morexGenes - Barley RNA-seq Database

Contig contig_44702
Source Contig contig_44702
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44702 (8043 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_44702

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60720	3	1709 bp	MLOC_60720.1	Available	Available	LOC_Os07g12890.1, FRAME:+3, EVALUE:5e-147, 13107.m01339 protein metal cation transporter, putative, expressed
CDS Structure of MLOC_60720

Contig Sequence (8043 bp)

>contig_44702 8043 assembly3_WGSMorex_rbca.fasta
CTCTAGGGCATATTTTCAACAGACAAGCCACTTCGGAGAGGAATCAGAGATGGCCTTCCC
AGGTTTCAAGACCACACAGCTACATAAAAAGAAATCCAAAGCGAAATTTTAAATAAATCC
AAAAGAAAAAAAGGCAAGAAACTGGGGTGTCACATGCTATCAAGCCTATTGATGTGTCGT
ATAGGAACATACTAATGAATCATTCATTCTCCACTTGATCTAAAAAAGATCACCGATCCT
CCATTGAAATTGTAATATTCACCTAATTAATCCCACAATACAACTCGGAAGTACGCTGAA
TAAATCGCGAGCATGCTCACCATGCTAAATAACTTCGACTTTAGTTGTTGGGGCGACAGG
TCGGCGAGCCAGCTGACCGGGGGGCAAAGCTGCCCTAAAATGTTTCGAAGTCTTGACTCC
TCTGCATTGCATACCCAAGGGTCGTATCCCCAACACCCGCCGACATCCAACTATCGAAAC
CGGCTAGAGCTCGTCCAGAACATCCACCAGGATCACCGCTCTTGCGCCGCCTTCCCTACC
AGCCTCACACGAAGGTAATGGCAACTGCCCTCAACCTAGGTCGCCCACGGCCCGCACGCC
TGAATATGACGAGCCATGAGCATACTTTGTCGCCCTCAAGCGTGCACCAGAACATCTGCC
CAAGACTTGCCTGATCTGAAACTAGCCATACCGTCGTACCATAGGCGCCAACCCGGCAGT
CGCCGCGACGTAACTAGTCACCCTTGATGCCGTCCCAAACCTATGATGCCGCGCCGCGAG
GCCCGCCGTAGATTAGCGCCCCAGTCGAGCTACCGTCCATGCCGGCTGTGTGCTGGGCGG
TGGCGAGGGAGGAGGGTCGATGAAGGAGGTGAGGGGGGCGTGCTAGGGTTCCCTCGGCGC
TCGCCTTATTTGAGATTTCGATAAGATTAAATTGGTTTGATTTAACTAGGTTAATGCACT
ACGTGGTTTGAGAAAGTATCGATTTATTTTGGTTTTATTTTATAGGGGGCTGCTACGCGT
TCACCGGCGAATGTTTAGTAAACATCCGCCACCTCGACAGCCGTTCGATCTACACGCACA
GCCATCCGATTCGTCCATCCGATCCGTGCGTGGGGCTCCGGCCGACACCCAGTGATTCCT
GAAACGATGGTCGAGTTGCAGAAACAATCGCTTTGTTGCAAAAAATAAACTTTGGACCCA
TTAATTCCTAAAACAAAGGTCGAGTTCGAGAAACAATCGCTTTGTTGCAGAATTTATTTT
CCTTCGTCTTTCAGCAACAACGGTTGTGTTGCAGAAACAATTCCCGAAACAACGAACGGG
TTGCAGAAACGATTCCCGAAACAACGAACGATTTCTCCAACTCCTGCAACAACAGCCGTG
TTGCGGAAACAACGACCGCGTTGCAGAAAATTGAAGAGGGGATGAATGGCTGCAAAGTTA
GAGGAGAGGGAAAGGCAGCAGAGAGGAAGAGACACCTCATCTTCCGGCAAGATCTCCTCG
GATGCTCCAGTGCCATGGGCGTGTCTAGCGCTTGCAGGAGCCAGATCCAACGCCTACAGT
CTCCCTCTCCTGATCCAACCAGCGCCCGATTGCTCCTCCCGCAGCGCGCGGACGCACCCA
CCCAACCGGATGCCTAGCTGCTCCAGCAGCCATGGTCATGGCGCCCGAGCGTCCGTGCCT
TCCTGCATGTGCACTTGCGAGAGGAGATGAGAGAGATGGATGAGAGCGTGGGCTTACATG
AGGAAAATTGGGGAGATAAGAACGAGCTGGTCCCACAGGGACACGTGTCGCAAGCGTGAG
GAGGCGGATGGACGGTGAAAAATCGACAGGTTGAATCAGATCTTTTCCCTATTTTATGTA
GCGTTGGTTGGGCTTACAAAAAATCAACGTAAATCCAAAGGGGGGAAAGAAAAACCTGGT
GACAGGAGGAGTTGACGGAACAAAGTCCTTATACCGCGCTTCCGTGGCGGCAAAATTACC
ACCTCATTGGAGGATAAAGTGTCGTCATTGTGAGTAATTTGCCCAGTGAACACCCAAATA
AATCAGGAAGACAATCTGCTTCGCCAATTAACACATCATCCATCGGTTATATGGAGCGCG
CTTACAAAGATGACAACCTGTGGCCTGTGCTACGCCCTGTATTCTCATACATGTCGTCAC
CTTGTGACAGAGATAGTCGTTTTCATCTAAACAGATGGGCGCCTAATTCCTCAGGTAATT
GACTCTATATAAACCCTAATTAACCACGACATGATGTCTGCAGCAGAGCTGTTCCTGCCT
CCATGGCTTCATCTATATATAAACCCGGCAACCACTGCCGCTAAGCTGCGAAGAAGCTCC
TCAGTTTCCTGATCTCCCTCGCGTCCTCGTCCAGTCGCGTGCATCACGACAGCCAGCCTA
GCCATGAAGCCTAGCGTTGCCGCCCTCCTCGTGTCCTTCGTGGCGCTGCTCTTGGTCGCC
GCCGTGCGGGGCGATGACGACGGCTGCGGGTCGCCGGAGTCGGCGGGGCAGGACCGGGCG
CGGGCGAACCATCTCAAAATCGCGGCCTTCTTCTCCATCCTGGTCTGCGGGGCGCTGGGC
TGCTCCCTGCCCGTGCTGGGGCGGCGCGTGCCCGCGCTCCGGCCCGAGGGCGACGTCTTC
TTCCTAGTCAAGGCGTTCGCGGCGGGGGTCATCCTCGCCACAGGGTTCATCCACATACTC
CCCGACGCGTTTGAGAAACTCACGTCGCCCTGCCTGCTGCCTTCCGACGGGCCGTGGCAC
GACTTCCCGTTCGCCGGGCTAGGGGCCATGGTCGGCGCCATCGGCACGCTCGTCGTCGAC
ACCGTCGCCACGGGGTACTTCACGCGCGCCCAGCTGAACAAGGACGGAGCGCACGGCCAC
GGGGCGATAACCAGCAGCGCCGCCGTCGTGGACGAGGAGAAACAGGCCGCTGCGGCCGCC
AGCGAGGAAGCCCGTCGTCACGAGGGCGGGGAGCAAGAGGTACACGTGCACACGCACGCT
ACCCATGGCCACGCCCACGGGTCGGCAGCGCTCGTGGCGGCCGTTGGCGGCGCCGAGGAC
GAAAAGGACACGATCCGGCACCGCGTAATCTCTCAGGTTGGTGCGAGTGGTCGCGTAATA
CTTTTTGTAATCTTTTTGTGACAAGACCATGACTATGTTTTGCATTTGTAGGTACTTGAG
TTGGGTATTGTGGTGCACTCGGTGATCATCGGCATCTCCCTCGGCGCGTCTCAGGACCCG
GACAATATCAAACCTCTCGTCGTCGCCTTGAGCTTCCACCAGATGTTCGAGGGAATGGGC
CTTGGTGGCTGCATAGTTCAGGTATGCCCATAGACGTTATGAGGTTTGTCACGGATTTTC
AGAAGTTATCTCTATCTTCTACTCCATCCCAGATTCCAATAAAGACTACATACAAAATAA
AATAAGTAAATAAACATCTAAAATATGTCTATATAAATCTATATGTAGTCATTAGTGATA
TTTAAAAAAAATTATATTTATATTTAGGAACAGAGGGGCATATCTATATTTTCTGTTATA
TATATTTAAAGTTTCGTTTTTCACTTTCTTCCCACCATCTCTTCGTCCAACCGTTCCTGT
ATGATAATCAATAATCACATTAATTTACTAACCTTTTAAACCAATTTTACTTTAATATAC
TTATCAAACTTGTCATAAAAATATAAGATAAATCACGTGAATGATTTGATAAACATTCGC
TTACACAATCACATAAATATGAGCAGTCCAATTAAAAGCTAACACGCTAGAATATTTATA
TGCAACACGCGGGCCTTGTCCTAAATATTACAAAAATGGCATTCAAGCATATATAGAGGG
AAAAAAATCTGTTGGTAATACAAAATTATGTATCTTGATCAAAACCTAGCATATTTGGCC
ATTGACTTGTGGAGTGCATGTTATGCAAACTAGCAAAGGTGCCACTACTCCACTTGCTTT
CCTATTTTTGTGGAAAAATAAAACAATAGGAGTCTTGCCATGCATGCACGAACATTTTAA
AGGATGGCTAGACATGCCTAACGGGAACTTTGCATGTGTGGTCTCTATCAGAAGTGGTAA
CGCCCATCTAAATAAACACTAGGACTTGTGCTTCGGAAAGGGGAGAATTCTATGGTGCTC
CTCCGTGTAAAGACATAGAGAACCATATATGTACATATCTAGAGAATATATGTCTGCTAA
TCTTTCTTTCCGACAACGATGTCTATAGTAGTCATGAGAGAGAAGAAAGTGCAGCAGAGC
ACTTCGGGTGGCCTGGAGAATAAAGCAAATGAACCAGTAACTGCGTAACTACATTCTACA
TATGTCATGAGATGTTCGAGAACAAAAAAAGTAACCCACTTTAATAAATTCAGAGGAATC
TCCTGCCAGTTTTGACCAACACTTTTTAACCAAGAATATCCTCACAAGACCATGATTATT
GGCACCATTATGTTTATAACTTCACACTACAACTGAATTTTGTCCTGATTAGTTTGTGAC
GATGATGCAGGCAAAGTTCAGGGCTAGGTCCATCGTGACCATGATCCTCTTCTTCTGCCT
CACAACGCCGGTGGGGATCGCCGTCGGCTTTGGCATATCGCGAGTGTACAACGAATACAG
CCCGACGGCGCTGGTGGTGGAGGGCGGCCTCAACTCCGTGGCGGCTGGGATCCTCATCTA
CATGGCCCTCGTCGACCTCCTCGCCGAGGACTTCATGAACCCCAAGGTGCAGAGCAGGGG
GAAGCTTCAGCTCGGCATCAACATCTCCATGCTGGTCGGTGCAGGCCTCATGTCCATGCT
CGCCAAATGGGCCTAGCCGCAAGCCTACAACATGAAACAGTTTCCCTACAACATGAACCA
GTTTTGCTCCATGACATATATATGTACAGACGTCCCCCTATTGGGTCGTCGAATTTGAAA
CGATATAATCTCCCAAACTAGGTAATGCCAACCCAGTAGCTTAGGCATATAAAGAAAACT
AGTTCTGGACTGAAAGTTTGGGAGGTGCGCAAAGTGTGAGTGTTTATCGCAAGGCATGTC
GACATTATGTCGCCAGCTTTGACCAGGCTTTCAACCAAAACTGATGGACAGAAATTCTTC
ACGTAGATGATGCCATATCCGCCAAAACAAAATGAGTATATTATTGACTTTGACCGAGAA
CCAAGAACCAACTGCAAGCTAACCTGGGAGTGAGAGTTGAGAAATTCGCAATGACACGCA
TGAGGGGCACACATGCATGTGTTCACTCATTCGCTTCTAATTACTGCACTAGTTATATCA
TTAACCTTTACAGCTGCACTTGGGTTCATGCTTGCCAGCTTTTGGCAGAGTTGCATGGGT
TAGAGCATCTCTAGCAGACCCCGTATAATGCCCCGACCTACAAAATAACCACTAAAATAC
GGGTCAAGATAAAAAATGCTGCCGAATCAGACCCTGCAAACACGTCCGGCTCGTAAATTC
TTTTGCGAGGCACCACAAAAGTTCGCCATCAATCTTTAAATTCACGGGGTGGGAGGCGAC
CCAAGCTCACCCTTTATCCGCAACGAGATTTGGCGCGAGGAAAATTTCCGCGCGGCCGTT
CCCCGCTCCCATCTCCTCGACAGCCATTGCCCCGCCCACCGCATGCTCAGGACCTTCTTC
ACCGCCATTCTTCGCCGTCATGGAAGCCTTCAGCCGGCGGATCTTGTCAACGTGTAGGTC
GCGCACGCGCAATCTCGTCTGGCGGATCTCGTCACCGACCATGTCGCCCCCACTGTCGCC
CTAGTCACCAACGGGCCAGCCCGCAAGCGGCAAGGCAATGTCGTCGTGCAGGGTGGCATT
CCAGCCGGCCCAGCAGGAAGGGAAGGCGCGCCGGGCACCGCCGCTGCTGCACGATCTGCA
CGGCCGCCGGCAGGGAAGATGAGCAAGGTTTCGGGCATGAAGCGGAAGAAGGTTCCTATG
AAGGAAGCTTCGACCACTCTATCCGCCCCGGCAAGACGTTCCTTGACGGTGCCTTTCTAC
AACACTGCTTCCACCGCATGCGAGGTGTTCGATGAAAGGGTCGGAAGGTATGCATCTTCG
CTCACTTATTTTTGCTTCGATTTTTCGCCATTGTGGTAGGTCGTGATGTGCTTTCACTCA
ATGTAGCGGTGATTCGAACAATGCCGCTGCCGAGTTCGTGAACTTGTTGGCCATCAATGC
AGACAACATCGATCAAGCCCCGATCGTTGGTTTCGATTACAATGAATTGGAGGGTGGCGT
TGATGACCACAGTGGTGAAGATGAGGTGGGGGATGTAGATGAGGGGACGTATCAGCAATC
GCAAGGAAAAAAAGCGTGAGATTGAAGAACTACACGATCTTGGAAGATCAAATCTTGATC
AAGGCTTGGAGTACGGTGTCTATGGATCCTTGCACATGTGTGTCCCAAGCCGCCAAGACG
TATTGGCAAAGAATTGAAGATAAATACTTCCAATTCATGGCCAAGTATCCCAACAGGACA
ACATGGACCTTTCGGTCACTCCAAGGTCGTTGGGACGTGATCAAGACGACTTGTAGCCGT
TGGGTAGCTTTCTTGGAACAAGTTCACAATACTCCTCCAAGTGGAACCGTCGAATCCGAC
TATGTGAGTTGGTTCATGTCAAATGGTTCCATCAGTTTGCATAATATAAAATGGTTCCAT
CAGTTTGACTTTGTTTTAATTGTGTAGGAAAAACTTGTCCAACAACCATATAAAGACATG
CATGTCTCCGAAGGCAAAAAAAAAGCATCGTTGGGAATTGCGCAAAAACTGCGACAAGTG
GGCGTCGATTGACAGAGAATTCCCAGCGAAGAGAGGTTCATTTATGGACATGGATGAACA
TGAAGATGATGATGTACCAAGAAACTTGAACAAGCTCAATGGTGACAAAAAGACAAAGGA
GAAGATTAAAAGGGAACACGAAGCATCAACCTTGCTGGACAAGATAGATTCCATGCTGCA
ATCAAATGAGGTATTGCTAGCAAAGTCTTTGGAGGCAAAGATAGAGTTGGTCGAGAAGAA
GGCACGAGAGAAGCAAGAGAGGTGGAAATTCCTCAAGGAAGTTGAGGAGAGAAAAGCACG
TGTCGCTGAGAACAAAACCATGGCCCACCTTCTTGCCAAAGAGAATAGGATTATGACTTT
GAACCACAATGACAAGGACGACGTCAGCAAAGAATGGAATGATATGACAAGGAGAGAAAT
CTTGAAGAGCAGGATGTTTGTGTGTTACAATGGCGGCGATGGTTTCTCCTCTGGAATCGG
AACCGATGATATCAATGCCGGAGTAGGGACAAGTGCCGGAGTAGGAACAAGTGCACGCGA
TGGATTCGGGGGCGGCGATGACCTCGATGGTGTAGACTGAAGAACGACCAGGATGCATGA
AGTCCTTTTGCATTTGTCTTTTAAACTATGCTCTCATTTCACGCGCGAACTATGTTTTAT
TGTTTCAATTCAAACTCATTTTCCGGAATCGCTGTCAAATTCCAACTATGTTTTATTGGG
AGATATTCCGCGGGTCGACGCGGTGGCGTCCGAGCAGACCCAGCACTGACGACCCGTATA
ATAGCATCTTATGCAAATATCCTTTTATACGGGTCCGTTTTAGGGGGTCTACCTCTATCC
GCACCTGCGCCGGACCGCAAAATCCATTTTTCACGAACTGTAAACGACTTTTGCGGGTCG
GCATTATACGGGGTCTGCTAGAGATGCTCTTAGAACATCTCTAGAAGACCCCGCATAATG
CTCCGACCCGTAAAGTAACTGCTAAAATATGGATCCGCACAAAAAATAGTTGCCCGATCA
GAGCCAGCAAATGCTCCGGATTCGTAACTATTTTTGCGGGGCGCAGTAAAAATCTCCCCC
CAATCCGAAAAACACAGTTTTCATGTCCGCTCTGCGATACCCTGTATCGAGAGAAAGCGG
TTGGTGGGAGCCCAACAGGCACGAAAACATCCGCGTCCGCCATCCACGTCCACCGTGCGC
TGTCCTAGATGTATCCCCGCCCGTCCCCGGACGCCGGCCACCCGTCCTGGCGGCCGCCCT
GCT