Contig Data
morexGenes
Links



Map Locations of contig_442323 (3681 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_442323

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60261 4 2467 bp MLOC_60261.1 Available Available LOC_Os03g56960.1, FRAME:+3, EVALUE:0.0, 13103.m06236 protein PPR repeat domain containing protein, putative, expressed





CDS Structure of MLOC_60261






Contig Sequence (3681 bp)

>contig_442323 3681 assembly3_WGSMorex_rbca.fasta
CTCCGCGCTCCTCCGCCACGGCCGCCTCCCCGACGCGCTCGCGCACTTCGGCCTCCTCCC
GGACTCCGCCCCGCTGCCCGCGCCGCTCTGCAACTCCCTGCTCGCCGCGCTCGCGTCGTC
CGGGTCACTCGCTGCCGCGCGCAGGGTGTTCGGCAGAATGCTAGTTAGTTCTGCCGAGCT
AGACACTGTCGGCTTCGGGGTGTTTGCAAAAAATGTGGGCAGGACGGACGGGCTGGACGA
GGTCCTGCGGCTGGTGGACGCGGTGCACCGTCGGGAGGGCTTGATCAACAAGTCGGTTGT
CGCAGCGATGGTTGTCGATGGTCTGTGTCGGGAGCGGAGGATAGAGGATGCTTGGCGGGC
TCTGGAGGATATGAGGTTACGTGGATGGAAGCCGGATTTTGTGGCGTACAGGATTGTGTC
CGAGGGGTTCAGGATAGCAGAAAGGGCAGAGGAGGAAGGGAGGATCTTGAAGCAGAAGAG
GAAGCTCGGTGTTGCACCAAGGAAGGTGGACTACAGAGAGGTTTTGCTTGCGTTGGTGTC
CAACAGGCAGATCTCTGACGCGAAGGAGATGGCCGAGGCGATTGTATTAGGCGATTTCCC
AATTGATGACGATGTGTTGAATCTCTTGGTTTGCTCGGTGTCCGAGGTTGATGCTGATGC
TGCCATCATGTTCTGCATGTTCATGATAGGCAAGGGGAGATTGCCAAGTATAGAGATGCT
TGTACAACTTTGCGAGAGCCTTTGCAAGAATGGCAAGGGCAATGAGATGTGGGAGATGTT
TAGAGTGCTTTTGGATAAGGGCTATTGCACGAGTGAGAGGGAGTATCATTTGGTGGTGTC
ATTCTTGGGCAAGGCAGGGAAGGTCAGAGAGGCATATGATGTGATAAAGGAGATAAAAAG
GAAGAAGCTAGATCCTGGCATTTCATCATACAATTCTCTCATGGTAGCACTCTGCAGAAA
TGACCTCCTTAGGCCTGCTAAGAAGCTGTGGGATGAGATGTTCACCAGTGGGTCTAGTCC
AAATCTGCAGACCTACAATATACTTATAACAAAATTTGCAGATATTGGTGAAAGTGAACA
AGTCCAACAGCTGTTTGATCACATGGTCCAGAAAGGAGTGACCCCAGATAGTACAACATA
CACATCAGTCATTACTATGTTGTGCCAAGAAAACAAATATGAACAGGCTGAGGAGATCTT
CAACAAATCTGTAGCGCAGGATCCTAAACTAGCTAGTTCAGTGTTAACTGTCTTTATTAT
TGTACTCTGTAAACAAGGTATTCCTGTCCTCGTTATTAGTACGCTTGCCGTTTTAGTTAT
TCTGTTATCTCCTTGTAAATGTCGCCATTGGAATTTTTTCAGGTGGCTTCAAAGCAGCAT
TGGGTGTTATGTCAAGTCTGCCATCCACTATTGAGAGCTCGAATTCACATGTCATTCTGT
TGAAGTGCCTAACAGATGTTGAGGAAATAGAAATGGCTTCTGAGCACATAATGTGGATTA
GACGCTACTGCAGCTCTGCTTTTCAGAATATAATGAATGAACTCATGGCTTCTCTTTCCA
CTTCTGCTAGCCTTCAACCTGTCAGGAAGTTGGTCTGTTATTTACATTCTCAGGGGCTTG
TTAATGAAGTTGGCCCATGGATGAAGTTGATAGAAGATGATTATGCTTGAACCATAGTTT
CAATAGTCATATCATAATACCGCTTGTCCATTTTGCCAAGAATGTCCGAACTGTCTTGAG
ACTATTGGAGGTCAACCTTGAGCGCATTAATGCAGAAAATGAGGTTGATACTTCCCTGTC
ATGCATTGAGCTCTCAGAATTACGAATGAAAAAATGACCGGAGATTTTTTAACAAAGATC
TGCTTAGTGCTGATCTATTCTGAGCAATCCTGAGGTCTCATTTCTTTCGCATTGCCATTT
ACTGTAGATCCTTAGTATCCGTATTCTAATGATTATGTGACTTCCGTAATTTTGTGCCAT
CATTTTCCATTTTTTGCCCACAATTATCATCAAGACAAAGAATCTAGCACCATATTGTGG
GGAAATGATTCATCTCAGCTCCAGTTTTGTCTGATTGCAGGTTTTGGGCTACTGTTCTAC
TTTGCTCCTATTGCAGGATAAATCTGGTGTTTGTTGGTCTTATGCTTGGCTGGTATGATG
TGGAGATGGTTCGGGATTACAATGAGCAAGCATAATGAAATCTACCTTCATCCGAGGAAA
CAGTTCATTATAATGGTTCTGCCGATGGCGGTGATAGTGGATCAGAATGAGTTATGATGG
CGTCCTACATTGTATCTGAGGCCCCTGTTGTGGATTCAGATTGATTTATGTCATGAAAAC
AAGCGCGCATGCTGCACTCCGTTTTTGAATTGTGCGTCGAGTTTCTCTCGTTTGGCCAGA
TATTCTCTGATTAAGAGTGTTCTGTCGCCATTTTAGATGGCTCGGTAGATTGTCCATAGA
TGCTCATAGGTATGGTTCTGGGTTTAACCCCATCTGTTACTGGAGCATGTTGTATACTTG
TGTCATCTTCATTGACTGAAGCACCAGTTAAAACCATTGTGAAAAAAAGAAGATTTGTAT
AATTCTGTAGAGCGATTAAATAACAAAACTCTAAATGTCCTTGTATTGGATCTTCCATAA
CAAGCCCATAGCATACACGCTTCATCACTCCAGTACACCGTCAGCTCAAGAGACCTGCCT
AGTCCGTCATACTCCCTTCGTTTCTAAATATTTGTTTTCTTTAGAGATTTCACTACGTAT
GAATGTATATAGACATAATTTAAAGTATAGATTTACCCATTTTGCTCCGTAGTTGAATCT
TTGAAAAAACAAATATTTGGGAACGGGCGGAGTAAATCACAACCAGGCCACATCACCCAG
GCGAGATGATGCTTTCCTCATACAGTATGGTGTCCGTTGAGCATGTGATGTAGTCATAGA
CCATGCTGCTGCCACTAAATATGTCCCGGACGTCACCGGTTGCTAGGTTGTATGCACACA
ACCTGGAAGACTTTTCAGTTGAGCCAACCAGTAGGGTCGTACAAGGAGGTGTTAGATATA
ATCCCGTAGGATTAAGCGGACCGGATCTTAACGCCTAGAAATTAGATCACCTAATAAAAT
AACCAGAGGAAAATATTAGGGTTCTTACCACCAATGAAAGAGGCCATTGGTGTAGTCGAT
GTGAAGTCCCGTGCCTACTCATTGCAGACGTGATGCAGGCTCGGGGCAGACAGTCGCAGC
GGGTAGCGGCGTCCCTCCGGACACCACCGGCACTGCCCTCGAATAGGGGTAGAGCTTGGA
GATGATCTTCCCGTCGTGCAGCGCTCCCCCAGATCGGTTAGGGCTTTAGGGATGTTGGGA
GCAATAGTAGACCGTACGTGAATAGATCTCGCACGCACGTGCCGGCTGCTCCCCACCCTT
TTATGTGCGCNNNNNNNNNNNGACCAAAACCACGTTGGTTAGGGTGCCCCCGATCAGGGC
GCTTCTGTTGTGACGAGGGAAACGTTCGTTGGACCGTGGCCCCTCTCTTTCACGTTACTT
TATGTTTATCCTTTATCTTCATTTTTCTTTCTTTCTTTTCTCTATAGCCCGTTGGGCCTT
AGATCAAATACCAACATTCTCCCCCTTGATCGTTAGGCTCATTAACTTTTGTCCATTCTT
CATAGGAATGATATACCAGAG