Contig Data
morexGenes
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Map Locations of contig_44323 (6873 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_44323

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60374 2 1246 bp MLOC_60374.1 Available Available LOC_Os06g49490.1, FRAME:-2, EVALUE:2e-55, 13106.m05298 protein ZOS6-10 - C2H2 zinc finger protein, expressed
MLOC_60375 1 980 bp AK358921 Available Available None





CDS Structure of MLOC_60374






CDS Structure of MLOC_60375






Contig Sequence (6873 bp)

>contig_44323 6873 assembly3_WGSMorex_rbca.fasta
GGGCTTCCAGCCAGCTTCCGGCTTCCGGCTTCGAAGCCAAAAGCTCCTATTTAGGGGCTT
CCGGCTGCAGCTGTGAGCCTGAAGCTTCTAAATATAAGCTTTTGGCTTAGAAGCCGGTAG
ACGGAAGCTGGCTGGAAGCCTAACCAAACACCCTCTAAGAGGGGAAGGGGGCAGCCGATG
ACTGAATCGTAAAACAGTTTCAGACACAATGCACAAGCGGTCCTATCTCTTACACGATTC
CTACAATATTTATGCACTCCAAACATAAGCAGCACATGTTAGACCGAAGGGAATTAAGTG
AATGCTAAGCTGCCTTCACCACGTTTTAATCAAATTAGTGGCGAAAGTCTCAATCCGTGA
ATCGACCTCCAGATCACCAATTTACTACTTACTTCAATTGCAAACATCATTTCAGCATCA
ATTCAATGCCAAAGGAATGATAAAAACTAATCAACATTGCTTCAAGCATCATGGATTCCA
TGCTATCAGAGGCACTATGGACGCTTTGATTGTCATAATGTAAGATATTGTACTGCCTCT
CCAGTGGGAGATACAATAACGAAAGTGCATTTGCAAACACCCAGCTATTCATCATTGTTA
TAAAGTGCGGTGCTCAGTTAACCAACATCAGTTACCACACTCTAGGTAGCAAGCAAATTG
ACAGCAACCAGTTATTTAGGCTCGGTTTAACTCATCCCAGATGTTCTGGAGCGCATAATA
TATCCGATTACAAGACAACCAAATATCTTAAAACGACCGATGAAACTGACATAGTAGTCA
TAACCAACTGCGAAGAGGCGCTTGAAGCTTTGGAGGCCTCATTTCTGTTCATCGCTGCAA
TGACACATTCATTCATCATCAAACTGAGGGCAGCCAGGCTGCCAGTGGTACCACCAGGAG
TATGAACCATACTCCCAAGAGACCAATTCTGACCGATCGATCGATGATGCATAATGAGCA
TGGCATAAGGAGCAGCATGGAACAAAGAATAAGGAGGGGCGAGCATTCTAAATAAAGGAT
TTGTGTATGAAATCTATGTCGTCCCCTTGCTAAAAAAGGGACAAACTTCATCAATAGCAA
AGAATCGACGAGGAAAAACACTTCTTATGGCGCACCGAGGACACTAGGAAAACACAAGCG
CAAATCCCCGACTCATGCACTTTAGCGGCCAATTGGAGGAACTGGATCGACAGCAGATCT
TTCAGATCGCTTGCGCGCCACTAGACATTAATATCAGCAAACAATTTACCAGCATCTTTA
AGAGTAGCAACAGGTAATTAAACATGGCAACGAGGACACGGCCTCAGGGTATACAGGGGG
AAGAAAAATTCACGCGTCCATCACACGACACACCACACGCATCAGCAGCAGCAGCAGCAA
CAGCATCAGTATTTTAGAGCAGCAGCAGCAGCAGCATCAGCGGCAGTATATATAGTAAAC
TTAAGACAGCAGATGCAGGCGACGACCAAGGCAGATCGGACTGTAGAGGGTGTGAGAGGA
GGGGGTTTAGATTACCCCGTCTTCTTGAGGCTGCCGCGGACGCCGGGCTTGGGCTTGGAG
GAGGACGCGACGGCGGCCGCTGCGGCGGGCGCGGCGGCGGCGGTGGAGCCGTGCAGGTTG
TTGATCTTGTCCGGGTCGAAGGGGAGCTTGGGGTGGCGCGCCTCGTGGTGGATCTGCATC
GACTTGACGTCGGGGGCCGTCACCTTGCAGAGCGGGCACTCCATCTTGGCGTGGCCGCCC
TTCTCCTGCCCGAGCCGGTCCTTCTGCCCCGCCTTGCCCCCGCCGCGGTTGGTCGTCGCC
GCGTCGATCTTCGCCGCGATCTCCTTGGCCGTGTGCTTCTTCGGCTTCGCCTTGCCCGTC
ATCTCCGACGACGACCCGCTCTCGGTCTCGCTTTCCGCCGCCGCCGCCGCCTCCTCCTAA
CCCTACTTGCTGCGCTTGTCTTCTTCGCGTTTGACGGGACGGGGTTTGGGGAGGGCGGCT
TGGTGCGGATGGGGGGCGCCAATTATTAGTCCCCTGCGGCGTGCGGCCCTGCCCGGTCCG
CCGTCCGATTTCGGACCAACGGCCCGGATGCTGACCGTAGGATTCCTCGCTTTTTTTTTC
CTTCTGAAGAAAATACTATTGGTTGGATATACAGTATATATAGAAGATCGGCTTCTAGGG
TTGCTCGCCTGGTCTTTGCATGACTCATTGTTTTTCCTTTTTTTTCAAACCACGGACTCT
ATTTTTTTTATTTATTCATTTATACTTCCTCCGTTTCTAAATGTAAGTTTTTTCAGGGAT
TACACTACGAATTATGAGAAAAAGAAAAGGATTGTAGGACGTAGTACTAAGAGGATATTT
CTATTTATATATGGGGGGGAAGAGAATACTACTGTAGTGGTGGAGGTTTGTTGGAGATTC
TCCTCTAGCGGGCAGTGGTGGTGGAGCTTCATCGGCACAAAGGTGAACGCAAGCATTTCC
ATATAAACCCATAGGGGTGGTGCTTTCAACTGTTTTCAGAACTTTAAAATGTGGACTGTT
TCTTCTTTACAAAAGCCAGAAATGTTTCTTTCGAGATTTTCTTTGTATAGAACTAGTGTG
ACTTTAATATTGGTCCTCAACAAAAAAACTACTGTGAGATTCATGCGTTCCTAACAATCA
CCAGACAGGAGATGTTGGCCGCTAAACTTCAGTACTAAGCGAGAATAGATGTTGGCCGCT
AAACTTCAGTACTAAGCGAGAATAGATGTTGGCCGCTAAACTTCAGTACTAAGCGAGAAT
ATTCGTTTGCTGATGATCATTTATCGTTCAGATTAGAAGGCACGTAACAGCACTTCTAAG
GTAAATAACCCCAGCAAACATGCAAGAAAAGAGATGATAACAGCACTTCAGAGTTGCCAA
CCAGATCAGCAAGTCGTTATACTTTTTTATAGCAAAATGAGAAACATTATCGTCTAAATT
CACACGAAAGTATAGGAAAACAGACCGGCTAATAACGGCTCTACGACGAAAACTAGTCAC
CGTAGCTTCCACCAAAGACCATTCCAGGTCATCACAGCGGCACTTCTCCGCTGTCAGCAA
TGACAACTTTGCTCTTTGGTGTCCCGTTCTGCTTGCCTTCAGCCTCAACCTTGTATACCA
CGTCCATCCCAGACAACACCTTGCCGAACACGACGTGCTTGCCATCCAACCTAGCATACC
AAGCGTAGATAATCAACAACAAATCCCCAACAGAACAGAAAGTCTAGCACAAACTGCTGC
AATCACAAAGAATCGTGAAGAATTACCAGCTCGTAGTCACAGTGGTGATGAAAAACTGGG
ATCCATTGGTATCTCTCCCAGCATTGGCCATGGAAAGGTAGCCTGCACCGACAACCAGTC
AATGAAAAGGGCGGACGGATTAACACGTGCTATCATTCTAATGGAGCACTTTCCAGTTGC
AAAATGGATTTCGAGAAGCACGGATCATTACCTGGTCCAGTGTGCTTGAGCTTGAAGTTC
TCATCGGCGAACTTTGTGCCGTAGATTGATTCACCACCCCTTCCATCGCCAAGGGTGAAG
TCACCTCCTTGGATCATGAAGCTGGGGATAATTCTGTGGAATGAACTCCCCTTGTAGTGG
AGAGGTTTGCCACTGTTGCCCATACCTTTCTCTCCTGTATGACAATGAAGTGGGACAAGG
TCGGCAACCACTAGCAGATACCATAGAGAAGCTACTATACAAACTGTAGTACTAATAAAG
CAGATATTCTGAATATAATAATATATGCGGTACATAATGATAGGCTTTCATGATACCCTA
TGGTGGAATATGAAGAATGTGACGACAGTTATCCACCATTCTTTTCATGAAGTAATATAG
ACATATTATACCAGGTGTGCCAACTATAAATTCAACAAGTTTCTTAATTTCTACTCTTCT
TTTTTCCTATTGACACCTATATTTGGGCACTTGAATGACCAAAGGGATGAACAATCAAAA
TCCTGCACACAGGGCTACTCCTAGATACTGCACAGAACTCAAGACTTAGAAACCTTCAGT
GATGCTTGAGAGAGCTTGGGATTTAAACAGATTATCCCCAAAAATTTGCAGGCAAACAGG
CTGCCACCATACTCTCAACGTCATTGTGTCTAGAATGGTAAACTTAGATTTGAAATAATG
TGGGAACAATCCCTGTTTTTGAGTCGAACGACTAGTAAATGAGTAGCAAAAGAAAAAGAA
AAAAGTCGACTCAACAACGTGTCGACGAGTCGCAACTGCAGGGTCGACTATTTAAGAGTC
GCTACCCCGGAACGACTCATTGACTCGAAAACCTTGGGAACAATAGAGATAGCTGCTTTC
TTTTGAAAGGAAAAGGTAAGCAGCTTTGCCATGTTACAAGCATAGCATGCACCGAATCAG
TTATATAATTTCCACTGTGCAATTACGTTTTGACTTCCTGAGGAAGCCAATTATATTTGA
TTGGATAAATTACTTGAAGATGTGAGCCAAAATAACAATTGAGATTGGATAGAGCGAAAT
TAATTCCAACAGCCAGCCTTGCCATCAGACTAATTATCTAGAAAATTCAAGAAACAGGCA
GCTTAACGCTTTTAACGTATAGGAAACAGAACAAGCGGTAGAGAAGCATACCTGTGCAGA
GTGCTCTGAAGTTCTCTGTTGGAAAAAAGATATCAAGCCATTAGCATTTGTGCCATCCAA
TAAAAGAGTGCATGGCTACTAGCCCGAAGAGTAAGGAGATGATACCTGCAGTTTTAGGAA
CAGCCTTGCCAAAAAGTCCCATGACAACCCGACCTATGAAATTTCAGAATTAATTTAAAT
GCTAATGAATCGACCAATCAAACAATGGGAGGAGGTACACTATAAGAAGACACTCCATGA
ATAGCGCCCCAGTGAATGTTTTTCTCACTAAACATAAAACAAGATTAGGTGCAGTGCGGC
CATCTAAACATGAAGATTCAGCCTCAAAGTCGAACTCACATTTTTCAACGATCCTAATCA
AAAGGAACCACTGGACTTGTAACTACAAACCAGATACCTGGGCTAGGAAATTAGGCACGC
AATATTGGCTGTATCAGCAGTAGTAGTCTACTGTCTGCCCCGTACTAGAGATGACACACG
TCGCCGATCTGAAAACAAGGCTATGGGCGGGGGTTCAGCAGCACAGACCTGCGGGCTTGC
CGTCGATCTCGATGTCGAAGTAGACCTTGTGCGTCACCTCCGACAGGTTGGACTTCTTCC
CCTGGAAACCAGAAAGACAATTGTAAGCACGACACCAGATCAAACCCTAACAAACCAGCG
ACCCCAAACACATCCAATCCGTGCCGATCCACGGCAGACAGATATCTGCGAGAGAGTGGC
GAGCAATCCGTGGCGGAGGAACGATCAGATCGGCGCACGGAGGAACGAGAGGGGGTGGGG
GTGAAAAGTAAGAGGAGGGGCTTGCGGAAGACGGACGAGGTGGATGAGCACCTGGGCGAG
CACCAGGGTGGCGGCGACGAGCGCCAGCCACAGGCACAGGTGCGCCGGGGCCCTCGCCGC
CGCGCTCCGCCTCCACGCCCTCATCGCCATCTCGGATCGTACCGCCGCGCACGAGAGAGA
GGGAGAGAGCAGATCTGTTTACTCGTTCCACTACGCAGTCTCCGAGAGAGGGAGAGTCCA
CGGGCGAGATAAACAGAGCCGGCCGTTTGGTTGACAGGTGGGGCCGAGCTGTCAGACTAC
GGCCTCACAAGCTGCTCGCTCCCCGACCGCACCCATGAGTGCTCTTTTGCTTTGGAACAG
CAACTCCAACACCAAATTCCACACCCCCTCAAAAAACACCAAATTCCACTCACTTCATTT
TTTATCAACTAGTACAAATGCCCGTGCGTTGCACCGGACAAGAAAAAAAAATATAATCTG
CTTGTTGTGCCATTATGCGGCATTAAATTAGTGTTTTAATCAAACAACATTTGTTGATTT
AAAACTATTTGACATTGTTAATTGTTTGTTAGTCTATTCAGTTAGCGAAAGTTCTGTTCA
GCAAATTCATGTTATTACTTTGACATTGCCCATTGGTGGACAGAGTTAATATTTTTGGCA
AAAGATCTCTTTGTTATAAATGATTCAAATTTATCTATATGTATTATGTATGTCCCCAAC
AATAGAAAAAACACTCTCGACCTCTTCATCTCTAGCAAATCTTATTCAGTGACAGTGATA
TGCCAACGGCCTTTCTTTGATTTCTGAGTTTCAGAGGTAGAGGGTGGAGCAATTAGAAAG
TCAAGAAAGGGCTAGATAAATCTGATTGAAGAACAAAAAACAACAGAATATCTTGTTGTG
CATAAACAATCAATTATATGTCCAGTTAGTACTGTCCAGTTAAAGTTCGAAGCTATAATC
ATAGATCTTACAATTGTACTTCTCAAAAGAACCATTCAACGTCAGACTTTTATCACTGCT
AAACGTCGGGATCTCATATTATACAGTGATAATCCTCCTAGATTAAGATCATACCAAATT
AGTGAACGAATAGAATAACTACGATTTGGACATTACCTTGGCGACCAGTGCCTGGGCGCC
GACGAACTTGTCGTCCCAGGCCAGCGACTGCCGCACCCCGCCGACGTTGCTGGCGTCGGA
GATGTAGGCCTTGTACTCCTGGTCGCCGGTGGCGATGTAGAGCCACACAGCTGCCCACAG
CAGCTCGTCCTGTTCCATTTCCAGCTAGCATCTTTCAGTATTTTTATGTACAGAAAACAT
TACTTACTATTTTCTGCTTATCATGATATTAGTTAGTAGAGTAAGATGCTACCTCGTCGC
CGCTGCTGCTGTAGAAATTTTTGCTTGATGGAATGCTGTTCTGGTAGAGCCCACGATGGT
TCTTGGTGAACTGGAACAACTGCACAAAAGTGA