Contig Data
morexGenes
Links



Map Locations of contig_44590 (4389 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44590

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60618 1 1723 bp AK248505.1 Available Available None





CDS Structure of MLOC_60618






Contig Sequence (4389 bp)

>contig_44590 4389 assembly3_WGSMorex_rbca.fasta
GCCATGGCGGCGGCGGCGGCGGAGGGGGACAACATCACCAAGATCCTGGGCGAGTACCCG
GAGTACTCGCAGTTCAACAAGCTGCTCACGCAGACGCGGCTGGCGCAGGACATCAACAAG
CGCCGCACCATCACCGTCCTCGTCGTGGCCAACGGCGACATGGGCAGCCTCGCCGGCGGC
GGCCGCACGCTGCAGACCATCCGCCACATGCTCCAGATTCACGTCCTCGTCGACTACTAC
GGCGGCAAGAAGCTCCACCAGCTCGCGCACGGCGTCACCGCGTGCTCCTCCATGTTCCAG
GTACAGTACTCCACCATAGGAATAGGACCATAGCCATGTACTCATACCCACCAGGCCGGC
ACCCTCCTCCTCGCTCACCGCCGGCCAGCCATACCGCTGCTGCTGCTAGTCCCTGCTCTC
ACTAGAAGAGTCGCCGACGGATAGACCCAGGCCCTACCCCGCCGGTGCCCGGCGAGCTGC
TCCGTCTTCGCCTCAGCTCCGAGACGGAGACGCTGACAGGTGGGGCCAAGCTATCCTCCT
GTCGGTGAGGCGCAAATGAAGGAGTTTATTTTGTCGGCACCGTCCATTTTAGGCTGGTTT
AGCTCTGAGCCTTAATCTAAAGTTACTGTACTGACATCATTTCATTGGACAGTTTTAAAA
GCTGCACAGCTCCTCCCGTAAAACATTTTCTTCTGCATAAAGAAAAGAGAAACGTCTATT
CTTGAAATAGCAGCATTCATCGTATGCTGTTTTTTCCTTATTAGAAACACATCTCGAATC
CATTTCTGGTCCATTTTCCCGGCTGCTCCTTTGCAGTTTGCAGAGAAGCAGCAGCATCGC
TCAGCTGGAGTTGTTCTTCGTTAAGTGGTAGTAGTTGGTGGCTGGGGTTCCGGATAGAAT
AGTGAAAGCTTGCTTTGCATCCATGGTGGTGGATGCCCTGCCCATACACTACACTGGCTA
AGGCCACTAATCATAGTCTAAAGCTAGAGACATAGTGCCAAGCAAACCTGGGCCACCCAG
CTGAGGAATTAATGGTGTCTTTGCACTGCCTACAAATAATATCGTCGCTGAAGGATACCC
ACTAACCAATTTTGGTCCGATACTGACATGACATGCGTCGCTTTCGAAGCTAGGCCGGGC
CGGCAATGGTTTTATTTTTATGCACTGATGTGATGTGGGTGCACATGCACATGCCGGCCA
GTCTCCCCGTTGGCCCTAAATTATTGAGCTGCGTGATTATGAAGCTGTCGAGTGTGTGTA
GTGTAGCGTAGTGCACAACGGTCGCCGTGAGTTGAGTCGATGAAGTGGCCTTTCTGCCGA
TTTTATGGTCAATCATCGACCCATCGAATCCCTCGGCTAGCGGGTCATTAGAAAATGATG
GGAACTGGAGCTCCCCAGGCTGGATCTCGGCGTTTTTTTAAACTACTACTGTAGTAGTTT
AAACCTTGGAGTGATAGATAAGATTGCCTCTTTGTAACGGAGTGGAGAGCGTGTATGTTG
CCGACTTGCTGTCGAGTCAACAACCCAACCACTGGTTGCTTCACGTTTGTCTTTTTGAGA
CCGAAATACTGTACTCCACGTTTGTAATAATTTTGAAATTATCACTCCACATTTGACATG
ATGGCAGTACAAAATTAATTGGTCGTTATTAGACGCCGAATTGAATAGGTCACCATCAAG
ATTGCTGTGGAGTACAATCCTTTGTGCATGAATTAGGTGAGCTTCATTTGGTCCGTGCAG
CATCAGCTAGCTACTACATGAATTCCCATCAACTCAGCTGCAAATGCTTAATTACGCTCT
TTTTGTTAGTACGAAACCTTTCTTAGTTGGCTGCAGTTAGCTCAAATGGATTAGTGGTCG
TGGTGCAGGAGTCCGGCGCGGCCCCCGGCATGTCTGGGTACGTGAACATCACGCAGCACC
GGGGCGGCAAGGTGACGTTCACGGCGGAGGACGCGGAGGACAGCGCGCCGTCGTCGGCCT
TCGTCAAGTCCGTCAAGGAGATCCCCTACGACCTGGCGGTGCTCCAGATCAGCAAGGTGC
TGGCCTCGCCGGAGGCCGAGGCGCCCGTGGCGGCGCCGGCGCCGGTCAACATCACCGAGC
TGCTCTCCAAGAAGTACTGCAAGAGCTTCGCGGGCCTGCTGGCGGCCGACGCCGAGGCAT
ACAGCACCATCAACGCCACCAAGGACAACGGGCTCACCCTCTTCTGCCCCGTTGACGCCG
CCGTCGCCTCCTTCATGCCCAAGTACAAGAACCTGACGGCCAAGGGGCGGACGGCCATCC
TGCTGTACCACGCCGTGCCGGACTACTACTCCCTGCAGCTGCTCACCTCCAACAGCGGCA
AGGTGAGCACGCTCGCCACCTCCAACGTCGCCAAGAAGGACTACAGCTTCGACGTGGAGA
AGGACGGCGAGACGGCGGAGCTCGACACCAAGGTGAACTCAGCGTCGGTCACCTACACCA
TCAAGGACGACGACCCGCTCGCCGTCTACGCCATCTCCAAGTTCCTGCAGCCCAAGGAGC
TGTACAAGGTCGCCAAGGACAAGGACCTCGCCCCAGCGCCGGCGCCCGAGGGGCCCAAGA
AGAAGAAGACCACCAAGAAGAAGCCCTCCGCGGCCGCCTCGCCATCGGACGACGACGACG
ATGACTCCGCCGCGGACTCGCCCGACGACGACTCCTCGTCCGACGACGCCACCGCAGACA
AGGACGGCGCCGCGCCGTCCGCGGTCGCCGGGTGGGTGACCGCCGCCGTGGCCGTGGCGT
CGGCGCTGGCACTGGCAGCTTGATAAGGTGTGTGAACTGGTGTGTTTTTGTGCTGAGTTC
TCCGAAAATTCGTGGCCCTTGTTATTCAGTGCGGAAAATAAGAAGGGCCGTTTCATTCGT
ATTTATTACTGCTGCATGTCCTGAAGGAAAAAAGAAGGGAAAAGACAGGAATTTCCAAGG
TTTTGTTGTGATGATCATTTTGTAATGATAGTGGTCAATGGGACTGGAGTGTGCGTGTTT
CGTTGTGTTTATAGTACTACTACTACATATATGAAAGACATCATGGAGTTTTAGAGTGAT
GTAGTGCATTTTCTTAGTTCTACCAACTCTACTTTTGCCTTTTATAAGCTGTTCATATGG
TGAGCTTTCCCGAGCGGCTCCTAAACTTGCGTGGAGAAGTGGAGCTTAGCTTACCATGTG
ATCGGTTGATTAGCTTTGCTTGTTCAGCTTGTAAAGGGGACGATGCTACTGTTTAGGTTT
TGTTTCTGCGTTGCCCGGCCGCGCTGGACATCATAGACTAGTATATATATACTTCATCCT
TATCAAAATATAAGTCGTTTTCTGATATTGTTATAGTGCCAAAAAACATCTTATATTTTG
ATAAGTAGAAGTATATATATCGTTGTTAAAACATGCTCGTACGTGAACACTATAAAAATG
AAAATTAAACCACTAAAACCCTCCCGCATGATTAAGTCTTTCTAGTAACCACTGGAATTA
TGTTGAGCCAGCAAGCAGCCTTTAGCCTCTGTGCTGTGCTCCAACTTCAGTTGCCAATAA
TACTTATATAGCAGATACTCTTCACATCCTGAAACCACAATACTACACTGACTGTCTCGT
ACTTGCATCAGCAGCAGCTTCAGTTGCCAAATAATACTTATATAGCAGATACTCTTCACA
TCCTGAAACCACAATACTACACTGATTGTCTCGTACTTGCATCAGCAGCAGCACGCGAGT
TCCATATCCATAGGCATGGGTCACTAGAACATAAGGCCCATTCTTGCTTCTATTCAGGCA
TCATCATCTTTTATCCACACCAGAGTATTACATATCTTGATATTAAAGCGCATCATTAAG
CAAAGTTAGCGATAAAACTTAAAAATAGGCCTGTAGCACTCCGATGTCTCTCTTAGACAC
AAGACCTAGCATTGCGAGAGATGTTGTCGTCATGTCAAGTGCGAGACCTTTCACACTAGT
CTCTGTAAAACGTTGTTGATGGAATAAAATCTATCTATTGTTGTTCGAAAAAAAAAGCAT
GTGTTCTTTTTTTCGATCAACGGGGGATTTAAAACGAAACCATACCAGACATGTTCAACA
TCCATAACAAGACACCAACGCAAGGGGGAAAACTAGCATATATATAATATCTCAGCGTCA
TCGGTACCTTATACTACAACCTTATGCAAGGGGGAAAACTACCATATATATATATATATC
TCAGCGTCATACTACTACCACTACACCACGGCTAAGTAAAACTACTAGCTCTCTCAACAC
AACCTTATACTACTACTCCAAGGACACCCACCCTTTACAAGGGAGCTAGGCCCTGGATCT
TGTCACTCATCGCCGGATTCTTCATCCAAGTTAGCTCCCTCGTAAGTCAAGGGGGGGGGG
GGGGGGGGG