Contig Data
morexGenes
Links



Map Locations of contig_44398 (4406 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44398

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60443 3 1066 bp MLOC_60443.3 Available Available None





CDS Structure of MLOC_60443






Contig Sequence (4406 bp)

>contig_44398 4406 assembly3_WGSMorex_rbca.fasta
AGAGAGAGAGAGAGAGAGAGCATTTGCCTGAAATTACAGCGTGAAAATGAAGATAATTCA
TGACATTAGGGGAGTGGGAGGGCACATTTTGGGAAGTGACGATAAATGAGATAAGGCGAA
TGCCAAGGTAGTGAAATTACAAATTGCTAGCAAATCGAAATTAGTGTGAGGAGTGATATG
TATATCGCTTCACATTCTTTGAAACCAATATACATCTCTTTCATGGGATGACACGTTCAA
GGACAGAATTTTATCGTAATGCAAACTCTATGACAAAAATTATATTTGCACGTAGAGCAT
GAAAATCTATAGAACTAAAAGGTTCCGCTTGTGTGAGACAACAATTCCTTGCAACCAGTA
TAATTCCTCGCAAGAGAGAGCACGGCCCACAAGAGTGAAGAGATGTGCACCGCGTAAACT
TTTCACAGCTTTTCTTCTCCTTCTATTATTCGTTCAAGGTACAAGGTAGTGACCTCGCAG
CCGAAAATCGCTATGACCAATGCATTCTGCATCTTGTTGTATAACGACTCGGTTCATGCA
GAGACTTGACGACCTGTTAGGGCGCGACCCGAACAGACTCGGCGTCGGCCAAACTCAGAC
GAGACACGCCGTAAGCTCACAAGCCGCCACAAGGCATTTATTTAGAAAGCCAAGCATAGT
ATGTAGTAACAATATACTTTCTCTGTAGCTAAATAATTATAGTTGAGGAAAACTAGACTA
GTTCGTTTCAACTGTAATTATTCACGTATAGAGGGAGTAAAACCGTGCATCACTGTGTTT
TACTATATATCGGCAACGTGTGCAAATTTATTCATGGTACGCGGACTTATTTGTAGTATT
TCCGTGGTCCAAGTGTCATCATCTCCGGCCTATCATGGAGGATACCCATTCCCATAACCA
CCACCACCGCGCGGGTCCTTAACCGTGTACCCCCTCACGTTGCTTAAAGCACCTGCTGTA
GGTTCAACAACAGTCAGATTATAAGTTACACTTACTTATTTTAGACACGAGCTAGGAAGA
GGCGAGTTGATGATGATACCTCTGGCTGCGAGCGCGCCCTGCGCCACGAAGGCGAGCGAG
GCCAGGATCACGCACAGGTACGCGGCCAAGTTCTTGAGGAGAGCCATATTGTTGAAGGAA
ATAAGTCGCTTGTGTGTTTCGCTGTGCTTGGAATTGCAATGCCAGTGGCGTATTTATACG
CAAATCAAAGGCAGCATGAGGACCAGGAGCAGGGTACCAAATCGTGGGACCAAGATCCCC
ACCCCCCACCACTAAACTATATGGTCCGGCCCACCATATAGTGCGTTTTTGGACGTGTCG
GACGATAGAAAATGACCGGTCACCGGCAAAAGTCGTCGAGAAATCAACGGTTCTGTCCAT
CGATGATGCTTCAGGCTGCACCATGGGAGTGGGCTGTGGTATGACTTACTCATCCCACTT
AAAAGAGTTTAGTGGGCAGGGCACTCGGAAACACAGTAAAATTTTGATGTGATATCTCAA
ATAACCCACAGGGAATCTATTAGACACACTTCTTCTAGAGAACGAATTCGCTATCTTAAC
TTTATCACAAGCTGAATTCGATATGAAAGTATTTTACAATGTGACCCTTTTAATAACATC
ATAGTCCATGTCGTTCCTGTCCAATATAGAACCGCCGAGCTAGATAGCGTTTTTTTTCCT
GGCCCACGGCCAAGCCGAACACGCATACGTGACAGGTGACAGGCTAGAAACGCCGAGCTA
GATTCCATTTTTAAAAACGCCATTGACCCTTGCGTTTCTATGTAGGGCAACAACTCCAAA
TGCCTTGGCGTTTCCAAACAAAATTGATACGCCAAGGCCTTTGGCGTTGCTACCTTACAT
AGAAACGTTAAGGTCAATGGCGTTTTCAGAAAAAGGCATTCAACTCGACGTTTTTGGTCT
GTCACGTACGTGTGCTCGGTCTGGCAGTGGATCAGGACAGAAACACTATCTAGCTCGGCG
TTTCTATGTTTGACAGTAACGCGACGGGCTATGGTGTTGTCAAAAGGGTCAGATCATGAA
ATACTTTCATGTCAAGTTCAGATTGTGACAAAGATTGTTGAGAAGGTGAGAATATAGATT
TCGTCCCATTCTAGGCACCCGATTAGTTTTCCTTTTCCGATTAAGAAAATACATTAATAG
GAAGATGATACAAATTATAGTCTATCTCTGCATCAACAAAATATCAAAGGACATCATTGC
ACACAATTTTTAAGAATAAAATTAAAATGAGATAAAAATGAAAAACAAAGACCAATTGCA
ATGATGAAACATTAGCAATGTAGACACCACCAAAGACAACACCCAGACCATAAAAATGAT
TCTCCAAAAACGACGCCTTCAAAAATGAATCGATGCACAAGCGTTGTTGTCGGCTGATCA
AGATTCTTGAGTTTTCACCTTGAAAAAAGTCGGAGATTCCCAAAACAGTGCCTTAGGCAA
GGTCATTGTTAGGTACAACCAATCAAGGTCACACCTTGGGCTTTCACCTAGAAATCGTGC
CTTGGTACTCGAGAAGCACCACCGGAAATATTGTGTACCTGATTTGCCGCCCTCTCATGT
AATGGCCGCCACTGCAAGTCCTCAACACCCGACACATAGAAAAAACCATGTGACGCCACT
CTTCATCACAACCAAAACATCTCTACGCCATTACAATGCTCTGTTCGTAGCCACCATGAC
TTTCTTCATCACTGTCAATGCCATGGAAATGTATACTCCGACATGAACCATGGCACTGAC
AAGACAACAAAGTTTCATGCCATGTCCTCATGAAGCCTCACTGGCCGAAGATGAGCACAC
GCCCGACCTGATCAATTCTGATCTAGATATCCAGTGGTGTCATGCGCAAAAAAGATAAGA
TCTTCAAGGGGAAGACCAGAACTCGTCAGTGTCCAGATCAAGGGGGCTGGCATGAAGAAG
ATCGGCGTTTTCAAGCACAACGAAAATCAGGGTCAACCACCTTTATTCCAACCGAGCACG
CCTACCGGCCATCCACTGGATAACCGGACTCAAGCCGGCATGCTCACCGGCTCGCCGATG
AGGCGCCTCCTGTTGGGGAACGTTGTATGAGAAATAATAAAAAAAAAACGCACACAAAGA
CCCATCATGATGATGTTCATCTATGAAAGACATGGAAGGCATGGGTGGCTTCGGAGCTAC
CATGAACGGGTTTGAAAAAACGTTACGGTTTTGACAAATTTTACAGGCTCTATTCGTGGT
GTTTTTCGACATCATGAAATTAAAAGTGTTATTTTATTTTACAGATTTGACTATTTTTAA
GAAGTGATTTTAGCAACGAATTCGATCGCCCGTTCAAGATGCGCCAGGTTGCGCTAGTCG
TCGGCTATTTCCACAAAAAGTCGTTCGAGGCCAGCGCATTGACACACCGGCCACGCACGT
CCTTTTCTTGACCGTTCCGGGAGCAAGGAGCCAAGGAGAGGTATATACGTCCTGGATGCT
TTGTTTATCATGAGCGTTTTTGCAACGCTAAAATGAGAGGTGTGCCGCGCTGCGGTTGTC
ACGGAGGGCACGTGCAGTGAGTCCCGTGTCTGTCCCCACATTGTGCCCACTATTTATACT
AGCTAGCGATCGAGCTAGTGGCTGTATCTACTTGGACATATATATTTGTGTGTGTGCGCA
CGAGTCCAGGAAGTCTGCGCACGCGTAGAAATGCAGCAGCGGATTCAATCACCCGTTGAA
GATGCATGCGGCAGGTTGTGCAAGGCTCTGCCCTCTGTGGGCGGCCATTTTCCTCAAAAA
CTCCGCGTTCAAAGCCTTACATGGCAAAAAAATATTTCCTCCACCAGCACCACTCCTACC
TCCACCTCAACCTTCACCACCACCATAAAAAAAGCTTTAGAAAAACAACCACGAACTACC
CATCACGAGTGAGATGGATGGTTTGGCTGTCCTAACCTTACACAATAAAACTAAGATGCA
AAATGTAGGGAAAACGGGTAAGTAAGAAGAATAGGAGATCTTTTATGTGGGAAGAGAAGG
AAGGAGGAGAAAGAAAGAAAGGAGATAAGGAAGAATGAAAGAAGGAGGAAGGAGGAAGGA
GAAAGAAGGTGGCCTAGCCCTGGCCGAGTGATCCAGCCGGCCTGGCCGTAGCCGACTGGG
CAGCGTCGACGTGGCCTGGCCGCTTATCGGCCAGCGTCGACGTGGCCGACAGGAGCCTTA
CACAGTTACGTTCTGGGAGGAGAGCAAGGAGCCTTACACAGTTACGTGTGTTTACCCTGA
GCCTCTTTCCACGGCTAAGAGCATCTCCAACAGCGGCGCAAAAAGGCGCGCGCGCTAAAC
ATGCATTTTGCCGCGCGCGGGATAGATTGGCGCGCTCCAGCGGCGGCGGGAAAACCGCGC
GGGCGGGAACCGCTTGCGCGCGCGCG