Contig Data
morexGenes
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Map Locations of contig_44717 (5510 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_44717

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60734 5 1451 bp MLOC_60734.3 Available Available LOC_Os11g10480.4, FRAME:-3, EVALUE:1e-18, 13111.m01114 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_60734






Contig Sequence (5510 bp)

>contig_44717 5510 assembly3_WGSMorex_rbca.fasta
TAACTCGATAAAGGCAGGCGCAGATCTATGAGTAGGAACGTTGCACTACTATCTACAGGA
CCCAAATTGTCAACAGGCTCCCCAAGAACGTTGAAAATTCGTCCGAGAGTAGCTCCACCG
ACCGGAACACTGAGAGGAGCTCCCGTGTCAATCACTTCTTACAGAGGGGCCGGCTGCCAA
GGGACCGGCTGCCGAGGGGCCAACTGCCGAGCCGGGGGCAGAGGAGCCGGTTGCCGAGCC
GGAGGCGGCAGAGGAGCCGGTCGTCGAGGAGTCTGAATCCATGGTTGTTAAAGAAGCGTG
GTCGGCAGTCCGGTCCATGGCGCGAGGAGCGCTGAACCCTGGCGGTGGTCCAAGAGCCAA
CCGAGACCGTCCACCAGAAGAGGGTGTCGAAGGAACGCCAATGGCCGGCGGTGATGCGAC
AGCTGCAGGCACCTGCTGAAATGGAATCACCTTCTCATCAAAGTAAACGTGCCGCGAGGT
GAAGACACGATGGGATACGGGATCATAGCAGCGGTATCCTTTGGTGTTGGGCGGGTAGCC
AAGGAATATGAAAGCTACAGAGCAAGGTGCGACCTTATGGGGCGCAGTAGCGGCGATGCT
AGGGTAGTAGAGACAGCCGAAGATGTGAAGGTCAGTATTGGTGGATGGGGAACCAAAAAC
AAGATGGTGAGGTGCAAAGTTGCCGCGAGTGCGGCAAGGGCGAATGTTAAGGAGAAGGGA
TGCGGTGGCGAGGGCGTCAGGCTAGAAGCGCGGAAGCTCATTGGCATGAAAGAGAAGCGT
ACGCACGCAATCGTTAAGAGTGCGAAGGATGCGTTCAGCTCGACCGTTCTGTTGCAAAAT
GTAGGGGAAAGTGAGATGAAATATCGTGCCATGTGTGGTGAGGAGAGTACGAACAACCAG
GTTGTCGAACTCCTTCCCATTGTATGTTTGGAACGCAAGAATGAGACGCCCAAACTGCGT
AGAGACGTAGGAGTAAAAGGCAACAAAGGTGGTGATGGCGTCAGACTTGTGCCGCAATGA
AAGGTCCACACATAGTGCGAAAAATCATCGATAACGACAAGATAGTGTGAAAAATCATCG
ATAACGACTACATTCTTGGCCTCAAATTACTGGTTGCACACTTGGCACCGCCTCTCCCTT
CCCCACCGCTAGAGCTCTTCTAGGGTAGGTTCTCCTTGTATATGGCCTCATGGCCCTTTA
TTTGTTTCCCTTTGGGATTGTTTGAGTTGTGGCCGCGGTAATACCCTTTTCTTTTCTATG
TTTTGGCTTCATTGTGGCCTTGGGTCTTTTGAACCTTGTATGCTTGTGATGGTTGCTTTA
TATATAAAGCGGAACAAAAGACGTTTCGGACAAAACAGTAGTTTTGGCTCTTCCTCCTCG
ATCATGCAAAAGACTACTTAGGCTATCAATCATGTCGAGTTGCCTTCCCTTGTGTGGGTT
GTCTGCGACCTACCAAACATGCCCCAAATCTCCCTTTACCACACTCGAAATAGGAGTGAG
ATTGGGGTGCTCTGTTGGTGTGAGCATGTTTGTCTGGCTCGGTCGACTTTCTGAATTTGC
TATTTTAAAGTGAGATTGAAAGACTCATGTTTTCTGATTTTTCGTGGGATGTCTTAGTCC
TTCTTTTGAAAATTAAACACCCGATTCCATAAATCATAACGGCTCAGCCAAACTGATGGC
CTTCCGATCCGAAACACTGTTTGGTAGTGCTAGTTGACTGGCCGAAATTTTGTTCGGTCA
CCCCGCAACCGCCCGATCCGCACGTCGTTGACTACTCAATTCGCCAGGTATGATCTGCAC
ACGTCTTTCTTTTCTTTGGAATACCCTCCCCTCTCTCTCAAGCACACGCATAGCATGCCG
CCCGTCTCCGACGAGACCCCCAGCGGCTCGCAGCGCCGCAAATCGTCGTCTTCTAGCACG
GGACGCGTCGATGCTGCATGTGCACTCCCCCATTCCAGTATAGCTGCTCATCGTCCCGAG
CATGCATCCTCTTCTTGGCTTTCCCCACCGCCTAGCTGTTGAGGCTCGTCGTCGTCACCA
TCATCCATGGTCATGTCGTCCATCGGGTCATGGTCCCCATGGTTCCAGTACCCGCGCGAC
ACGGTTCCAGCATCTAGCAGTGCGGTTGATGATGGGGTTATTTACTATGAGTAGGGTCAT
GGACCTGTCATCCAGCACACAGGGTCAAATCGTGTTAAACTTACGACAAAGAGTCAAAAC
AGTGAATTTGGCCTCCTAGGACTACCGATGCAACTCAGGTTTTACTCGGACGTATGAAGT
GACACGGCCAGTCCTCCAGTCAGTCGGACACACAACAACACTCGGGCCAGGACAAGCATC
GACGATGAAGGAGCTGCAACGGTTAAGGGACTTAACATCTTACATAAAGCGTTTGAAGAC
CGACGTTACGAGTAACGTTGTAGTTAGAGTTATTGTTACTAGTAACTTCCCTAATTATTA
CCATTAACTCACCCTTGTAATGACGCTCAATGGGTCCAGGCGCAATCTATATAGGCCTGC
CTTGAGCTCCGAGGCAAGGGTTAAGCACCCTATGTATCTACACCCCCTATAAGCAAACAC
TAGCATGTGAGCTCGAAGCATAGGGTCTTTACCTCTTTCGAGAGGGGTCTGAACTCCTAC
ATCCGGGTGTTACACTTGCGTCGTAGCTAGGCTGCGCCCCCTCACTCGTACCACCGATAT
TATTGTCAAGCTCGTTCCCTCGATAGTTGCGGCATCTGGTGCATGGTCACCGCGGTTCCA
ACATCTGGCGGTTTATAGTCACCGTGGTTCCAGCATTCACCCCTCATCGTTCCAGCATAT
ACGAAAACTGGTTGTAGCAAAAATCGACGGGTGTGGTCACCGTAGTTCCGAAAAAATGCA
TCGGTTGCAACTTGTCGCATGCCGGTTGCAGCAAAAACCGGAGGCATGATCACCGTCGTT
CCAGCTTTCAAATATGGTTCCAGCAAAAAAAACAGGTTGCAACTCGTCGTGTGTTGGTTA
CTGCTCCTAGTTCAGCCGGTTCTAGCAAAAAAGCGACAATGGTCACAACTCTTGAGTTAG
TCGGTTGCATCTTCTACTTTGTCGATTCAAAATGTCATTGGTGGTCACAACTTTTTTCTT
CCAACTTCAAAGCTAGCTGTTTCACATGTGCCCGAGGGGGGTGAAAGAGGAGACGAGCAT
CGGCGGACAAGGAGGAGGAGGTGGCTATGACGGCAAGCATCGGAAAAAGGAGGAGGAGGC
GCCATGGTGGCAACCATCGGGGGAGAGGATTCGCGTGAGAGGTAGAAAAAGATAAAAAAC
GAAGGGATAGAGAAGATGTGAGTGGGGCCGCATGGATGCGTGGCTTCCTAAGAGCATCTC
CAACACGCATTCAAAAAGTGCTCCGCGCGTTACAAGATTCATTTTTTTAGCGTCGGAGAC
AGAAAACAGCGCTTCAACAGAAGCTCTAAAATAGAGCTGGCACAAAAAACTTCAGCGTCC
GCGCTGCAAATTTTGAGCGCGCTGTCTTTCGGGCTGCACTATTGGGACGCCGGATTGAGC
ATCGTGTTTTTGTGCATCTGTTGGACAAAAATATCTTAGCGCGCTGTGCTACCGTTATTT
CAATGTTGTAAGTTAAATTTAAAGGGTGCGTTTATTTGAGATGCTCTAACATTATTGATG
GAGGCGACCAGCCGAAGGTTCTTCCAGGTATCAATTTCCCTTTCATAAATCATATCGGTT
GCCCAACCACTGGCCTTCCGAACCAAATATTACCTGACCGTGATTATTTTCCATGAGCAT
GAGCTTCTGTGGCAAACAGTATTACGAAATGAACTTTTATGACATTATTAACACATATAT
ACGGTACAGTTCTACTAAGATAAAACTACCATCTGACAAAATGCCGACAAAAAGCTCCAT
CAAAATTCCGGTGACCCACTCGACTAACGGAGGTTGGAATCAGAGCAGCCCGGGACGAGA
ATGGAAGGGAAAGTGGTGCATCACAATTGGAGCCCCACTCCTCTTCTTCTTCTCCTCCTC
CTTCCCCGCAGCCGTCACCCGATCACCACCCCCCATCTGCTTGGCCTCGCCGACCACACG
GCCACTCGGCGCCTCCTCTTTCACCACCGCTGCTTTCCGCTCCACGGCCTCCGCTCCCTC
TCCTCCGAGTCCCCTGCTCGCCGGCGACACCTTCCTTGCAGCTTCAGGAGCGCCGAAGCA
GTTCATGCCCAGCACCATATTTCTCTTAAAGCGAGTAGTTTCTGGCTTGATGTCTGCGTC
GCCTCACTCAGCTTGTGTTGCTGTGATGGTCTTGTGGTGGTGGCTGCATTTATAGGGAGG
AGGAGAAGGCGTGGTGCGTGTTGCCCCGAGACGAAGGCTGGGAAGCTTCGTGTGGTCCTG
GATGCGTGGAGATGAAGCACATGTCAGTTAGTACTTCGCTGACTTGGTTCGCCTTGGCTG
CCAAGGTTCTTCCTTGCGGACTTACCTGACGGATGTCGTCGTCGCTGTTCTGACGGCTCC
GTCACTGCGTCTAACATCAATCGTTGGTTCACTGGGACGTGTAGTAGTAGTATCATCACG
GGCCTGGTTTGCCTTTTGACCAGCGTGCACGGGCCACAGTTTTGCCTTTTGCCACGGACC
TATTTCTCCAAAAAAAAAAAAAAAACCACGGACCTGAGTGAAACGTCTACCAACTACGAT
CCTCCGAAATCACTAATTAAGAAATAGTACCTTTTTAGATTACAATAAATGACGTATTAC
ATGCGTACCATTTGTTGCAACCTTAGTATCTTTCCTTTTTTCTAGGCCCGTCTTTTTAAA
CGGTGAAAACAGAAAGCACACTACATCGCCTGAACTTTCAGACCAAGTAGTACCTTCAGT
TCCAAATACCATAAGCACGTCCCAGAAGATTCAGCCAAGCAGTAGGAAATACATACTCAA
TAAGCAACGCAGCAAGAAGACACAGAATATGGAAACATCAGGTTGAGAACAGACTGATTC
AACTGAAACTCATGGCCATAGCAGCAGCAGCAGCAGCAGCATACATTGCTGCCGAAAAAG
AGCTCGTAGTACAACCACTTCTCCGGTAAGGTAATTACAGATATACATAACTAATATTAC
GCTACTTTGGCCAAGGAAGGCGAAACCGCAGACGATGATACATGGAAGTGTATTACCATC
ACCGATGATCTGGTTCAGAAGCCGGCCCCCAGCGCTTATTACATCGGAGCGATCAGAAGC
ACTTGAGGAGGACGCCTAGTTGTCCATGCGGATGATGCAACGGATGCCCTCCCCCTTCGC
CATAAGGTCGAAGGCCTTGTTTATCTCCGAGAACGGCACGCTGTGTGTGATGAACTTCTC
CACCTCCAGCTCCTGACAACAATCGCACGTTGTTTGAGCATGAGCACCAAGCTTTCAATG
CTTAACATTTTGAAGAAGTGTGTGGCTCCCAAGAAGTCGCAAATATAGACCAAGCTGCAG
CAATTAGCGATTCCTGTTTACCTTCTTCATGTACATCTCCACGACATTGG