Contig Data
morexGenes
Links



Map Locations of contig_442194 (3025 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_442194

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60230 1 346 bp MLOC_60230.1 Available Available LOC_Os05g22260.1, FRAME:+2, EVALUE:9e-50, 13105.m02251 protein crooked neck, putative, expressed





CDS Structure of MLOC_60230






Contig Sequence (3025 bp)

>contig_442194 3025 assembly3_WGSMorex_rbca.fasta
CTTGTCGATCCACAGGATCTATCACCCCCTGCACAAGAGAAGCGCTACTGGCAGAGGTAT
ATATACCTTTGGATAAACTATGCTCTGTATGAGGAACTTGATGCACGGGACATGGAGAGG
ACCCGGGAGGTTTATAGGGCGTGTCTGAAACTCGTTCCGCACAAGAAGTTTACGTTTGCG
AAGCTGTGGCTGATGGCCGCACAGTTCGAGATAAGGCAGAAGAACATGAAGGCTGCACGG
CGAATTCTTGGCAACGCGATAGGTATGGCGCCCCAGGGGAAATTATTCAAGGAGTACATT
GAGATCGAGCTTCATCTCGGCAATTTCGACCGCTGTAGAATTCTGTATGAGAAATATATC
GAATGGTCCCATGCAAACTGTTATGCCTGGAACAAGTATGCTGAATTCGAGAAGAACCTT
GGCGAGGCTGATCGTGCTAGATCGGTATATGAGCTTGCTATCGCTCAGCCAGCTCTTGAC
ATGCCCGAGGTTCTATGGAAGGAGTACTTGCAGTTTGAAATTGATGAAGGCGAATTTGGT
AGGGCGAGGGAACTCTTTGAGAGACTGCTTGATAGAACAAAGCATCTCAAGGTATGGATC
AGCTACGCCGAATTCGAGGCCTCGGCTGGCTTGGGAGGAGACAATGGAAGCGAGGTGAAT
AAGAACCATGCTGGTTATCAGGAACAGCAGATCGAGCGGGTCCGGAGGTGTCGAGCTGTC
TTTGAAAGGGCATTCGACTACTTCAGGACTAATGCTGCAGAGCTAAAGGAAGAAAGAGCA
ATGCTCCTGGAAGAATGGCTCAAAAAAGAGTTGGGTTTTGGCGATCTTGGTGATGTCGCC
CTAGTGCAGAAGAAGGTGCCAAGGAAAGTGAAGAGGAAGAGACCACTGCCCACAGATGAT
GGCTCCAATGTTGCGTACGAGGAGTACGTTGATTATATCTTCCCTGATGAAGTCACGCTG
GCATCGAGCCTCAAGATATTGGAAGCTGCTTACAAGTGGAAGAAGCAGAAGACAGATGAC
ACAGATGATGACTGATCTACTCAAGCCTGATGTAGCTGCTGAGTAGCACGGATGGAGAGG
TTTTTTTAAGCTATTCAGAAGCTTTCCGAGGTCATGTATCTTGTTCTCAGATCCTGTTCT
CCTGGGAGCTGCTCATGTACCTCTTCTTGATAGAAAAACAAATCTGGTGTCTGTAACAAA
AATGGATGTAACGTCAGGTGTAGAGTTTTGATGTGGAAATGGCAATAACTTCTCTGTATC
TTTCAATCAAGTAAATTGCTACAGCAAGGAACTGCTATCAAGTAGGACTATATATATTTT
TTTGAAAGAAGACAGAAGATTTGCCTCATCGATTAATTAAAAAATACTCCTTAAAACACG
TGCAAATACGAATTAAATACGTAAGTACTCCTTAAGTACAGTAGCAGATTGGTAAGTACA
GTACTATTTGTAGACCATGCCGTCGTCGGTTTGCAGCAGCTTGTCTGGCTCCAGCCTCAG
TATCCATAATCAGTATCCAGTCGATCTGATTTATGTGTAGCTACACAATACGGTTCTGGC
GCATACAGCCTCCCACTTGCAGCTACCTTCCATCACGCAGCTCAATGTCCCCACCTCTTT
AGCTTAAGTGATCTGTGCTGAGTTTCTAGAAGCTTTAAATTTTGACCAGAAGAGATAAAT
ATACTGACGCTCACTATATTTAAGTCGAAAATCCATTATGGTAACTAAACTTTGGAATAC
GCTTATTACGATCATTATATATGTGTTGAGTTCAGTTGGTCAACCTAAGCAACATTGACT
AGTCAACCTAAACAACATTGACCCGCTGCCGCTGTTCTGCTCTTCCTCCCCTCCCGCTCC
CAAATGGTCGCAACCTTCTTCCTCTCTGTGCCCTTCCCGCTCGCCCGCCTTAGGCACCTC
GCGCGCGCCGCGTCTGCCAGGCCGTCGGCCGCCCCCCTCGCGCCCCTCGCCTCGGCTCGG
GAGGCCTCGCCCGTCCTCCCAGTATGCGAAGAAGAGGGCGGGCCGACGACGCCCAACGAG
AGCGGATCTAGGGAAGGCGTAGTGCGAGGTGGCTGGGGACGACGCATGCCCATGTCGTTG
ACATAGCCGACGCTGGCGTCACCCACGTCTTGCTGCCTCCGCCCTCACACTTTATTTCCC
CTCAGGGCAACATGCTGGGCCGACTGTACGACCTCGACGCGTAACGCCTGACGACCGCCT
CGACTAGGTCCCCGACGAGGTCTGCGGCGACGACACCAAGTACTCGGACGACACTGGGCA
CCGCGACACCGGTGATGGCTTCGGCACGGCGCCCGACGTCGACCACCTGAGCCCGCAGGT
GCCCACATCCGATGTTCGGGCGCCTAATATATCGACAGCGAGCAGCTCTGTTAAGTGTCA
ACCAACCTGAGGTCGGAGGTGCCACATATGACATGGAAGTTGGTGACAATGTGGCCGAGC
TTGTCCCAGACGAAACCGAAGCCGGAGCCCTTCGGCATTTCGAGCACGTCCAGCCTGAAG
GTGTCCTGCCTACACACAGAGCCAAAACAGAGGCCCCAAGCTTCTTCGCGTCGGCCTGCA
GCTTCCGCGGGGTGGCGACGACGAACTCGCCCGAGGGGAGGCGACGCGAGGGGTACGCTC
AAGTGTCTAGTAGATCTGTGAGGGCCCTTGCCGGTAGCAGCGGCGGCTAGGGAAGGAACG
GTGGGGTCTGGCGGCTAGGGTTTTGGGGCCCTCGCAATTTGGCAGCTATAGCTTCTCTTA
ACATCATATACCTTCAAAAAAAAAATCAGCTTCTTTTGTGGAAAAGTTTTGTGGACGTTT
TTTCTTGTGTGTGTGAACACTTGCTCTCTCCTTCCCTTTGACACGTCTTCGTGCACTTTA
CTTGTTTTACAAAGCAGACCCCATTGCATGGTAGATAATTCACCATGGTCCCGAGATCCG
GTAGCTCAGTATCATTCACGGCAGCCAAGATATCCCATCTTTGACAAGTAATTTATGAAA
AATGGAACCTTCCAACTAAAGGCGG