Contig Data
morexGenes
Links



Map Locations of contig_44703 (6056 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_44703

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60721 3 2774 bp MLOC_60721.1 Available Available LOC_Os04g44840.1, FRAME:-1, EVALUE:0.0, 13104.m04484 protein glycosyl hydrolase family 3 protein, putative, expressed





CDS Structure of MLOC_60721






Contig Sequence (6056 bp)

>contig_44703 6056 assembly3_WGSMorex_rbca.fasta
TAAGAGGATGATGTTTTATTGCCACAGGAAGTTTCAAGTTGAAACACATTACGAGATGTG
AGCTACGAAAAATATAAATTTCAGCCCTGAATAGTGACATTACTATTTGACACTATTCAA
AGCTGATTTTGTCTTTTTTTAGCTCACATCACATAATGTGCTTCAATTTAAAATTTTACG
TGACAATAAAACATCATCCTCTTAACATCCCGTATTATTTTCAGATTTTTCTTTTTGAAA
CTTCAAAATGTATTTTTTTGTGGTTTTCATCGGTTTCCGTCGAATGTTGGTTTTCATATG
ATATCCTCTTGAGAAACAATACGAGAAGGATTTATCACAGAATCGCAGGAATAAAGATCC
TTAAAAACAAGTTTGTAATACTTATGATTTCCTCCATATGGTTATGTGGGTGGACGGTTC
CATAACCCTACCCGATATACCCAATGGGTTACGCTAATATGGTTTTTATCCACAAGGTAT
GCTGGTAATGAGTACCACTGCCATCCTAGTCCGAGCGGTTGTGCTGACACAGCAGCTCAC
CCGCTTGCGCCGTCCGCCATCCTTCGGTCTGAGTCCGCGAACTCGTTGTGCGACACAGCC
CCAGCCCAGCCGCCCCATTATGCTGCCTACCAGGCACCGTGCGGCCGTACCTCACTAGAG
TGCATGTCCGCACCCACCTACAAGCGGCTCGTCGGTGAGGGGGATAGTACTCCCTCCGTT
TTTATCTACTGCACATATTAGTTAGAAATTATTATGAACATTTACAGTAACAGATTTATA
TGTGTGAAAATATATGCAATGATGAATCCAATGATACTAATTTGATGGTGTATATATTAG
TATGTTTTTTCACAAACTTATTGAAAGTATTTAAGATTTGATTTTATACAAACCTGATAC
TATGTGGAGTTAATAAAAACGGAGGGAGTAATAGAGAGAGATTTTCAAACTAACATGTGG
GGGCCATATGCCAGGCTAGATTTGGGGAAATTGCAAAAGCAACTCGCCAAATTATTCAGA
AAGTGATGTTGCCGTACTGGAGCAGTCCCAATAAAACCATATTGGAGATGAATTATCGGG
TAACTTGTTGGAGATGCTCTATACTTGAGTCTGTTGCCCTTGGAAAAAGTCCTTTTCAAT
CACTCACGAACAATGGTAGTATCAGAATTAGAACAATGTTCATCTAACAAAAAAAGAACT
TCCATCCGTTCCTAAATATAAGTCCTTTTAGATGTTTTAATAGAAAACTACATATTGATG
TATATAAACATATTTTAGAGTGTAGATTCATCTATTTTGCTCCGTATGTAATTCCTTAGT
GAAATTTCTAAAAAGACTTATATTTAGGGACAGAGGCAGTAGAACGGTGTCAAATTTATT
GCTCGTGTTTAACTGCAATCGGTTCAACCGTACATGCATCCAATGAATCTTTACAACATG
ACTTTGATACATCTGTACATTTGTAAATCCGACTGTTCCCAATACAGCAGCTATAGAAGT
GACACACTATGCAGCTCGTTATGCTTCGATGACAAACTCGTGCACTTCGTCTCCTACCAT
GAGATGATGGGATCCCAGGAGCAGCACCCTTCTGCCCTCGGTGTTGGCCGCGCTCATATA
TTTGCAGGGATCCACCGTGATCGCCACATTTTTTGAACTGCCGGCGGCAGTGTAGACGCG
CTCGAAACCAACCAGCTGTTTCAGAGGGAAGCCCGGAACGCTCGACTTCGATCTTGCGAA
CAGTAAGACGGCATGGCTCCCGTCCATGGCACCGTCGTTGGCGACCGAGATGTGGACAGA
AAATACCAGGGACTCACATGATGCGATGTCTTCAACTTGGACATAGTCCAATCCGTCCCT
CCGTGTGTATGCAGGCTTCCTACTGATGAGGCCTGGTACCGGTGAATGTGACAGGCTAAT
TCTCTGTGGAGCTTGTACGATGTTGTATGAGTACTTCGAGTAGCTCAGACCGTATCCAAA
ACCATACACAACTTCTCCGGTGTAAAACCGATATGTTCTTCCAGGGTAGCCGCGTGAAGG
GTCGGCTCTCATGTTCATATCATTCATTGGAACCGCGGTGAAGGATTCGGGGTACCAAGT
CATGGGCAATTTTCCTCCTGTCATCATCAGTGTACTAGATTAGCTAATAGTACAAGATTT
TTTATTTGACCGCATACAAGTGCAGATTATTTGCTCACCTGGATTGTACTCTCCGAAAAG
AATTTCTGGAAGAACTTGTCCACCAACTTCCCCTGGATATCCAATCCACAGGACACTTGC
AATTCTTGGATCTTGCTTCGCAAAAGCAACATCGACAGGACCGCCGCCAGTGATAACCAA
CACAATAGGCTTCTTTGTTACACTGGCAATGATATTCACAAGATCCTGCTGCCTGCCTGG
AAGGAGAAGGGTCACTCTATCAAGATCTTCGCTCTCCTGAGTCAGGTTCAACCCGGCAAT
CACAACAACAATATCAGCTCTTTTAGCTGCTTCAATGGCTTCGCCAAATCCATCCGGTGA
GTCACAAGATACATCTTTGCAACCAGCAGCAACGGTCGTTTGCGGAACAAAGGCTTGCAT
GCCTTTAAGAAAGGTGATAGGGTCACATGGAACGCCTGAACAAAGTGAGACTTACATTAG
TTTACGCAGGATAGAAAAATAGGAGATGCTTAAATAAGTCTGATGATTTAGACCTGTGTA
ATCTCCCCCCATTATGTATGCATCGTTTGCTGCCGCTCCAATGAGAGCAATATGACTAAC
TTCGCTTCTCTTTAGAGGCAAAAAACTGTTATCGTTCTTCAACAAGACGGTACCCTGCCT
TACAGCTTCTGCTGCGAGCTCCCTGTGCTCTTTCGTGCAAACATTGCTGGGGCCTAGTCG
AGTGAACCATTGATTCTCATTGGCTTTCTCAAAAAGTCCAAGGCGTAGCTGAACAGAAAA
CAGATTATAAAGAGCATGGTTGATATCTTCTTCTTGTATCTTTCCTTTTTCAATTGCCGA
CTTTGTATGCCGAATCAGGAAAGACCCACAGTTGACATCCATTCCTTGAAAAACACGAAT
CATATTCAGCAAGAAAATCTGCTTGCTTGAATGATATACAGAAGGTGGTCAAAGAAACAT
ATTTCGAGAAGATGTTGAACCTTAATCATGCTAATTCCGGGAAGGTGTACAAGTTCATAT
TTTAAGCAGTCACGGTGAAAGCAGAAAGTAAAATCCTCGAAATTGAGTTCACATTTGTTG
GACTCCAAAATTAAATTTTATGTCCCTAACCTCCTAATCTTTATTTTTTTATAGTGTTAT
TGATCTGAGAAGTGCAAGTCCTAGTCCAGAAAGACGGCAACAAGCTAATAAAATCCCGTA
TGCGATGCTCAGCGAAAGAGAGAGGGTTTCAGAAACTAACCGGCCTTGAGAACAATCGCT
ACTGAATCTTCATCTGAACTCGTGTATGTCTGGTTTTCGTGGATTATTGCCACTGCATCA
CAATCAGATACGATGTACCTTCGGACAAAAAATAAGCACCGATATTATGACATTAGTGTC
ATTCCTGACATATCTAATAGTTCAAGGCACATGCAGTAGAGAACAACTCAAAGGAGAGCA
AGCAGTACCCTTTAAATCCCCATTCATCCCTAATCTTCTGCAGCAGATCTTTACGGGCAC
ATGCTGGCACACCATTTACCTGGTTGTATGAACACATCAAGCAACTTGCACGACCCTCCT
GGATGCAGCTCTTGAAAGGAGGCTCGTACGTGTCCTCGAAATCTTGCGCATTTACCTACC
AACAATGGATGCAAAATTTAAAATTGTAATAGAAGTTTAAAAGAATTCTTCACCAGATTC
CAAGCAAATACATCTGTTCTTTGATTGAATATACTGTTCAAAAAAGAAGCTGCTCTGTGA
TTTCACGTTGCACACATTTGGCACAGATATTTTGATTCTCAGCATCACTGATACATGATA
CTCCTACTCTACTCTGAAGGTTTCAAAGAATTTGTATGCGATCCTAAAAAAAAAAAAGAA
CTGTACGGAGAATTGTTTTTCTGTTCATAGACTGAACTGGTAAGGTAGTGTGCTAGTGTG
ATGTCAAGTTCCTGAAAATCAGCATTATAATCATAGGCTGTTATGGTATGTGACATACTT
AATGAAGTGAACAGCCAGCATGATTAATAAGCTAGATAAAGTGTAATAACCGAAAATGAG
CTTTTGATAATACAGTATAAAAAACAGTAAAAAAACATTCGTAGGAGCAAACGCTTCACC
TCGGCATTGAAGGTGTAGCGCGCAAACTTGCCCCATTTCTCCAAGTCATAGGCGATGTAG
TGCTTGCAGCAGGCGGAGAGCATCATCCTGCCCTCCCTGCCGTCGCCGTACTCCCCCTGG
AAGCCCTTGACATACTCGACGGAGTAGGCGGCGATCATGGCCGGGTCCTCGCCGGGCGTC
TCCTGGCCGCGGCCCCACCGCGGGTCGCGGAAGACGTTGATGTTGGGCGCCCAGTAGGTG
AGCCCGGCCTGGCCGGCGTTGTGCATGGCGCGCGCCTCGACGGCGACGGCCTCGGCCACC
GCCCGCCAGAGCGAGCGGTTGAAGGCGGCCGCGGAGAGGATGACCTGGGGGAAGATGGTG
GCCGCGGCGACGGGGCCCGAGGAGAAGTTGACGCCCGGGCCGTTGTCGGCGAGGCCGTGG
AGGGACTCGGACCACCACTCGTAGGGCGGGACGCCGAGGCGCGGCACGCCCGCCGCGGTG
TTGGAGAGCTGCGCTATCTTCTCGTCGAGGGTGAGGAGGGAGACGAGCGCGCGCGCGCGG
ACGGGGAACGGGAGCGAGCCGTCGCAGAACGCGTAGGCGTTGGCCTCGGCCGACGCGCAC
GCGCGCGCATTCGGCGGCCCGGCGGCGCCTGCCCCGGCCCCGGCCACGACGAGGAGGAGC
GCGAGGAGGAGGGAAGGGGCAGACATGGCGCGCTCCGGGGCGGGGAATTTGGTCGAACAG
TTGGTGGCCGCGCTCCATCATATAGGTTCAGTCGTCACGATGGTGACGGCACGGAGGATG
TTGATCCCTGGGAGTATTTTTCTCCCCCTCTTTCGAAAAAGAAAAGAAAAAGAGAGAGAG
GGAGAGGGAGCGAAGATATATGAGAGGAGAGAGCAAAAGCTTCAAGGTAGATGCAGCACA
ATTTAGCGTTCTTTTCTTCAGGGTCAGACACTTGGCTTGTACAGTCGTCATTGCAGCGTA
GGGGATGGATGGGTGGGCCGGCCGAGAGGATAGCGCCAGAGCGTCATGCCAGAGGGAGCG
TAATTTCCCTTCTTTTCTTCAAGGCCACACCCAATTGCGTGCGAGATCGGCTCTCAGTTT
ATTATGGATAAGTTTTAAGTTCGTATTTTTGGCAGATTGTGTTATCATATTGTTGCCGGG
ATCGGGATGCTTGGTGTCCGCATCTCCTTTGCTAAATGCCAAGCAATGACAGCTCACCCT
TCATTACGCTACTACTACTGCTGCCGCTGACAATCCATTAAGAAAATTTGAGCTTGAGTG
ATTACAGATAGTCGGACAATGGGTCCCATTGTTTTTTTTCTTAAGGCTGGTTGTAATGGG
TAGTATTATATATTATGATACTAGTGTATGATACCACATTCGTAATGCATAGTACTATCA
TATGTTAGTATCATATAGAATAGTCTATTTATGTGATGCAATACACATAGTACTCCCTCT
GTTTCTAAATATAAGTCTTTTAAGACATTTCACTAAGAGTCTACATACGAAACAAAATGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNTATACATCCGTATGTAGTTTACTAATGAAACCT
CTTTAAAGACTTNNATTTAGGAACGGAGGGAGTAGTACATCATTTAAAATGATACGGTGT
CATGATATGATACCCAACTCTCTCTTTCTTCATTTAATATTATGTCACCTCATTGAAATT
GTCTAGTTAGTATGCATGATACTACCTATGATACTCCCATTACGGACAGCCTTAGAGCAA
GTACAATAAGGNNNNNNNNNNNNNNNNNNAGGATTAAAATACTATATTTTTGCTGA