Contig Data
morexGenes
Links



Map Locations of contig_44333 (5224 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44333

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60385 1 3500 bp MLOC_60385.1 Available Available LOC_Os12g08180.1, FRAME:-2, EVALUE:0.0, 13112.m00862 protein receptor-like protein kinase 2 precursor, putative, expressed





CDS Structure of MLOC_60385






Contig Sequence (5224 bp)

>contig_44333 5224 assembly3_WGSMorex_rbca.fasta
AACTCCGTGTAGCATACATAATACGAGGTGATATCCGCCCCGCTATTTTTCAGGTTATGA
TTTGAAGTCTTGTTTGAGTAGTCCTACTTGTATTTGGTGGACGTACATATATATTGTGTT
AAAAGCAGATGTAACTTCATTATTTTCACCTTATTATTAGATGCCTCTTCGACCTTTATA
AGGACCCTGCAGTTTGTGATGTTGTAATTTTTCTTTCATCAAATGCACTACAAAAAAATC
ATTCTATGATGAGCGCCCCACGAAGGTAGATATGTACCCGGCATAGGGTTTGCCGGCTGT
AAACCTTGGTAAAGTGCACTTGGCATACACCTGGCATGGGTTTTGCTGAATATATTTATT
GGTTTTTGAAAGGAATATTAAGATTCGTATGTTCAATTGAAATTTATCTCCAAAAGCTCA
TTCTAGAATATTTGTATATACATTCCTCTTTATGAACATCTTTTATAAATTATACTAGGA
CATGGATTTTAAATTCCAGGTCCTTTGAGTATACCTTTGAGCATACTCACATTTATATTT
GATGACGACACATGCGTTGCACGTGCATGATTACTAGTTATCAATTCAAAGTACTAGTCG
AATTAACAAGAAAACAATGCACTCAAGTCTGCTAATAACCATCACTGTGGTGTTTAAAGA
TCACAGATCGTTCAGTCCAAAAAATATACACTTAACAATTCAAACTCGTCACCAACTCAT
AACCTACCATAGACTATGTCACTATACAATGATCACCTGTATACTGACATCCACAAACTA
AGAAAATGTCAGATTCCATCCAGAACTTATCTAACCTACCAAAACCGACTGCTTTCTTTT
GATTCACATTCACTTTGCGTTGGCGAGCAACCTTAAGACGTTGCGCATCTTCGGCCGAGC
ATCGGGAGAGAAAGTAACACAGGAGAGCGCAATATTGAGGACTGACAGCATCTGACTGTG
AACACCAACTGAAGTCCTTGAGACCCTGGTGTCAAGGACCTGCTCCCTTTGCTCAGGCCT
AGCTGAAAGACTGAGAGCCCACTTGGCTAGCTCCATGCCATCACTGACAGATGGTTTCCC
TGTCAAGAGCTCCAGTAAAATGACTCCAAAGCTATACACGTTGCCAGCCATCGTCAACCT
CATGGTGTATGCATACTCTGCAATCAAAATTCGGTGACATTTGATCTTAGTCTATATGAA
CTTCTCTGAGTTACTGAAATAACTGAACCAAAATCTGCAAGATTGTCGCGGGGGCTTGGG
CACAGGTTGAGAAGCTTGTTTGCCTCAGAGCAGTTATCCGTTTGAACTATTATTTGCCCA
GTTGAGACACTTTAGTTTGGATGGCAGCTTTCAACATAACGCTGATAAAGCATGGGCTTG
GGTGTCTAAATTAAACGAGTGAAAGAGGTAGCATTCCACTGAAACACTTCAGGAAATAAG
ATGGTACTTCAAGTTTAGGCCAAACAATGGGACAGGTGGAATTTGGAGGTACTATTCACG
CATATTTGTAGTCAAGCACATTAAGAAAAATTTCTACAAACAAGAAACAGACGACATGAA
GTGTTTGTAAATAAAACATAGCAGAAAATATCCATTTCTCAAAGAAAAATCAACAAGTTG
ACAATAGCTGCTCAAACTGAATCAGAATATGAGGATACGTGTTTTACCTGGTGGAATATA
GCCGACTGTGCCAGCAATGGTTGAAAGGCTCCCGCTACTTTTAGAAGGATCGATAATTTT
GTAAAGCTCAATATCTCCTATCTGAGGCTCGTTTGTTGACTTCAAGTGGATAGTCCTCGT
CGACAGATCAAGAAGCAGAACCGGCTGAGTGCGCCCATGAAGAAAGGTCAACCCTTGGGC
CACCCCCAAAGCAATGCTATACCGTGATGTCCAGTCCAGAACATGTGACCTTCCATCATG
TAGTAAGTCGAACACCGTGCTCTTGTACACATGCTCATAGAGGAGGTACGCATTGTCTTC
TGTCAAGACATAGGCCAATGGCACCATGACACTGGAATTGCTTAGCTTGCCAAGTACCTC
AAGCTCATGGCCAAATTTCTCTTGGCTACCAACGTGGAATATCTTGTCACTCCAATCAAG
CTTCTTCACAGAGTAGATTGATCCATTTGGCATCATGGCCTTGTAGTAGGTGCAGAACCT
TGTCTTCAGGAATATGTTGTTGGGATTGGAGACTGCTTTCACTGCATACCTAAAATCAAT
TCCAGATGTGTGCACACTGCTCATTGTTATGAAGTGGCCGTCAATGACTTGACACACACC
CACTTCAGTTGATGGTCCTTCGTCTTCCACACGATAAATTCTCTTGGACAATGCGAACAT
AACAATAGCAGCCAGCAAGCACAGTCCAACAAGAGAACTGACAATAGCAACAATAATGAC
AACAGTATGTGTCCTTGTCTTCCTACTAGTAGGAGAGTCATTACTGCTTTCCTTGCCATT
TGTAAGATCAGGATTTCCAGTGCTATCAACAGTCACACTTGAACGGAATGCAGGAAGGGA
CCCAGAGAGGTGATTATAAGATAGCACCAACTTTGTCAAGCTCTGTAGACCCTCAAGTGA
GGATGGCACTGGACCAGACAAGTTGTTGTATGAAAGGTCAAGGATCTCTAAATCTTTTAA
AACACCGACATTTGAAGGAATAGATCCACTGAGATGATTGTGACTAAGATTGAGAACTGC
GCTCAAACTGGTCGGCATTGTTGGGATGGTACCAGTGAGGGAATTATCTGCCAGATTGAG
CTCAATTAGAGACTGCAATGAACTGACTGACACTGGAATGGCACCGCTGATCTTGTTCCC
TTGAAAATTCAAGTTGGAAAGCTTTGGAAGGTTGAAAATTCCCATTGGTATCTCTCCCGT
GAATGAATTCAGACTAAGATTCAAAGTGTTCAGGTTTGTTAAATCAGAAAATGTACTTGG
GATAGATCCCCTGAGATTGTTCATTTGAAGCTTCAGAACTACCAGCTTGTCAAGGTTACT
GATTGCATCAGGCACTTGACCCTGAAAATGGTTCGATGCCAGATTCAACAAGGACAAGTT
CCTGCATCTTCCAAGCTGTGAAGAGATATTTCCCATCAAGTGATTGTTGTCCAACTCAAG
ATAAGCCAGGGCCAAGGCATCACCTATGGTGTCCGGGATGGTCCCATTGAGCTTGTTATC
ACCAAGCCTCAAGCGGTAGAGGTGTGAAGATAAGTTCCTAGGAATTGGTCCTTGGAGGTA
ATTGCTGGAGAGATCAACAGTCTCCAATCCCGCGGGGCCGAGGAGATCAGAGGGGATCTC
CCCACTCAGACCATTATAACTCAAATCCAACATCTTCACATGCTTTGTAATACCACTAGG
GACAGAACCAGTAAAATTGTTCTGATTAGCCGCAAACCGAGTGAGCGTCATGACATTCGA
CAAGCTCGCCGGTATTGCTCCAGTCAGGTTATTACCAGAAAGGATTAAGGTCCTGAGCTT
GGGCAGCTTCCGGAACTCATCAACGACATCACCAGTGAAACTGTTCTGACTAAGATCCAA
CAGGGTGAGGTCTGAATAACTGAACAGACTGCTTGGAATTGAATCACTGAAACTATTACG
AGACAACACCAACTCCTCCATAGAGCTAGCCATTCTTAGAGGGACAGCACCCACCAAATA
ATTGGAGCTGAGGTTCAGGCTCCTCAACCTAGGCATAACACTCAATTGGGTGGTCACAGT
ACCAAGGAAGGAATTGAAGGAGAGATCAAGAACCTCGAGTCGAGAGAAACCGGAGAGATG
GCCTAGTCGTCCCGACAGACGGTTGCTGCTGAAATTTAGCACCCGCAACCCGGCAGTCAT
GGGGCAAGGAGAGAAATGGCCCGTCAAATTGGCGAAATAGTTATTGGAGAGATCGAGGGA
GTGTAAGGTGTCGAGAGAGCATAAGGAGGCAAAGAGCGTGGAGTTGGATATGGAGTAGCC
AGATAAATCGACTTTGGTCACCACCAAGAAGGAACTGGAGTTAGAAGGGGAGCAACCGAT
TCCCCTCCATAGGCATGGATTGGAGACGGTTGTGTTCCACCCGGCTGAGCCCACAGAGCG
CGAGAGATCCCTCATGATGGATTCCTGCGTGTTGTTTAGAGGAAGGGGCGGGTTGCCGGC
GGCGGCGGCGATGGACAGATGGAGGCAGAACAAGGTGAAGAAGGAGAAGAGCGGTAGCGG
CACCGAGAAGCCATGGGTAGAGGAGCAGGAACAGTACCTCTTCCCGTCCCCCATGGCCGG
CGACCCTCGGCCTTTTCTCTTGATTCAATTGGCTCCCTGCTGATCCTGGCCGGCTGGAGC
AATAGGCCAAAGGGACTCCCCTAGGCTTCGGGTTTCTGGGAGGCCATGGCTGTGTGGTGC
TCGTGCCCTCGGGTTTTGGTCGACATTTGTGGATTCGAGTTCGAGACGAGGGTTGTAGTT
GTAGAGAGGGAAAGGGGAGACTGCAGTTGTCCAGTCTTTGCCTCTTGCGAGACGGAAGAG
GATCTTCTCTGTTTGGGTCCAGAGTTTTTTTTTTTTTTTTTGGTGGGAAAAAAAAATCTG
AGTTGACTGACTCACTCACTCACTGACGTATTTGGTGGGGTGACCAAAACCTGAGTTTTA
TTTTTCGAAAGAGAAAACACGAAACCTGAGGTGAGAACCCTTGTTGTGTGTGGTTTTCTC
GCTTGGATTTGCAGTTTTGCATGCTAAATTCTGAGGGCCAATCATGAACGCCATGTCTTG
CATGAAATTTACTTCATCTGTATCATAATAGCATTCTGTTCTAAAATAAGTGTTTTAACT
TTGTACTATCTCTAGTACAAAGTTGTATTAAACTTAAAACACTTATTTTAAAACGAAGGA
AGTACTTGTTATTGGAAAAAAAAACTAGTCTGGTTCTCATCAACAATAAATATATAGGAA
CAGCGGAAGAAATTTACTCCCTCTGTATCGTATTGTCGTTGGAAAGAATTAGTCTGATTC
TTTCCAACAACAAATATTTAGGAGCGGAGGAAGAAATTTACTTTCTCAATATCACAATAC
TTGTTGAAAAAACTAGTCTAATTTTTTTCAACTACAAATCTTACCTACTAATAAAGCAAA
TATTGCTTCTGCCGTACGTCATTCAAATTGCCCCTAAAGTTCACTAAAATTACCCATCAA
TGCCTCCTATAAGTCATAAAAACGTTTCAAACAGAAAAATCTCCGGACTGGGCCGGCCCA
TGTA