Contig Data
morexGenes
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Map Locations of contig_44328 (8787 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_44328

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60379 2 941 bp AK250336.1 Not available Available None
MLOC_60378 1 826 bp MLOC_60378.1 Available Available None





CDS Structure of MLOC_60379






CDS Structure of MLOC_60378






Contig Sequence (8787 bp)

>contig_44328 8787 assembly3_WGSMorex_rbca.fasta
CATCAGAGCGAGTCTTAACCTTGTAAGACCCACTTACAAGTGATGGGACGAACACCGGGA
GGAAGAGAAACAATATCCCACGTGCCCGTACGCTCAAGAGCAGCAAGCTCCTCCGCCATC
GCAAACTACCATTCAGGATGAACAACAGCATCGCGATAAGAGGTAGGCTCAAGTACAACC
GAAAGACCATATCGACTAGGAGAATAGCGGTCAAGGGGAGGGCGAGGCCGAGCCCAAAGA
CCATAAGTCAGCTAGGATGAGGAGGACGACACACCAAAAGTAGATGGTGCGTCAGTGGAT
TTATCCACAACACGTGGACGACAAGTATAATGAAAAGGAAAGGAGGGAAGAGGTGGAATC
ATTAGAGGTGGAGACGGGGAGTGTATCGATGATGAAGATGGAGAAGGGGAAGATATTGGT
GATGAAGGTGGAGAAGGAGAAGGTATCGATGATGAAGGTGGAGAATCATGCGATGAGGGA
GGAGAAGGTATCGATGATGAAGGTGGAGAATCATGCGATGAGGGAGGAGAAGAATCCCTA
GGAGAGGACGGCGTCGGATCTGCAATAGCAGGACGAGAATGGGAATACTGGGCACAGAGG
GAGGTGTATCTGAAAACGTAAGAAAGGAGATGTCCTCCACTGAAAAAGCCAAGGAGGATG
GATGTCGGTAGAAGGGACGAGACTCGTCAAAAGTCACATCTCGGGAAATACACATCCCAC
GACCGACAGGATCCCAACACTGATAGCCCTTATGCTCATCATTGTATCCAAGAAAGATAC
ACTCAACAGACTGAGAGGTCAGTTTGGTGCGCTCACAAGGGACAAGCAAAACATAGCAAA
CGCAACCAAACAAACGAAGCGCCGAATAATCAGGAGGATGACCGAAAAGACGCTCGAGAG
GAATACCACCCTGTAGAGCAGTAGAAGGCTGAATGTTGATGAGGTAACAGCCTCAGCTGA
AAAGTAGGGCGGAAGAGAGGTGGCGATCATCATCGCACGCGCCGTCTTAAGAAGGTGACG
ATGCTTGCGCTCAGCCACACCATTCTGAGAATGAGCACCAGGACAAGAGAACTGAATAAG
AGTATCCTACTTAGCAAGAAATCCTCACGGTGCATGAGAGATATAGTCACCGGCTGAATC
TACGCGAAAAACACAAATAGAAGTGGAAAACTGGGTATGAACCATGGCCGCAAATTTTTT
GTATATAGATAAGACCTCACTACGAGAAGACGTGAAATAGATCCGAGTGTACCGAGAAAA
ATCGTCTATAAAATAATATAGTGCGATGACCCCCTTTCAAAGCGAAGGGAGCCGGACCCC
AAACATCAGAGTGAACGAGATCAAAAGAACACTCGGACACTGACTCACTGTGAGGGTAGG
GCAGCTGAATCTGCTTACCAAGTCTACAACCCATACAACCAACGAAGCATTACCGGAGAT
AAACCCCAGAACTCCGCGATGAACCAAAGACGAGAGACGAGGACCACATAAATGGCCAAC
ACGATGATGCCATTGAAAAGAGCTAGTAGATGCAGCTACAGGAGCCGTGAGACTAGCGGC
GGTGGCAGCGGAGGGAAGACGAAGCCAGTCAAGCCCCCAAAGACCATCAGAGCGTCGAGG
GCCAGCACCAAGCAGAGCGCCCGTGTGACGATCCTGAACAAAACACGAATCAAAGTCGAG
AATGACCCTACAACTAGAGTCAACGATCTGACCATTGGATATGAGCTGCATGGTAAGTCG
AGGAACATGAGCGACAGAGGGAACATGAAATGAAGAAGTGAAAGAGTGCCTCGACTAGCT
ACAGGGAGGGGAGTGCCATCAGCTGTAAGAACACGAACTGGAGACTCGGCGGGTCAAATG
GAGGTTAAAGTGGAAGAATCATAAGTCATATGAAAAGACGCTCCATTATCAAGAATCCAT
GGGGATGTACCTGAATGAGTAGATGGTGGTTTCTCAATGCCAGAAGAGTCAGCCACGGAA
ACTGCAGAACCTGACGGTGAAGAATCCCAAGCATCAAGCAGGCACCGCAGCTGCTCAATC
TCATGCGCAGACAGGGACACGGCCAAAGAGGTTGAGGTAGAAACACCTGCCCACGATGAG
CAGTCGTCACCACTCGTGAAAGCAGCGTGTGGAGTCGACCGAGATTAGTGAGTCGCCTAG
AACCGCATGTGGAAGCCACTTGGGGAGCCGACGTAGAGCGGTCGCCGTCGCGCGCGGAAG
CCGCGAGGGGAGTTGGTGTAGGGCGACAATCACTGGGTGCGGAAGTCGTAGGAAGAATTG
CTGAAGAACGACCAACACGGGCCAGCAGAGGCGGTGCAGCTGCTGAAGGAGTTGACGTAG
AGTGGCCAGCAACACCGCGAAAGTCGCAAAAGGTGTCAAAGTAGAGCGACAGCCATCACC
TCCAAGCGGGCGAGCACCAAGCACCAAGGAAAGGCGCATGTGCGAGACGGGATCAATGTA
GGGAACACCGTGGAAAAACATCGAGCAGCGAGGAAGAGGCGTACCCGACGAGAGCATTGT
ACTTCTTTTTTTTCTTTTTTCTTTTTTAGAGATATCCGATCTGGATCTGGATGACTAACT
GGACTGGAACCAGTAGCAGTTCCACGCCACACAGGCACACACGTGCCCACCCGCGAAAGT
AAGAGCAGCAGAGTGGGACTGCAGGGCCGGATGGGTGCCGGCAGCGGACAAGGCCGGTGG
ACGGCGGCGGACAGGGCCACATCGGGTGGCCAGCGGCGGCAGCGGACGGGGACGTGGCCT
AGGAGCTCCGGGCGGCCAGCGGCAGCAGCGGCTCGACCAGGAAGAGCAGAAGGCGGGCGC
GCAACGGCTCGACCAAAGAGCTGCAGCCAGAGACGCACCGTTCGGATTGAGGCCGAAATA
GTTCAGGGGCGGCAGTCCCGATCAAGGATGCATCGGGCTTTAGGAACTAGCGGCCAGCGA
CAGCAGGAAACAACAAAGAACGGCGGCTGGGGGCAGAATCAGCAGCTGGTCAGCGGAGAT
CGTGACCTCCGATAGGGGCTGCTCTTTGTCCAGATCGGGATCAATCTTGCACGGACGAGA
AAGATGACTAGGCAGAGTAAAGCAACGGCAACATAGAAAAATTGCACGCGCGAGAGGCAA
GAGACAATTTGGAGCAGCGCAGCCGAAACAGGATGATCGCGGCGGCCGCATTGGATCGAG
CACGAGTTGCAGCGTGCGAAAAGAAGACCTAAAGTTCTAATACCATGTTGGAGAAATATG
CAACTTATATTATTAGGAGGCCAAAGCCAACATATATACACATACATGAGGATGCCAAAA
GGCTACAGGAGGATGTCAAAGAGACTAGAATGCAAAAGATCAAAAGACATCACTAATATA
ACTCTAACATACATTTCCAAATAATCGGTATTTTCTAGTTAGGGTTCCTCTGATTATGTT
TTCTTAAGAGATGAGGAGAAGGTGATGCATGTATGCCACAATCAACAAATATTACCTGGA
TTCCTTCTAATGCAGCCCAACTCTTCAACACCTCTGGCTCAACAGCTACAACGGCAACTA
GGCAAGAATTAAAGCTATCACCTGCATCCAAACCAACATATTCAAAATATGCATGACCAA
CATTAATAGTTACAGCAAACAGAAAATCGTGATATTACCATATACAAAGCACTGGGCAAT
GAACTTGCACTTAGCATAAACATTCTCGATCTTCTCCGGAGCTATGTATTCTCCTTGAGC
TAACTTGAAAATATTCTTTTTCCTTGAGGCACGGACATATAAAAAATAGTAATTTAGGAA
GAGAAGCCAGACTAAACAGAGTCCAGGGGAAAGGCATGCGGAGAGTATAGAGACAACAGA
TAGATAAGATGCAATAGATACAACACCCAAAGTAAAATAAAAGCCTAATGGAAATATGGG
GTGTCTTTCAGTTTTACCTGTCTATAATCTTTAGGAGCCCTCCAGGCAGCCACAAACCTA
TGTCCCCAGTATGCAACCAACCATCCTCATCAATGACCTCTCTGCTGCATGTTACAAAAC
ACATCCGTATATCACTTGACAAATTATATGAACCATTTATCAAATTTTACTTAACAAAAG
GTAAACAAGTAGGATATCAAGTTACGTTTGAACTTCATCTTTATAGTAACCCTGGAATAT
TATAGGTCCCCGGGCACATATTTCTCCACGAGGGTATGGTTGATCCTCAGATGTGTAATT
CATTTCAGGGACGTCCACAAGTTTAACCTCTGAAAATGAAAACAGGGTTTGCATTATGAA
AGCATGTGAGCGAGCTGTGCAAATATTACGAAACACATGGAACACGGCTTCATTTGTTAC
ATGAGTAAGGATATTTGATATCTTTCACAACAATTAGACTAATTTTATTCAATCCAATCA
GCATACAGAATTAAACAAATAGAAGAACTTAAAACTAACTCCAAAACAAATGCCAAACAT
AAAATATTAATAAATGATTATATGGGATAAGTTTCTTTGATGCAGCTATTTTTGTAATAA
TCATCAGCTTTCAAAATCTGACCATCATTGCAAAATAATTAAATCCATGCAAGTGTATCA
TAACTTTAGGATGGCTTCTCTGTATACTGTTATTGCATTAAGTTGGCCTCATGGACAATT
AGCATCTGTATAAGCACAACTTTAGCCAAGCATATCTGATTCCACGCCTGAAAAATGGAG
CTTACCACAAGCAGGATTGGGAGATCCAACATGACCAATTGATATATCACCAACATCCAT
TAAAGTAATGACGCAAGATGTTTCTGTCATTCCGTAGCCTTCAAGAATATCACCACCAAA
GCATCTATAAAAGAAAGTGTTATGATTAACAAAGCCAGGTTCTTCATCATGCCACACTAA
GGGAGGGCAAATGAAGTTAGCTTACATTCTGAGGAATTCCATTACATCTGGCGACAATGG
AGAAGCACCTGAAGACATAACTCTTACTCGTCCACCCAGCCTAGCTTTTATTTTGTTAAA
TACCAACTTATCCCACACTGGGGATGGATTCCGTCCTAAAGACATAAGAGTAAAAAATAT
ACATTCATTATATACGTATTGGTGGTAAATAAGATTGAATTAAATGTTCAGTAAATGCGA
AAATGCATCTTTCAGTACAATGAAAACTTCTTGGGAATTCAGATACTAGCTCAAGTTTCA
GTGTATGAGTTACATGCTTCAGTGTAACTAACCCAAGAGGATTACTAGCTCCAGCTTCAG
TGTACTAACAATAAATGCTCTATGTTATGACCGGTACTACGTACGTACCAACGGAGGAGG
CCCAGTGGGCAGGATTAGTACGGGCTTAGCCCAAGTTATCTTAGTTATCTTTTAGTCCAA
GTTATCTTAGTTATCTTAGAGTCCAAGTTATCGAGATTATATAAACCGATGTAAACAGCT
CTTTTGGAATTAAGCAATAAGACAATTCTATTGCCGAACCCGAACCCTAGCCGCCGCCTC
CTCTACTCGCGGCCGCCTCCTCCCTGCGTCGAGACAGCGCCGTCGCGCCGGCTGCGGCGC
CCTCGTCTCCTCCAAACCCCCTCCTATCCTTATAACCTAAGGCAGAGGTCTGGTAGAGCC
CTAGCTCCTACCACTCTATGATAGGAAACTCTAAAGTGATTAATAAAGGCTTCCAGCTTC
CGTTTCCTGCGCTTATAACCTTATTTCATTTCACAAAAAGTGACCTATATGAAGATCATT
TGTGTATCAGAGTCCAAATGGCTTACTGCACCATTTATGTTTCTACTTGCCAACTATATT
TGATGATCACGTAATCAGTATATATATACAACAACAACAAGAACAACAAAGCCCTTCAGT
CCCAAACAAGTTGGGGTAGGCTAGAGTTGAAACCCGTAAGATCTCAAAACCAAGTCATGG
TTCTAGCACGTGGATAGCTAACTTCCATGCACCCCTGTTCGTGGCTAGTTCTTTGGTGAT
ATTTCAGTCCTTCAAATCTCTCTTAACGGGCTCCTCCCATGTCAAGTTTGGTCTACCCTG
ACCTCTCTTGACTCCTTCCACGCACCCCTGTCCATGGCTATGCACATGTGCTTCTAGAGG
CCTGCGTTGTATATGCCCAAACCATCTCAGATGATGTCGGACAAGCTTCTCTTCAAACGG
TGCTACCCTAACTCTATCACGTATATCATCATTCCGGACCCGATCCTTTCATTCCGGACC
CCATCCTTGCTTTTGTGGCCACATATCCATCTCGACATGCGCATATCTGCTACGCCTAAC
TGTTGGACATATCGCCTTCTAGTTGGCCAACATTATGCGCCACACAAGATTATAGGTTAA
ATCGACGTCCTATAGAACCTGCCTTTTAGCTTTTGTGGCACTCTTGTCACAGAGGATGCT
AGAAGCTTGACACCACTTCATCCATCCAACTTTAATTCGATGGATCACATCTTCATCGAT
ATCACCATCCTTCTACAGCATTGACCCCAAATATCGAAAGGTGTCCTTCTGAGGTATCAC
CTGCCCATCAAGGCTAACCCCTCCTCCTTATGCCTGGAGGCTAACCTCCTCCTCGTGCCT
AGTAGTACTGAAACCGCACCTCATGTACTCATTTTTGGTTCCACTAAGCCTAAAACCTTT
CGATTCCAAAGTATATCTCCATAGCTCTAACTTTATATAAGCCATGTCCGACAACTAGCA
CCACATCATCCGCAAAGATCATACCCCAATGGGATATCTCCTTGTATATATCCCTTGTGA
CCTCGTCCATCACCAAAGCAAAAAAAGACAAGGGCTCAAAGTTGACCCTTGGTGCAAACC
TATTATAATTGGGAAATCATCAGTGTTACCATTGCTGCAGTGTATATGTGGATTGCCTAG
CTCTTTCCATCAGTTAAAACTTTTGGTTGCGTTGGCTAGTGCATGAAGATTAACATGGTA
TCAAAGCCTAAGGTCTTGAGTTCAAGTCCTGGCTTTTGCAATTTATGTTACATTGGCTAG
TGCATGAAGCTAAACATGGTATCAGGACCTAAGGTCTTGAGTTCCAGTCTTGGCTTTCGC
AAATTATGATAAATTGTTGTTCCCCCCTCTGTGTCCACATATAGGCCTCTTGAGCCATAC
CTCTAAGTCTATTTACATGTTGACTTCCCGCATCACACGTGAGAGGGGGTGCTAAAGTGT
ATATATGGATTGCCTAGCCCTTTCCATTAGCTCAGGCTGATGGATGAACTAGTGAGGTGC
ATATGACTTACAAACAAGAGGTTCAGGGTTCAAAACCAAGTAAACGCAATAAATAATTGC
AGCCTACCCCCACTTCTGTTGACCACGTCATAACTCCAAAGGAGCATAGACGTGAGGGGG
AGTGTTGGAGTGTAATGTCCGGCCCTCTCCCATAGTTCGAACTTTTGGTTGCGTTGGCTG
GTGCATAAAGCTTAACAGTTATCACCTGTCCGAACACTTGTCACAACATCATCGTAAATG
TCCTTGATGAGGGTAATGCACTTTGTTGGGACTTTGTGTTTCTTCAACGCCCACCACACG
ACATCCGATGGTATCTTATCGTCGACCTTCTTCAATTCAATGAACATCATATGCAGGGAT
ACTCCCTATATCTCTCCATAAGTTGTCGTGCCAAGAAAATGGCCTCCATAGTCGACCTCC
TAGGCACGAAACAAACTTATTTTTGGCCACGTTTGTTATTCTTCTTAAGCAATGCTCAAT
GACTCTCTCTCTCTCTCTCATAATATCATTGTATGGTTTATCAACTTAATTCCACGGTAA
TTAGTACAACTTTGAACATCCCCCTTGTTCTTGAAGATTGATACTAATATACTCCGCCTC
CATTCTTCGGGCATCTTGTTTGACCAAAAAATGATGTAGAAAAGCTTAGTTAGCCATACT
ATTCCTATGTCTCCAAGGCCTCTCCATAATTCAATCATTATAAATATGCCCTCTGGAAAT
TAATTTGGATAAAGAGAAAAGGGAAATCCTAAGTTGCTGACTAAAGTGTAACTTGACCCT
AATGATCGATTAGGTCCAAACTAATAATGGATGACTGAAGTGGGCATATTTAAGCTTTTT
ACTTATATACCCCCTCCGTCCGGAATTACTGTGACAAGTAATTCGGGACGGATGGAGTAT
GTGTCGGAACAAAAGAATCTTAAACCAACTCTTTACCATTAATAATAGCTTGCCTCTTAG
CATTATATGCAGCATGAAATAATCGTTCTTTCAACCCACCAGACTCCTTCACAGCATTTG
TAATTCTGCATAAATAAGCCAAAAAGATATGGGTGGGTACTGTCACATATGATACCAAAG
AGGAAAAATATAAAAAATACTGGTTTAGTGATATTTACGCAGCATAAATTTTGTTATATA
ACCGGGGAACACTCGCAAATATTGTTGGTTTCAGAGTATTAAGATCATCCATCAGCTTCA
AATTATCCTGGAATTAACGAAAAATACTCATCAAAAAGATGAAAAGAAGCCAACATACAA
TGTATACACACTACAATATTATCTTGGAAGACGAACAATCCTTCAAAGGATACATTAATG
GTCTTTAGTTAATCAATAAATGACCAACCAGTTTGGTAAAACTATTTAAACTAGAAACAA
CTCAAATGTGAAATAACGAATCTGATAATCCACTTTCAAGTTAAGTCCGGCAATAACTTA
TAGAAAAACTGATATGACCACTTAATATTGAATGCTTATCAAAATTGTTCTACGCACAGT
TATTTGAATGATAACTCCGCCTATGTTGTCTCAACATAGCCGGTCCCAAGTCCGGGAAAA
GGAGGAGGGTTGTGATAGGCGTGGCGA