Map Locations of contig_44355 (9564 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_44355

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60408 1 965 bp None Available Available None
MLOC_60410 9 4724 bp MLOC_60410.5 Available Available LOC_Os10g21470.2, FRAME:-2, EVALUE:0.0, 13110.m01778 protein pentatricopeptide, putative, expressed
MLOC_60409 3 1419 bp None Available Available None





CDS Structure of MLOC_60408






CDS Structure of MLOC_60410






CDS Structure of MLOC_60409






Contig Sequence (9564 bp)

>contig_44355 9564 assembly3_WGSMorex_rbca.fasta
GCGGAGAAGGAGCCCAAGGAGGGCAAGTCGCCCAAGAAGGCCGCCAAGTCCCCCAAGAAG
GCCGACAAGAAGGCCTAGAGAGATTTGCTTAGCCCCTTGTAGTGCTCTGTGGTAACATTG
CTTGCTGTTTCGCTAATGGTGTCGGTGTAGATCTGTGCTGCGAATGTTAGAAATCTCTCT
GATTTGAGCGAATTGTTGACAAATTCTTCTCTTGTTGGTATTGCAATGTTAGCATAGGTG
CGGTGGAAAAGCTCAGATCTGTTCGAATTTGTCAACATTTCTCTCTCGTGGTACTGAGCG
GAGTTCTTGGAAGGTTTCAGCGATTGCCAAGATGAATGAAGTAAACCGAAATCGATTGAG
ATCTACGCGAGATCCCCACGCAGAGTAATTTTGCAGGAGCAGCGTATGTAATCTGTGGGA
GAAGCCAACCACGAGTCCCTGTAACGAAAAGCGGAAATGAAGATCTAGCCACCTCCAGAA
ATCACCAAATAAACAGAGCTATTTACTGTTCTCCCATGCTTTCTAGCTTTAAGGTCATCT
CCGACCCATGCTCGTGATTGGAACCAAACATCCGTGGACGTGTCCGGACTGAATTCAGAT
TGTCAGATCTCACCCTAATAAATTTTTAATCGAATTGGAAGGAATCATTGTTTGCACTGT
TTGTTCCCAATTGATGTTGGGCACATTCCTATGGTGTCTTATTGTGTTTTGTTTTGGCAG
GGTGATGCTGATGGCTCTCTGGACAGTCTGTGGCAGGAGAGGAAGGCAGAGACGAAGCAG
CTCTAGATCTCTGCTGATGGCTCTCTGGACGGACAGGCTGTGGCAGGAGAGGAAGGCAGA
GACGAAGCAGCTCTAGATCTCTGCTAGTTGTTTTACCTGGAACTTGTTTCACTGTCATGT
CTACCTAGCTCTTGGGTGTCTGGTTTCAGTTGGTACTACGGAAGAAGCTAAGATTTGATG
TCACTTGGCGTGATTTCTTCTCAACATGATTTGAGTTTAATCTGTTTTGAATGGTTGATA
TACTCCCCAAATTCTCTAGATTCATCTCGTTACTTAATATTATACTGAATTGCTGATGAT
GGACCCGTACTTTTACTACAGAGTATAAGTATAATATATCGGTACAACATACAAGCTTTT
CATGAGTATCAACTGTCGATTCTCGTTGGCGTTTGTCTGGCATCGGTCGGCGCAGGCCTC
GGCATTTGCTTGCGGTGAGGGCTACATCAATGATGGAGTCGGAGTCGCCCTTGTGGAGGT
GTGAAGCCTATGGAACTGAGTTGCAACCTCGACTGTGTTCTCTCCTCGACAACGTGTGTG
TTCTTATGTGGGTGGCCAGGTGTTGTAATGGTTTTCTGTCAATCAACTGAGCAATTCCCT
TCTTATTTATTAATGAGATGAGGCAATGCTTTTGCCTCCGTTTAAAAAAAAACTGTCGAT
TAAACTCTCCAGACTTCCTAATCTTGCTATTCTTAGTTTGCAAAGCATGTACTCAAGTAA
AATCCGTAGCATATAAATGTAGTACGTTCTTTGGCAAATTCATAGAAGTTCAACTCAATT
TCTTACACCGCAACTACTGTTTTGCCGTTCAATTCCATACAAACATTGTGCCGCGTGCGC
AATGTTTCAATCGTCCATCTTATTATTCCATCCAGCATCCACACACTATTTACATTATTC
AGGCCGATGATTGATTTGACGCTAGTGCAATCATCCACACGGGCTTACTTAATTTGCTGG
CGCCTTGTTACCCCCAGCTGCAAACGGCTTGCGAAGAAACTCCCGTGCTATCTTCCCGTT
TGCGCCCTCCGGGAAGAAGCCACCGGGCACGTGCTCGTCGCCGGTGAGGTACAGGATGCT
GAGCAGCTGCGCCGGCGTGCGGGCGTAGGAGAGCGAGTCCCTGTCGGCGGAGAGCACGTT
GGTGCAGATCCTCCCCTCCGCGCCAAGCTCGGGCGGCACGGTCAGCCCCTCGTCCTTCAC
CCCGCACTTGCCCAGCTGGTTTCTCGCCGTGGAGATGCGGTCGGTGAACTCTGCCACCGT
GATCCCCTTGTAGGGCGGCACCGTCTCGCTCCTCCGCTCGAAGAGCAGCGCGCGGAAGAC
GGCGTCCTGCGCCGCCTCCACGCCAAGCAACCCTGCAAGAAGCTGCAACAAACACAATGG
CCTCAGCTTAACTTGTGTGTAACTTGCAGGTTTCAAACTTCCAATGTGCATGGACAACGA
TGCTGGATGATGGATTTGATTACCTTTTTAGTTGCGTAGCCGTCGATGATGGGGTTGGTG
CCGGTGTAGCCGTTGATGCCCAGGTAGGGGATCACGTAGGACGCCAGCAGGAAGTTGAGG
CTGTCGACGTAGGGGTCGAAAGGAGGGTTCAACTGGTACCCAAACGCTTGGTCCATCACC
CTTGCAAAGTTCTTGGCACTCAGGTCTATCTTTGGCCTAGGAATCCCACCAACTGTGTTC
TGGATAGCCCTACAATGAAAACAAACCGCAAGACATGGATTTTCAGTACCAACTTGCTTC
TATCCAAGTGTATCAATTGCAATTCGAAATGGTGACGAGGAGCAATCGTTGAATGACATC
TTTTACACACCTCACGTGGCCGACTTCTTGAAGGCCAAACTCCGCGGCGATGCGCCATGT
CACCTCATCGAGGTTGGCTTTCATGGCGCCCACCGGAGGCGGACCCCCCAACGTCAGGTT
TGGCGCGATCTGGTCGAGGCCTTTACCGAACGCTGCGTGGAGGAAGAACTCGGCCTCCGT
GTACTCCAGGTTCAGAGCGAACTGCATCGGGTCGACGTCGTACGAGAACACCGGGACCGG
AACGTGCGGAGCCGGTGGCTGGCACCGAGGTCCACTGCAGTCGGAGGTTTCCACCGCCAC
CGCTGACGCCTTGGCCGGAGGGCAGGTAGGGTCGACCGCATGGCCGGATGATGCCCTGCA
TGAACAGGCTAGGAGGAACAAGAGCAGGAGAGGAGCGTAGGTGTGAGTGTGAGTGTGAGA
TGATGCCATGGCCATCTTAACTGAAGGTTTACGCATCCGAGGATGCTGGACAGAAGATAC
ATGGTCATCTTTGCTGAATTTATATCGAATCAGCATAGCATATCCAACAATCTGGAGGCT
GCCCTTCTGGAGCAATCAGATAACTACCGTTCTTTGACGGTGATTGTTGCCGAGTTTACC
TCCTTCTGCAAGATGACTTTGTGTGCGAGAAATATAGATAGCTGACGCTTGGAGGTATCT
GGAAATAGATTACTTGTTGAAGCCAAGAAGCGAGACTCACAGACAGATCACTTTCTTCCG
AGTTCAGGTGCTTCACTTCAAATTGGATTGCCATGGTGCATCGTCTCAATTTTCTTCAGC
CTATATCTGTATCACCAATGGAAATCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCC
TGGAATATGCAGGCCGCAGATGCTATTTCTACGTGAGAGGTCAGTTTCTGCTGATCATTT
CGTCAAAAATTCCTTCACTGATGATGTGTTTATAGACGACAGTTAATGCTGTTGTTGTCA
GGGTGTACGGAGAATTCAACTCTTTCCTTGTTTGTAGTTTCCCATGAGGAACGCCTTCCC
TTTGCTGGAAACCTGCAGCCACATGCACCAGCTACCTTCTTGACTGGAATGAATCACACA
ACACAATACTGACCAGCTGATTTTATGTTGTGGTTAAGCTTCGAGCTTAGGCGGTGATTA
AACTGTCACCTTTCTTTTTTCCCATTGGGGAAAAGCAAATGCTTATACGGTTCATCTTGC
TTTCCAATGGTCTTGCGAGGTAGCAGAAGAAAGCGGTTAGCGAAAGCGAGCTTAATTATC
TCACACCTCCAAATTTAAATTAATCACCGCCAGTCAAACTGCAGGCATGCTTAAAATAGG
CTCAAAGCCCCTAGAACCATGATGGCCGGCTTGGATGACAGGGGATGAAGAAATGAAAAA
GATGGGGTGCTCCAGGTGATCATCTCTTAGCATGCAACATCCTATCCAATATCAGACCTA
ATGAATTTCTACTCATTGCCATGAAGATCTTTTACAAATAAGTCCTCTGCGGGAGGTTGC
ATAGTAAAATTCTACCAAAAAAAAGGTTATAGGCAAGTTAGAAGAAGAGTTGATGATTCG
CTTCACTCCATGAAACCAAGTAAATTCAAAATTCAAGCTGGAAAGTGTAGAGAAGTAGCA
CAGACCAGTGGAGGGAACACTCTCAGCTGCTCGATGGGGAAGAGAGAATCACCACGTGTG
CTTGTGTCATTTGCAGTTAATGTTTTGCAAAAATAATTCATTCGCTGTTTGTTTGTAGAT
ACGGATCCTTAAACAGTAGTTGAGCTCTTGCTGAAAAGAGAAGCAATCTAAAGTTACTCT
CTTGGATGCCGAGTTAAACAAAACTTGCACATGGTAAATATGAATTACCGGGTTAAGTGG
TTGCAGGGTCATCTGCACATAGACACACATGGTTGTTTCCTGGAACCGAGAAAATATGCA
CTAAAGCTTTTCCTGTTTTCTATACACATATAAGGATATACTTTCACTCTATGACTCTTT
CTTTCCTACTAGATTATAAACTAATTGTGTATACTGCAATCTCAATTCTGAAATATATGT
TACTGCTGATGCCTGATGGTGAAGCGTGTCTAGTCGTCTACCCATCTAGTCATGAAGGAA
TGGCTGGGTGAGACGGGACGGTCAAGGGAAAGGTCGCCTGATGGTTCAGCGGTTTTCTAT
CTGATTGTTTTAGCATTGGTGAGCCGACGCTGAGAGCTCAGACCTTTCGCACCACTTAAA
ATTGAAGGGAGAGGAAATGCAACAACAAGAAAGCCTTTCTATCCCAAGCAAATTGGGTAG
GTTGTGTCCTCCTGTTATGCATTCGTCTGCATTTGATTGGTTTGAATGGTAGCAGGTGAT
CACTACCAGCCCCTCTTTGATTTAACATGATCAGTTTAGAACTATTTGAACGATGCGCAA
ACCACAAAAAGGAAATGTAAAAGTTACAGGACATCGTCCAGAATTTTCATGCTAACTCAT
ATTTACACTTCTCAAATTTTGACAGAGAATCAGCCAAAAATAATTGTTACAAACAAGAAG
AAAAAAAAGGTAAGCACACCATAAATGTCGACAGTCATATTTGATCTGAACAGAAGACTG
AGATAGAAAATTCAAGCAACACATGGGGAAAGGCCTCCCTATCAACTAGATTACTTAGTA
CAAAGTGTGTGTGTTTGAGCTAGCTATGGGTGTATTACCTTAAATTTAAACAAAATATCC
AACAATTAAGTTGCTCCTTTGCACTTCCAGAGTTCCAGCTACTTCACGGCCTCCATAGTA
CTCCAATGATGCGCTTTTCTCCTTCACGGTTCAGCTCTACTGGATTTTCTCCCTTTACAT
CAGCAGTCACTAACATAAAGAGTCGGCATATACATTCCAGGTTCCAAATTCAGCAATCCT
TTCATGAGACTCTTTCGATTTAGTTTCACCATCCCTTGGTTCTTGTAACCATGTAGAGAT
CAACCGATTTTTATTTTATTTTACCATGCCATGGAAAAGTAATCACATGTTCAGTGTCTA
GTAACATCGTGTCAAAGCAAATATCAGGAGATCCATTTATAAACCTTCAATCTGTGACAA
AACATGAAGCTGGATTGGTAGAGCTAAGGAAATCCCAAGTATAGAACATCACCCAAGAAA
CAATCTTCTAATCATGAAATCCACAAAATAAATGGTCACATAAGCTATCTTCAGGGGAAT
GCTTGTCACGGTACTGACGATGCCATTGCATCTCCATTCTTTCTCTTCGGTAACGGTCAG
AGTCCTGTTTCCACCCAGCCTTTTGTAAGCCATATATCAGAACTTCATATGTACCCGCAG
AAGGAGATATCTCATTAGTTATCATTTGTGTGAATAGTTCAAGAGCCTTATCAACTTCGC
CAGCTTGAAAATAGGCATTCATAAGGGCAGTGTAGGTAATCACATTCTGGTCTGCAGGTG
ATAACCCAAAGATATGCGCCGCGTATGAAGAATGCCCAGCAGCACCCAATCTGAGTATTA
AGACAGATAACAGATATGCTCCAAGATTGCAGCCATGTTTAATCAATCTTTCAACAATCT
TAGATACCAAATCAAACGAACCATTTCTGATGTATTGACCAAGAAGGCAACTATATGCAG
ATCTGTCAAGTTCACTGCCTACTCTTAGGCTATAATGCAGAACAGCGAGTCCACATGATG
GTCTGCAGTTTGCGCAGCTGGCCTGAATAATATCAGATAGTATATGCGATTCAAACTTCA
CATTCCTCGTGGTCAATTCGTTTACCATTTGTTCCATAGCAGACCAGTTTCTAGAAGCCA
AAAGGTATATAATCGTACTTCTGTCAGTAATGTAGCTTAGATGAGAAAATGTTGGGTCAT
ATTCCATTCCTTCGGATGCAAGATGAGGATTCACTTCCAAAAGAAGATTAGCATTCTCAC
CACTAGCTTTTAGAGCCTCTAGTGCTTCCAGAAAGACAGGCCTGCGGAGAACGATGCGTT
TCTCCTTCATGTACTGAAGAATGAGGGTCATCACTGACGTCTCACCAGCCCTGGCACACT
TCTTGACTAGAACATTGCAGAGTGGCTTGTCAGGTTCTACGCCTGCATCTTCCATGTCAC
TCATAATTCGTAGAGCAGCTTGGAATTTTCCTGATGACAACCAGATTCATGTCAGTATGT
GATGGTCCGAGGATTACATCTTGCAGCACAAATGAACATGAAAATCGTATTACAAAAGTT
GAAAAAACCGGACAATAATGTCCAAGGCGGACAACTATAACTTATGCCAGTGTACATGAA
CATGAAAAATCATATTGGTGGACGAGCCGTCCGTTCAAGCATTCCATCGAACGAACAGCA
AGCCGCGCAGTGAGTTCACAGCACAGGAAAGCAAGAAAACGCCTAATGGGCATTTCGTCG
AGCACCTCACCTGCGTCAGCGAGGTGCTCGATGAGCACGGTGTAGGTGGTGCAGCTGGGG
CGCAGCCCCTCGGCCACCATCTCCTCGAACACCCTCCTGCCCTCGGCGGCCCTCCCGGCG
TCGAACAGGATCTTGAGGCACGCCGTGTAGCTGACGAGCGTGGGGCGGCACCGGCCCCTG
CGGGAGCGCATCTCCTCCCACACCCGCATGGCGGCGTCCACGTCCCCGGCGCGCGCGAGC
CAGTGCATGACGGTGGTGAACGTGGCGGCGTCGGGGTCCACCCCGGCGCGGAGCATCTCG
GCGAGGAGGCGGAGCATGGCGGGGACCCGGCCAGCCTCGCCGAGGAGGTGGAGCATGGAT
GTGTAGGTGTAGCGGTCGTGGCGGAAGGCGGCCCTGGGGTCGGCGGCCGGGGAGGCCGCG
AGGCGGAAGAAGAGGAAGGCCTTCTGGAGGGGCGGGTGGGTCTTGAGGACGCGCGCCACG
ACGTGCGAGTCCCAGACGAGGCCCGGCAGGGAGAGCAGGAGCGGGCGCGCCGCCGACCAG
GGGTGGTCGCGGAGTATGTTGGTCACGCGCCGGACGACGTCGCGGGTGTACGTCGGGGCG
GAGGGCTCGGCGGCGGGTTTGGGCTGGGGCTTCGGGAGCCGCCGGGGCTTGGCGGGGAGG
AAGTGGCGTTGGCGGCGGAGCATCTTCGGCGGCGACGGGGCTGCTGAGAATGCGACGGGG
AACTGCTATGAATTTCCTTCTCTGTGTTTCAGGTCTAGGATTTTCTTTTTGAACACTCAG
GTTGGGGCGCCCCTATGTCTCGCCTGACGCGAGATAGAAGCAGACGCCCAAATGGGCAGG
CCCAGCACAGCCAGGCCTTCAGCGCAATTTTTAGTTCCGTTTCCTTTTATATTTTTTGCA
TTCTGTTTTTTTTTGCTTGTATTTAGAAATATTCCGAATATGTCTATTGTAAAAAAATAC
TCCCTCCGTCCAGAAATATTTGTCCAAAAAATAAATATAATGAATGTATCTATAACTAAA
ATAATTCTAGGTACATTCATCCCTAGGACAAGTATTTCCGGACGGAGGAAGTAATTGTTA
ACAAAAGGTGAAAAATGTTAATTGTATATTAAAAAAATGTTAAACGTGTGTAGAAAGATG
TTTCTAATGTGTATGAAAAACATAGACATAAAACAAATATGAAAATAATGTTAGTCATGT
ACTCAAAAAATATTAAACATGTATATAATGTTCTGGTGCATACAAAATAAAATAAAACGT
GTATGTAAATAAGTAAAATAAAATGTAAATAAGTAAAATAAAAATACGATTTTTACAAAA
TGTTATTCATATATTTGGAAAACGTTAAATGTCTATATAAAAATGTTCCTGTTGTATAAA
AAAATGTAAAATATGTATGGAACAAGTAGACATAAAAACATGTACATTTTCAAAAATGTT
AATCGTGTATTTAAATAATGTTAAAGTGGTATATAAAAATGTTCCTGATGTATACAAAAA
CTATTGAATCTGTATGTGGAAGGTTGATATCAAAATATATGTTTGAAAAAAATGTTAATG
ATATATTTGAAAAATGTCAACATGTATAGGAAATAATTTCATGTAACTGGAAAAAATGAT
AAATGGTTATAAAAATATATTCTTGCTTTATGCAGAAAGTTAAAGAAAAGGCCAATGAAA
ATTGGCAAACGAAGGGAAAATCAATTAAAACCAGTGCGAAAGAATGCAAACAATAAAAAC
CCAGAAAGAAACAAAGAAAAAATAGATAAAAAAGCATATAAAAAGCAATAAAGAAAACAT
AAGAAAATTAAGAAATATGAAACAAAAAAAGGAAAAAAGAAAACCAAAAAACAAAATTTG
AAGAAAAAGAGAAAAATCTAGTTAAAACTGAGAAAGAAACCAAATAACCCAATGAAAATG
AAAGAAAAAACCAAAAACCCCGGTGAAGAAATGAAAAATAAATAAGGAAAAACGAAATGA
AAAGAAAACAAGACAAAGGAAACTAAAGCAGCAACGAACCAGAGCTAGTGGCGAAGGTAT
GCACATATATGGGTTGGCCCAATACTATAGCTACAAGGAAATCATTCACACGCGGGACTT
TTTCCCATCCTGCCTTGAGCGAGATATAACGCCATGCTCAAGTTGATCTGGTTCAAGGGT
AGTAGGGTCACATTGGATTATATGGTTTGACGCCCAAGAGCACATTCACCTAAAACAAAA
ACTACGAGACTACTAGCAAACTCCAAAGCATGAGACCAGCCTATATTATATAGAATAAAC
TTTAGGATAAACGACTACACTTGGAGCATCTCTAAGGGGACACTTTAACCAGACTAATAA
TCCAAACAAAAAGACACAAGTCTCCCCAAACTGATCCCATTTGTTGAGACTGTTCGAAGC
CAAATCCATGTGAATGGATCGATATGATTGACTAGAGGGGGTGGGGGTTGAATAGGCAAC
TACCTATTTTTAGCTTTTCTTAACAAGTTAGGATTAACAACATAAAGGTTCTCTAAAATA
ACACTAGGTGAGCAACCTATATGATGCTACTTACTAAGAGTAAAGAAGCAAGTAAGAGAT
ACTCTCCAACAAAAGCAATTACAA