| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_44300
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_60345 |
1 |
548 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_60345
Contig Sequence (7228 bp)
>contig_44300 7228 assembly3_WGSMorex_rbca.fasta
TCTAGTCTTTGCCCCTGTTTTTCAACCCTTAAAAGTGTCAAAAATGGGCAATTCTCAACC
CTTAAAACTGGTTTTACATTTAAGGGTTTGAGGGTTCTGCTAGAGATGCTCTAACAAGAG
AGTGGACACACCAAACTGGTCTTTGCGCCGGCGCTGACACGTGATCTGCCCTTCGCCGTA
CTTGGATGAGCTCCTAGGGATTTGGGAGAGGAATGGGAATCGAAGGAACACGACGAGCAG
CGCCGCTAGGTAAAAAGAGGTTGGCCCAAATTTGAAACAGTTCGCACCCCCTACCCTTTT
GATCCACTATTCACTACCAATCAAATGGTTGGCGGTCACTCACGGGTGGGTATGTCTATC
TCGTGCGGTCGTTGCCCGTGTTTAGTCATGCAATCTTTTTGCACGGACTGTGGTCAGCCA
CCACAGAGGAAGCCATTGTGCAGTTCTTCTAGTTAGATTTATAAAGGCCGACGACCAACA
CTAAACAAAAGCAAATGATGCTCGAAGCAAACGCATATCATGTGAATAATTATAATATAG
CTCTAAATAAGATATACCTATAGTTTTCAATACGGGAGAGAGGATGTCATATGGGACATC
CCCAAGCTTAGACGCTTGAATCTTCCTTAGATATTACCTTGGTGTGCCTTGAGCATCCCC
ATCCTTAAGCTCTTGCCTCTCGTTATTTTTCTCATATCTCCATCTCACTCAATACTTGAA
AACTTCATTCACACAAAACTTAACAAAACTCATGAGATAGGTTAGTACAATAAAAATAAA
TCTTTCACTCATGTACTATCAAGAAAAGATTCATAATCATTCCCAATTGATGTCTAGTGT
ATCCTATTATTTCAACAATTCATACCCCCTAATATATGCCATGGAAACTTTAAAACAGGC
AAACAGAGGAAACAAAACATAATATGTCAAAAGTAGAACAATACATATTAATCTAACTAA
TTACCATACTTCTGTAAGTCCAAAAATTCTGAATTATTAGGACACGACAAACAATGTATA
GCAAAGTAGTTTGTAAAAATTTCAGGAATTGCTCATGTTTCTTTAAAGTGAAATAATTTA
AACACTAGATGCAAAGTTTATGTTTCTGCACATAACCTAATAAACAAGCATTTGCAACAT
TCCAAAGGTCTAACTTGGGAGAAAAATAAATGAAAACAAATGAACACAATTACTACAGTA
GCAATCATCATGTACACACCCTGAAAACAAAACTAAATAAAGGATAAATATTGGGTTGTC
TCCAACAAATGCTCCCAACTAGTGCTATTGTTTAGTGCCATCTAGCTAGGAACAATGCAT
TCCATCAAGTTTTATCATCATTTAGCTCTTCAATAAGACAACTTTATTTCTTAGGGTATT
TCAAGAAAATTCTATTAATCATAACACTCCTAGGCACAAAATTAAATAATTCAACATTAT
AAATAGGTTCCTTCTTTATCTTGTTAAAAACTAAGTGAACACTTATCATCTTTAAATATC
CCTTTTCTTTTCTAGAAGAGGGACCCATATTCACGATAGAAACCTTAAATCCATAAGCAA
GTTTCATATTTTTATTATTATAGGTTTCCTCACTAGTTTATGGAAGAAAAATATATACCC
AAGACATTTATAACCTCTTCCAATTTATCAATCCTAGTGAGACTTTATTCTACTCTATCT
AGAATTGATTATTTTTCCTTTAGCAATATGAAAGCATTCTCCGCCGTAGAGCCTAACTTA
GTTACTTTATTATGCACCTCTTTATTCAAGTTTTCAAATTTCTCAATAGTTGGTATTTTA
TTTTCAATAATATCCAATCTTTGCATAAGATGTTCCAATCCTAATTCAGTTTCATTGACC
TTAATCAGTAGATTTGCAACTAAAGTTCCCATAGAATTAAAAGCATCTAACGTGTGACTA
CTCAATAAATTTGATCCAGTCATAGTGTCAGGCAAAAAATCTATACCAAGTAGTAATGCC
AACATAAAACTTTATGAGAACAATAGTGATGGATTTCTTGCGAGTAGATCTCTTGTGAGA
ATCACAAATCTTGTACCAAGCATCTTTCAAACTCTCTCCACCGCTTTGTTGAAAATTGAG
TACTTCAAGCTAGGGTGTGGAGCAATAAGTGAATTGCTTGACATGATAGCAAAAAAGAAA
AGTAACAACACAATTTTTTTGGTATTTTGGAAAAATTTACCAAGTAAAGGGAAAATGGTA
TCTAGGAAAGACAAAAAAATAAAAATAAAAGGGTTTATGTGACAGCACCTAATTTGATAG
AAGCAGACTCCCTGGCAACGGAGCAAGAAATTCTTCTGCAGCCCGTGTAGCAGTTGTTGG
ATTTCCCCAAAGAGGAAGAACGAGGGAGCACAACAACACAAAATATTTCCCTCAGTTAAG
GACTAAGGTTTAATCTAAAAAAAAGAGTCTACAAACTAACAAGATAAACAACACCTACAC
ATAAAATAAATAAATGTTGCACCCAACTATGCAAGGGGAATGTCAATCCCCTTGTCTTAG
TAGTTGCAAGGTTAAAAGCAAATCGTGATAGATAGTGATATGGGAAATGGAAAAATAGTA
AAGGTAAATAAGAAGCAACAATCCAGCAAAAACTATAGATAGAGAATGGACCCGAGGGTC
ATAGGTTGACTAGTGGAAACTCCCTCGAAAGCACGTAATAGCATGGTAAACAAATTACTA
TTGGGAAACTAACAAAAAGTAGTATCCAAAACTATGACCATTCATGGAATAATCTTGTAT
ATGTATCACGTCTGTGGCAAGTAGACCGTAATTCAAATGCATCTACTACTATTACTCCAC
CCTAAGACCGCTATCTAGCATGCATCTCAAAGTATTAAGTTCACTAAAAAGAAGAGTAAC
ACAATAAGTAACATAACATGATGTAGACCGAAAGAAACATAGAAATAAGATTGATCCCCA
TCGTTTTATCCTTAGTAGCAACACAACATCATGTGCCTTCTTCTCATTCTATCAATGGAA
TATACATCACCGTGAGGTTGAACCCACTATTGTGCACCACTCCCTCTGAACAAATACCCA
TGTATCTTGGCCACAGAAGACAACTAACTCAAAAAGCATACATAGCTAGTCAATCATACA
ACAAAGAAACTTCAAGTGATTCAATTATATTAGTGAATAATCTGATCATAAATCCATAAT
GCATCTGATCCCAAAAAACACACCATAAGGATTACATTGGACTGATCTTATAGAACATCA
TTGGATTGAAGATTCAAAAGTGAGAGATAAAGAAACATCTAGCTACTACTTTGGACCCAT
AGGTTCTGACAGAACTACTCACATATCATCCTAGAGGTTGCATGGTTGATAAAGAGGCCT
CCTGTGTTGGTTTCTCCCTCGATAGATCACTGGAATATGGCTTTAGATGATACCACTTCG
AAGTAGAGGCTTGCGACGGCGATAAAATTCTATCGTCTATCTCTCTAATGCTTTCTTGAA
TTATGAAATTTATAGGTGGAGGAATTAGGTCAAACGGAGCAGCCAGGGGCCCACAAGCCC
AAGTAGAACATCCACCCCCTGGCCACGTCACCTGCCCTTGTGGTCGACTAGTGGGTCCTC
TCGTGTATCCCCAAACTTATAAGGTCCTTCATAATTCATACTTCAGAAAAAAAATCGGCA
AGAACTGACATCGTATTTGGACCTTTCTAGATATGGTTTTTCTGTAGAACCAAAAAGAGG
AGCTGACACTTGATAGTAAATTAATAAGCCAGGCCATAAAATAATATAAAATCATGTATA
AGTGATAATATAATAGCATTAAACTATCAAAAATCATATATATGTTTGAAACGGATCATG
CGACCAATCGATGATGGTGGCCTTCGATTACCAGCGATGAGGACGACGATGAGTGCGACG
ACGCAGTGCTCCTGGGCTCACGATCTTCAGTGGGGAGGAAGAGGGTGTCAAGCCGGAGAT
AATGGACAAGGCGACAAGGTGAGGGGAGCATGGCGGCCACGAGATTCATGACATCGTATC
CATGGGGGTCTTAGGCGTGTGGTCGAGAGCGATAGAGAGGAGGAAAAAGTGAGCGTCGAG
ATGTGGAGTGGAACCACACGATTGTGTGTGGCGTTCTTAGCCGGTTCTCACCAACGGCGA
CAAGCAGGAGGTGGCCGAGACCGTGTGTGTGTGTGTCATGGCACACGACTTCGTGCCTTC
TCAAACGAGGTTGAAGACGAGCATGCTCCTCCTGAGTTAGGCCATCTAGGGGGCATGTAA
GTCACCCATTCACTTTTTTTTTATTTTCTTTTATCTGTTTTTGTTATCTATTTTCCCAGT
CTGTTTTTAATTTGGTTTTCAAACCAAAATCATTTTTTGCGGATAAAAATTATTATGTGA
GCTAAATGGATTAAATCAGTGCCACACAAAAATGTTTCAGAATTATTGAAGCTATAAATA
TTTTATTGGATTTTATAACCCCAATTCAAATAACTTAGTGTCTTAATTCAAAGCCCCGAA
TAAATTCTTGAAAATGTGCATTATCTTTGGTAGGGTTTTCATCTTATGCCAAAAATAATG
AATTCGTTTAAGGAAATTTTGGGTTCATTGAAAAGATTTCAATTAAATCTTGTTATAAGA
TACTTTTTGGGGTTTGATCAATCTCCATTTCAAGTTTAAAAAAATTAGACATGATGAAAT
CAAGATTAGCTAGCCTAGTGCATTACCGGACTATGATTCTGACAGGCCAGGCAAGGCGGT
GACGTGTACAGGATCGTCGTCGTTTAATGTAAGTTATGTTCAAACGTCAATGAAATTTGT
CAAGTAAGTTTGATAAGATTAGTCCGGCGGTTATGGCTGGATGACCAAGTCCACATCGTG
AACTACCTATACACGGGTGAATATCTAGTGCTCCCGAAGCACCTGAGCTTAGGTGCTCAG
TCACAGATACGCACAAAACGAATATATTTTAATTAAATTTACTTTAACTTATATAAAATC
GAATGTTAAACAAAGTTTACAAGTTGCCACGCCTCAGCCATTCGATCTTAGATCAAACGT
GTATAGTCAGAAGCTTGTGCTTTAAAAAAAAGAAACCTCAAGGAGTCCGATAATTACGTA
TAGATCTTTCACATCTTTTATATCATCATTGGATCTAGACCGAGTGGTGGAGCACGAGAG
CATCCTTAGGTGCTCGTGGAGCACACGATATTTTCCGACCTGTAGACATGTCCTCTTCTT
GATTAATAAAACTCGTTTAGAGCATTTGTTATGAGACCCCTTGTATTTGTCTTAAAAGTC
AGGATAAACCGTTCAATCAACGACCGGTTACAAAATGAAGTAAATCTCTCTCGTTCGTTT
CAAATGCCCGGAATAATGGGCGATGTAAGGACTTAGGGATGCGTTCGGATACCTTAGGTC
AGTTCGTCATGTATGATGAGAGCCACTCTGGATCACTTTTTTTTTTCCAACAATCATGTG
CAAGTATGGAAGTGATCGGACATATGAAAAAATTTATAAAAAGTGCGAGTTGCGCGGATA
AATATATGGGTTCAAAAGAAACGCGCCGGGTCACACGCGCATGGAAGTATAGGGACACGT
ACGTCACCGTTCGCATTCATATTTACTATGTTCGGCGGCTGTAGATGTCTTATTCTCGGG
ACACAGCCACGTCGCCAAAGGCTCATCATATGCATGCGAACGGTGACGTACGTATCCTAC
AGTAAGGCCGGCCACGCAGGCGGCAGCCTTCTGCCACGTATGCCACACGTGTCGCATCCT
AAAGTACAAGCTGCCCTATTAAATCATCAACCACACTCGTCTGCATGCGTGCGAAACAGC
AAAAGCAAAGCAAAGCAAGCGGCAGAAAGCAAGCTGAAGGCACGCAGCACCTCAGCTACC
CAACAACAATCGATGGCTTCATCCGGCTACCTCAGAGCGGCCACTCGCAGCCTCCAGGCG
CTCCTCCTCCGGCAACGCCCAGCTGCTCCGGCCACAAGTGCGACACCGCGCGCGCTCGTC
GCTTCCTCGGCGACACGGCGCGCATCGACGGTCGCCAACCCGCCGCTCGGGGCGGAGCCT
TTGCCAGAGGACGCGCCGCGGCAGGCACCGCCGAGGCTCGGGGAGGAGGACCCCGTGGGA
CCTCCCACGCCGACGCCCAAGGAGAAGATAACCGGCACACCGCCGACGGAGGAGGATGAC
GACGGTGGGCTACCCGGCGGAATGCCGGAAACGACCCCGCCGCCGGACGTGCCGCTGCCC
CCTGCCTCGCCCGATGGCAGCAACGTCTAGCTCGCATGGCCCGTCTGTGCGCGCTTGCTG
CGTAGCTCTTGCATACGGTGTTAGTGTGTACATACATGTTGTAATGGAGTACGTTCTACT
TTTTCCCATACAGAGCACCGACATGTACACTGCTAGCTGTACGGTGCGCACATGGTGTTA
GTGTTTGCCTGTTCATTGTTAGACTTAGAGATATCTCTATCTCTTCCTTAAACCGAATTC
TATCTGTATCCCTTTCTTGTAAACCTAAGGCAAGGATTTTACCCAATATAAATAAACATC
GCGGCTCCTTTCGAGGAGTAAGAACGCTTCCACTTGACATGGTATACAGAGCCAACCTCT
TCCCATCTATCTAGCCACACCAGAAACCCATCGATCGACAACACCGATCGCCATGTCCTC
TTCTTCGGCCACCGTCGCCCTGAACCTTGGAGCGCCGCCCGCGAAAGCCCAGGTAATGCC
AGGCCTGCGCTCCTGCATCCCGCAGAAACACACAGCAGACGGACAAGACAATGATCATGG
TGCCTAATCCACACTATGGCTGTCCAGAGACCAACAAGTTCTCAGCCATCTTTTCAACTC
CTTATCAAAGGAAATCCTCGCCTTTGATTTGTGGACTGCCATCATCATCATGTTTGCTTC
GCAGTCCCAATCTTAAATTACAAATTTTGATTTGTGGACTGCCATCATCATCATGTTTGC
TTCGCAGTCCCAATCTCAAATTACAAATTTTGATTTGCCATCGCCATCAGCAAAAAGGGC
TTCATGTCAAGCACCTCTTACATCGCCAGGATGAAGAGCCTAGGCGATGAACTTGCTGCT
GCAGGCCGGCCTGTCTCTGATCCAGAGATGGTGGACTATGTCCTTGCTGGTCTAGATCGC
GACTACGACTCGGTTGTTGCGGCGATCGGCGCTGTCAAAACCTCCATCACCGTCGACGAG
CTAATCTCCGCCTTTGATCAAAGGGTGG
