Contig Data
morexGenes
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Map Locations of contig_44665 (6259 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_44665

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60690 4 3497 bp AK365668 Available Available None





CDS Structure of MLOC_60690






Contig Sequence (6259 bp)

>contig_44665 6259 assembly3_WGSMorex_rbca.fasta
GCCTCGTGGATTGCTAATCCATGTGTCAACCTGCGTGCCCACCGTGTGCGCCATGTACCT
CTCGGTGGCCGTCATGGCGTGCGTCGCTGGGCTTCTCGGTTGGTTCGCACCCCCACTTCC
CAAGCGACCTAGCCAGATGTTCACGAGCTATATGCTGCTGGCCGATTGCTCGATCGCTGT
CATCTTTCTATACTTAGTCCAGTTACTTAGTACCACTACATATGTATGTATGTATGTTCT
ATTATGTGTTGATGATCTGGAAAACAGCCTCTGTTTTCTCTAGCATGTAAATGTAAACAC
TTGCTGATTACAGTAACAACAAACAATGTCTGACTGATTCACTGCAACTGCAAGCAAACA
CATGATGATGATGATGATGATGCCTTAATTGAGCTCAGCTCAGCTCAAGGTTGAGCGTCC
AATTCCAATCCATCGTCTTCTACCAGGGAGAGGGAGGGGTACAGTAAAAAAAAAAAAAAA
AAAAAAGTAGACTAGAGCATCTTCTACAAACAAAGTTACAGACAAGTCGTCGGTCACTAC
GACAATGGCGTCCCGTCTCGTCTCATCTCATCTCATCTCATCTACTACAACGCCTAAACG
CAACGCAGCCCAGGTAGGGGGTCTGCCTACCTCACCCAGCCCTTGGTCTTGTTGCTGCTC
ACCACGGTAGCCTGCTGCTGCCTGGTGACCCTAGAACCAGAAACCGCCTTGTTCGCGGCC
ACGCTTGCCGTTGTGGCCCTGGAAGACGCGGACGTCGAAGGCCTAGCTGGGTTCGACGCC
CTCTTCGACCTCACCTCCCCGCCCTGCAGGCTCCTCTTCCTTGTGGCGGCGGCGGCGGCA
GGGAGCTGGTTCTCGACCTCAGCTTGCAGGCTGCTCCTCTTCCTCCCCGCGTTCTGCCTC
GCAGAGGCGGCAGGGTGGCTGTCCTCCCCTTTCCTCTTCTTCTCGTTGACAACGCCCGCC
TCGGCGAAGAGGGAGCTGGGCACCCGCTTGTTGGCCGAGTCCGAGCTTCTCAGGATGCGG
TGGTGCTGCTGCTGCGCCTTCTCGCTCATCACCTCCCTCGCACAAGGAGGCGGCACCATG
TTCGCCTCTACAGGGGTGGCAGGAAGAACCCTTGGTATTGGATTGTTACAGGGTTCAGGC
ATCGCGTTTGCGTCTTGGAGTTTTCTTGCCCCCATCTCCGGTAGTTTCTTCTTGAGGTCC
AGCAGCTGAAATAACATGGAGGAGGTCCGTCAGTCAGGATCTGCATTAGCATTACTAGTG
CCCTCCAAAATGTAAGGAGGAGTGTAATGCAGCAAAGCTATGAGAAAAGGATGTCCACCT
GGCTCTCAAGCATTGATTCTGTTTTCTGTGCTTCCAAGAGCTCTTGTTCCATTTCCCTTG
CCTACACAATTTTTTTGACGAATATACAAGTGTCATCTACACGGTGCCTTGAGAATCTAC
AAACAAACCCTTTGGTTCTCAAGCTTAAAAATACCTTTGATTCTGCAGCTGATCTTTGCT
GTTCCTGTTCCTTGAGCTTGAGCTCCAGCTCCTCAATCTGAAACAAGTACATAACGCAAA
TCAATCCTAGTCTCTTGCTAATGCCCATTGATGATTATTATACTGGTAAAAACTTCTTCT
GTACCGATTGGTTAAGAGCTGCAACCTAAGAAACCTTTGGTTCTCAAGCTTAAAAATACC
TTTGATTCTGCATCTGATGTTTGCTGTTCCTGTTCCTTCAGCTTGAGCCACAGCTGCTCC
AGCTCCTCAATCTGAAATAACGAAATCAATCCTAGTCTGTTGCTAATGCCCATTGACGAT
TATTATACTGATAAAAACTGTACAAGTTGACTTCTGTACCGATTGGTTAAGAGCTGCAAC
ATCACAGTCTGATCGGTGCTGCTGTTCAAGATTGCGCTCCAACTCCCTTATCTGCAAAAG
GATAGCATGGATGTATCATTATCTGCTCCTTTCCCCTAAACAATTACATTACAGTAGCTG
TTAAACGACATCAACTGCTTCCATTCATACCTTCTGCTCAAGCGCAGTGCATGTTTCTTC
TTTCTCCTTAAGTTTTTCAGAAAGCTGATTCTGCTGCTTCTCCTTAGAGTCTAGTTGGCT
TTCAAGCTCCTTCACCTTCAAGTTACAAAAAAAAAAATCTGTAAGGCAGGACTTCCAAGC
GAAGGAAAGCAGCCTAGAATCAACAGAAAATTCAGATATTTCAAACTGCAGCATTGGCCA
CAATTACACATACCTTCTCTTGCAAGTTTTTGTAAAGTTGCTCTTTTCCCTTGGTTTGTT
TCTCCAAATTTTGGCAGTTCTCTTCCAGCTTTCTCAAAGAATCGTCCTTAAGCTTGACCT
CTTGCTTAGACCTTTCAAGCTGACCCAGAAATATCCATCAGTTCAGCTTCAAGCAGGCAC
AGGAAAGAAAGCTTCAGGAGAAGGCAGTATCAACACTCACCATTTGTTTGAACTTCTGAA
GTTCGGCCGTGTCAACCTGCTTCTTTGCCGGGCCCAGTTCTATACCACGAACACGGCTAG
CAAAGTTTAGCGAACTCAAGGTTTCCGACGCATCGTTGTCGGATGGGCTGATTTGTACAA
ACATTAGGGCTTTCGAATCCCCTCCTGTTACCGCAAATGTGGAGAAGAACAAAAAAGAGC
AGATTAATATCGTAGCCGAGTGAGAGAATGCAGAGCAACAGAAATGATTAATATTTAGTA
CTGTGTGTTATTGATATGAACAACATATCAAGTTACCTAGAGAATCTTGGAGCAAGTGTG
TCAACTTGGAATTTCTGCTCAGGAAAATAAAAAATATCAAGGCAGTGAGAAAACAGGAGC
TGATCGGTGCAAACATGTTACTGACTGAGAGTGCAAACCTGTATGGAATGTGGCTGCTTC
TGGAAGCAAGAGCAGAAATTACATCGCCTAGAGCAGAAAGCGACCTGTTAATATTTTGTG
CCTCCTTAAGCCGATCACCTTGAGCGTCAGTCTTGGCTAACCGCTCGCTCCCAGCAAGAT
CTACTAGCCAGAGTTTACTTCTTGTGCAGTCCCCATTTATCAAGTTCTTTGCTCTAACCA
TGATGCAGAGCATGCTGAAAACAAAATATGAAGATTAAAACACTTTGACCACAAGCAAGT
ATTCCACCAAGAAATGAAAAATGACTCTTTTGCATCTGAACATGCATTCAAATAGCAACT
GAAAAGGAATGTCAGAGGATTTGGACCAACCAGTGTGAGCGACTGCTGTGTTCATTCACA
TTATTTGACCCTACAGCCCTGGAATTGCTTCCAGTTTGTAAGGCATCCCAAACTTCGTTT
ATGTCCTCAACTTTGGCCTCAACTATGCCAGGCACATGATGGGATCCTTCACCTGCTTGT
TTGATCTCCAACCTACACGCAAAGACATACAAGTTACCACACCGTGTACCACTGTGAACA
AGAAGTGAAGGGTGTGCTAAAGGAAAGTGGATGCACTTCTTAGATGAACTCTTGTGAACA
AAACTGAAGGGTACTGACGGAAAGTGATTGTACTTTTTAGATGAAGGGGATGTTGCAAGC
AGATCTCTGATTTGTTCATTGTAAACCTCAAGGACACTAACAGATATGTTGTACGTGACA
GTATCTTTTCTCTCCTCGGCAATCTTGAACAACTCCTCCAGAGTTCTATAGTTTACTCCT
CTGTTCCTTTCAGTCCCTTCCATGGTGAAGGTTTTCCCAGTTCCTGTTTGTCCGTATGCA
AAAATGCATACATTGTATCCATCAAGCACTGACGTGACCAATGGAGAGGCATCGGCGTAA
ACCTCGGCTGTTCATGAATACAGCTTGTATATCAGACAAACAAAGAATTTTCTAATGGAT
ATCTCAACCATTACTCGGAAGCATAAACTAGAAGCAACCTATATTAGCATTATTCGCGTT
GTAAGAACAGTTATGGAACATAACAAAACGCTAATACAGGCTCCAAAGTAACGAGAGATA
CCTTGGTCATCCTTTGGTGTGTAAACTCTGTCAAACTTGAATGTCTTTTTTGTTGTTCCA
CCATTCATAATCCCAATGTCACCATCATTTGCTCCATCAAAATCTACCACACACTTAAAA
CCTGAAGATGTCTCAACTTTGCTCAAGGGGCGGCATCTACAGAAAACTCTAATATTTCCT
GAAAATGAAAGAGATGGGCAGAGTCATTATCCCAACCAAATTCTAGAAATGAGTGTAAGG
ATGTGAATACAGAGGGGGCAATAAGAACCTTTTGTCTCCTGGACAATATTATGAAGTTTC
TTTCTCTTGGCCATCTCTTCATGGTACTTCACTTTCAGATCATCACACTGTGCAACTGCA
ATACCAGAAACATGCAAGGCTTTGTTAAATACTTGAAAGCTGTGCAACAGTGTCACTTCA
GAGTCAGATATTACCTAAGGCTCGAACAGCTTCAATCATCTTACTCAAATCAGGGACCGC
TTGCGCACAGTCGTGTGCTTCAAGAGATAACAGTGCTTGCTCTTGCTTCATGGCCTGAGT
GAGTATTATGAAGATACAATTAGCAGCAGCTACTGCAATCATTCACTATTTCTTGTGGTT
GTAGTGATCTTGCAGACAGTAAATCAGCATTACCTTGATCTTGCTCTCCAGGTTAGATAT
GGCAGCAGCCCATAGTTTCTTGTCATTTTCGTAGTTCTGAGAGACTTTTCTAAGTTGGTC
TGTTTGCGTATCAAGGACTTGTTCTGCAAGTTATTGTATTATATATTAGAACAATGGTAC
CTATACGAAGAAAAAACAGGACAGGACGATGCTTAATGCATTAGTCTGGTAATTACCAAA
ATTATCACTTTGCACAAGCTTTTGGTGAAGCTCCATCTTCAGCCTGTCAAGTTCTTGGTT
GGTAGATTCTACTAAAGACCATGCCATGGAGCACTCATCGGACTTGCTGGTGCATTGGCT
GGTTAGGTCCTCAATCTGTTTCTCGTACTTTGAGATCAGTTTTATTGTCCTTTTCTGCAA
TTTGGGTACGTTGATCATGTATCAGGATTACATGAGATGAGATAGGATGGTAAAACAGTT
TGTGAGAAAACTGACCTGAATAGGTGAAGAAATCTCAACAACAGTTAAACACTTTTTGCA
TAAGCCAGTCCCTCGCGTACCTAACTTTGCCGCTGCACGTTCAATGCAAAGATTATCGCT
GGGAATGCAGGCTAGTGAATGAGGACATTGTTTGCATCTAAAACAAATCAAGTACCTGGT
GTTGCTGGGGCTTTCCGAACGCAGATGCCACAAACCATGGGGTTCCCTCTTACTCCCTTG
AAGTTGATGATGATAACACCATTGCTCCCAACATAAGCCCTGATGTCAAGCACCTGAAGG
GGCCTGTTACCTCCGACCACCGCGAACACATCAAGTTCAGACAAGATCTGTGAAGAAAAA
GGCAGACTGTTGTTGAGCCAAGTGTGGATAAGGAAACCATGCAACGAAACCTAACGAGAC
AGACAAGTCAGTGGGCTTGCCTTGTCTTCCTGCACGAGCACATCAAACGATCTGATTCCT
TTTGGCCCACCGGTGTGCACAATCTCAGCAAAATGCAGATCCAGGTAATAGTCTCCAGGG
GCAAGGCCATCGAATCTGTAGCTGAAATCGCCGTAGCGTGCCGAGCTGTAGAGCGACGGA
TAGTCGCCGCCTTCGAGTATGCTCTCGGAAGTCTCTATCGACTCCCCTCCTTGAAAGAAA
GAATCGCTGGAGAACTTTGCGGAGGGATCGTCGTCCTCGATGGCGCACCCGCCCGCATTG
AGGAACAGGACGCATTCACCTGCTTGAGAGCATTCACAGGCAGTAAAAAGGGTTATAAGA
AAATAATAACTTGAGACAGAGGTAGGAAAAGCATTGTAAGATGAGCAACTTGCATTTTAC
AATTTGTTTGGGAGCAATAGAGTAGGGCATAGCATGTGAAATGAGGTGAGAAAGGCAGGC
TTGGCCATTTTGGAGCAGGGTAGCAAGGCTCTGAAAACCTGAACCTAGGGAGAGAAATGG
GATTTAGATCCCTCTAGGGTGGGTTTATGAATCCGAGCCAACTCTAGGGCTCCAGCCAGA
TCCACTTGGCAATTCCACGGCAAGACCAGCGAAGGACACCCGCTCCGCTGGGAAGAAATG
CGCAGGGGAGAAACGCGAAAACCTAGACATAGCGGGCGGACGAGGACGACGGTACGCCCG
AGGGGAGCAGCACCTGCGTGGCAGTCGGCCCGCCTCAGCCCGGAGACGGCGACGCGCGGG
CCGGAGACGAGGATCATGG