCATTACTCTGACAATAGTTGATGTTGCTAACCAGGTCCCTGTTCCGAGACTGTTTTCC
CTAAAACTGTAAGATCTCTTTTCTTTTGACAATGTATTGGCTGGCTAGCTTTTTCTACAG
GTCATTCTGTGAGTTACGTGACCTTGGCGTGAACAGATGGATCATTCCACCTGGCCAAGC
TGTCAAGACGTATCCGTGTCAAGATCTAGGGGTATGAACCGCACATTTCAAGTATCTTGT
ATCTGCATGCATTCTGATGTGCCGTATTTGTAATTCCTAGATCGGATTGGTGTTCAAGGA
GTGTTTGTTCGGTTCAAGATTTATGTTTCCTTTGCTCTCTACATGAGAGCGTGCCACACA
ATGTTCTTGTTCTGGTCGCTTGCTCTCAAGCGAAGGTGGATGTACTGGCAATTCAAGTTG
AACCATTATATTTGAAGAAATATATTTGCTGATGCTTCTTCAATGATCATATTTCAGTAC
TCCGTAGTTCTTTTTGAACAAGCGTACACAACTCAGTTTTTTTTATTACCAAAGCATAAC
TCAGTTGCTAATGTGTCTCTGGATGCATTTGTGATGTACTCCCTCTGTTCACTATTATAA
GTTGTTCTAACTTTTTTTTTTGTGGGGGAGAAGATGTTCTAACTTTTTCTAAATTGAATG
TATATAGAAATGTTTTAGTGTGTTTGTTCACTCATTTCAGTCTGTATCTACTCCATATTA
AAATAGCCAATACATTTTATAATAGTGAACGGAGTATATCAAAATATGACAAGTGAGCTG
TTAGTTATCATGCCCCAAATGCTACACTAGACCTTTTTCTTTTCGAGCAAGCCACACTAG
AAATGGGAGATGACCTCAATTTCTCTGGCTGACGTGGAGTTTACATACAACCGGGGCAAA
GTGGTTTATGATTGGATCTCGGAGGCATTTTTTATTTTTTATCTTTTGGTAGATCAAGTC
CATGGCCTATTTTGACTTCCCTCGGAGCTTTGGCAACCAGCGCAGGTGTGATGTACACCA
GTACACATACTCATTTCAAGGGGGTGCAACACTTCTCTGTTTGAGCCTAATATTTCTCCT
TTCTACCGATTTGATAGCCGAACACAAGGGTAATTTATCTACGTAGCTAGTTGGTTATGG
TGGCAGAGAAGCCCCTCTTCAGGTAGATTGGACTCCTTTATTACTTTATTTAGCCCGATG
TTATGCCTAAAACCGGTATCTTATGCAAGCGAGCCTAGAATATGCCGGCCCGCTCTGGAG
GAGCTCACGCCCGCGTTTTTTTTTTGTTTTTTTTCTTCTTTCGTTTCTTTTCTTCAATAA
CTATTTGTTGGATGTTCTTCTCTGTTTTTTTTTTGGAAAATGATTGATGCGTGTTTAAAA
TAGGCTTAGTGTATACTCCCTTCATCTTAAAATAAGTGTCTCAAACTTAGTATAACTTTA
TACTAGATGTAGTATAAAGTTAAGACATTTATTTTGAGATGAAGGGAGTATTAAAGAAAT
GTTTAACCAAATAGTTCATATCGTACATTAAAGAAACCCCATTGATATAACAATGATTCA
CAATATTGAAGAAGTGTTCAATGAGTAGTTGTAAAAATGTTCAATGTATACTTTAATGTT
TGTAATATAGGAAACACAAAAAGTACAAAAAAAAAAGAAAAACCAGGAGAAAACCCAAAC
CAAAAGAAACAAACAAAAATAAAAAATAAAAATAAAATCACTAATAAAATAACCAAAACA
GAAAGAAAAACCGCAATAGAGACATAAAAAATGCAACCAGCAAACGCAGCGCGGGCGACA
AACTTGGTTAGCCCAACTCGTTCGCATGCTGGCATTGCCCGGTGAACTAGGATTTTCCCA
GGAGATGCATTGTTAATTTTGTGCCGGGCTTAGTCTCAGGTTCATGAAAATCAGGATGAT
GTTTTTTCTGCCATCCAATTTTTTTTCCGCAATGATGCTTCTGCTATGTTCTGACGAAGT
ATGTATAATCTCTGCTCATGTCTCCATGAAAATACATGCTAAAAGGGTACAAGGCATATA
GTATGAATGCATGCTTCAACCAATTAATCCATAAGTCCAAACTAATGAAGAAGGGTGGAT
CATATATTTCAACATGTAGTACATAGGCGAGGTTGCTTGGCGCGTGAAAATCAAGGAGGG
TGTCATGTGCGTGTAGAGCAAGTATTATCATATTAACGAGGATGACACAAGCCCCCCTTT
GTACTATTGTAAAGATAGTGAAGATTAGCAAAATAATGCTCCTTTCGTTCAAAAAATGTC
AAGGTTTTAGTTCAAAACTAAAACCACTACACTTATTTCGGAACGGAGGGTAATTAAAAC
AACCGGGTACATCATTGTTTTTATACCAAAGAAGACTGATTAGCATAACCATAAAATGGA
ATTACATTACAGGGAAGCACAAGCATGATCTTGAATCAAACAACAAATGAGTCAAATAAA
CATATCACCATACATATGTACCAGACATATGTTTAGAATTGAGCTTGAATATGGTCAACA
ATCTTCTTGTCAACCTAGAAGGCTTTGGCAACGATATCATCTAAGATGGATGGCTTGGAT
CCAAACACCGCATTGGCTATGGTGATCACTCCAGGGTTTTTGCTGCTCAACGCCGCAATG
GCTATCGCTTTTGTGGTTCCGCAGTTGTACTGAAAGTGAATTAGCCCTTGCGGAAACACA
AAAACATCCCCTTTGTTAAGAGCTTTTGAGAATAACTTGTTCTCAGGGTTTGAGGTCACA
AAACCAACATAGAGCGAGCCTTCTACCACCGTCAAGATCTCGGTTGCGCGGGGGTGGATG
TGGGGTGGGTTTTGACCATATCGATCATAATCAACACGAGCCAAGGAGATGCCCAAAGTG
TTCAACCTAGCAATATGGGCCACATTAACCGCCGTCACGGCGGAGCCTTGCTTGTTGCTC
GTGTTCCCGGCCATGTGAAGGCCACAGAAGAAGAAGAAGTCTTCTGCCACCGCAGTTTTT
GGGTCTTTGCATGCAAATCCATTGACAAAAACTGCACATACATATGCAGATTTTAAGAGA
ATTAACAACCACACATTTGCACTGATAATTAACTGAAAACATTTCACCACACACGTACTC
GTGTGTTGCATGTGTGGTTATACGTACTTTGGGATGTCCTGTCAGCCAGGGGCGAAGCCA
GCTAAATTTGTCAATGGGGTCATCTTCATATATTACATGGATTCAACCTTAATTACACTT
TGATTAGCATCATTTCACTACAGGTTTTACATAAATCCATTGGGGTCAATTGACCCCAAT
GCCATAGTACTAACTCCGCCCCTGCTGTCACCGACGCAGAAATCCTGAAGCTGGCTTGGG
CCCGAGGCAAGAGCACCGGAAAATGAGAGAGCCAGAAGGGCGAGGAGGAAGAACTTTGCC
GCCATTTGGTAGAGAACGTTTGATTCTAACTAATAAATGGAGTGTGCTTGATCAAGTAGA
GAAATAGGCAGTGATTGTGCTGATGCTGCACAAGAGGAGTCTGTTATATATAGTGAAAGG
AAAAGTGTATTTCATTTGTGCTTGTTGTGTCGGGGGGTATGTGGGATGTCAAGGAAATGT
TCTTCACTAGCTTCCAAGAGAGTTTGAGGAAGAAGTCTAAAACGTGTTCCTAGCAGGCCT
CCACATATCCCACCTTTTTCTTCTAATTTGCATACGCGTGTTCTGAATAAGTCGCGTTCA
TAGTATTTTAAGCCTAGGGAGAGAGCCAAAAAGGTGTCACATATACACAGAGTAAAATAA
AAAAGAGGTTCATTGTTAACCTGAATTCCATGCACCCAAACGGCGCCAATATCGCGGACG
GCCGACGCATACGAAGCGGGGAGTGGAGCGTTCCCCGAGCAAAGCTCGTCCGATGCGGCG
GTGAAAAGACAAGAGCTTCACATTCATTTTACCCCACGCGTGACATCCGCTGAGGATGCA
TCGCCAATCTCGCGGATCACGAAACCGGTGCTGCACGGCACGGCGACCGACGACGGAGCA
CGGCCAGCCCGACGCGGGACGGGACAAAACGAAACGGGGACGCGGAGGGTCTCATCATCA
CAGATTCACAGGGCTCGCCGCCCGAAACAAAACCGCCCGCCTCCACGACGGATCGTCCCG
TTCAATCACGCCCGCGTCGTGCCGTGCCGTGCCGCTGCCCAAATGCCCGCCCGCCCGCCG
TCCTGGCCATTACACCGCGCCTGCATTTACTACCACTCCTATGCGACGCCTGATCGCCCC
CACACACCCCCGCAGCCACAGGCGCGCACAGGCACATGACCCCTACCCTTCCGCCAGTGG
TTTTTTGGAGCGCTCCTCGTCGCGGGCTGCGCCAAAATCCGAGCCGCGCCCGTGTGGCAG
AGGACGAGGACTACTGCCGGAGCAGCCACACTCATTTATGGCAGCCACCCTCCGGTCTCG
TCGGGCTTTGCCTTCCTTGCCTTCCTCATCTCGTCCCCAGCCGTGGCCGGCCAGAGGCAG
GCTTACGTATTCTCATCAACTACCGGTCTTGCCCCATCACTGACGCTGTGCATGCATGAT
CGCCAGCGAGTCGCGCGCAGGAGGATCAACAACAACAGAGGCGGCAACATAACCGGTCTC
GGGCATCCGGGCTCCGGGGCCAGTGTTCGTTCATAGCAGAGGCATGTGCTCTCTTGTTCG
GTGATATGATGGCCACTGCGGTTGTACGAATATTTTGCGCCTGACCTGCCCCGACCCTTT
CCTGTTTAAAAGATGAGACTTAAGAGGAACTGTGTTGCTGTTCTTCCACGATGCTGCATT
TGATCTGCATCGTGGTTTGCTCCGGAGACGAATGCAGGGATGTCTTTGGCAACATCCTGC
TGTATTGGACAGGTTCCTCCAACTGTTGGAGCTCTTGTTTGAGAGTTGGGACAAAGGGGT
TAAGGACATGCAGCCTATGAATGTGTTTGGTTGTCATCTTCAATTTTCCTGAGTTGCATG
CTTGATCCAACTGAGTCTGGTTGAGGAAAAAACATGGTTTGATTGTCTGCATTGTATCAA
TGGCTATTCTAGAATCTACTGTTAGATTATCCGCATATGTGTTTCAGGAGCGAGCATATG
CAAACCACAACCATTTTGTTGCGTGCACGCATCTGTTTTGCTCATCTCTTTCAAATGTAA
TGGACTTACCACTATATTTACAACACAATAGTAAACAGAACATACAACACTACCTAATTA
AAAGCACATGACAGATAAACAATGCATACTAGTAATGGATAAGTTTTAGAGAGCAAAGGC
ATTCCATGCCCCCTGCATGACATCAGAGTGCTTATCTTTGGGCAAAATTTGTCGCAAAAG
TTCAGACCATCATCACTTACAAGTTCGTACCAACTACTTCATATTGACTTGCTATATAGA
CGACAAGACTGATGTTGCCGATGTAGTTGTGCTTGTTGCAACAGGCCCTGCAAATGATGG
AGTTGTTTTGGTTGTAGATCTGAACCTTCAGCCAAGGCCAGACATCCGTAAGACTAGGAG
ATCGACGAGGACGATCTTGTGGCGTTGACAGAAGTATTTCCATCCCCTTCCAGTGACCTA
GACCCAGAACTAGCACCACTTATTCGCTGAGAGCCCGACGAGGCGAGGAGGCTTTAGCAA
CAACCACTGTTTCATCACTGGCTTGAATTTAGGCGGGATGATGAGCATGGCTATATTCTC
CATGTCCTTGATCTGGACATAAAAGTGTAGCCGCTCTCGTGCCCCCTCTTCATGGCTGGT
CATCGACCTGCGTGCAGTGGCTTGCGACTAGCTCATGGCAGTGAACCTGCGAGGGAGGTT
CACTCTTTTTATCCATCAGTTCATCAGGATCAGGTCTTTGGCGTCCTCGGCACCAACCAC
CACATGCGCTCATTCGTCGGCTACGTCCCACTCCGTCTTCACGATCTTGTCAGGTAAGAC
GACATGTGTTAGTAACAGAGCATGATTAGATCATTGCACTAATCATTGGCAACTGTGTCT
GATGCTTGGCAATTGTAAACGATCAATGTTATGATGTGAACATAGTGACAAGGTCATGAA
CTAGGGGTGGCCTAGATAACGGAGACCTACCTCGTAAGCTACACGTGGCCCTTAGGACCA
AGACTACAAGGAAGCCCTAGAAGGCAAAAGCGTCCTTCATGCCCTCAAAGACTAGAGGGC
GACGGTGACATGGATCACATTCATCCCCATGTAACCTATATAAAGGGAGGTCTAGGGCCT
CCATCATTATCCAATCTTAGATCCAAATTCTCGGTAGCAATCGCGCACATCATTGTAATC
TTCTACACAAGGTATACCCTCATCGTGAATAACAAGAAGAAGCAGGGCATAGGGTATTAC
TCCCCGGAGGCCCAAACTTGGGTAAATTATGTGTGCAGACTCTGTCCCGGTACTTACGAC
CTCATCATGAACCCTACCGAGGGATCTGACTATGTTTCGCTCCGTCAATTGGCGCGCCAG
GAATGGGCCATGTTGGTCGGAGACCTAACCTGATCCAGAGAACAAAAAAGAGCGGCTACC
ACGTGATCTTGGGCAGGCCCAAGTACTTAAAGTTCATGATAGTCCTGTCCTACGCCTACT
TACAACCGAAGATGTCGGTCCCAAATGACACGATTACCGTATGGGGGAGCTCGGAAAAAA
GCACATGAAGCTTAGGTGGACAACGTAAAACTCGCCAAAGCCGCTTTGGCCTCAGCAGAG
CTCACCAAGATAAGAAAATGGATAGGAACATCGGAGGTTTAGCTCCGTGGAAACCAAAGC
CAGGGCCCGTTGTTAGGGCATATTTTGTTCTAAG