Map Locations of contig_442170 (3629 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_442170

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60223 2 1476 bp None Available Available None
MLOC_60222 1 987 bp MLOC_60222.1 Available Available None





CDS Structure of MLOC_60223






CDS Structure of MLOC_60222






Contig Sequence (3629 bp)

>contig_442170 3629 assembly3_WGSMorex_rbca.fasta
AAGCTACTGGTTTGGCTGTGGAGAAAGTGAGTGGATAAGGCGGAGACGAAACGAGCGGCT
GGTCTTTCTGTGGATTTGGTTAAGCAGACGGGCGGCCGACCGGTTTTGTTTAATTACTAT
TTTTTAAGTAAAAAGAAGGGCAACAGCGAAGGGTCGTTGGATTAGCGGGGAGTACCGATG
GGAGCAGCCTCGCGGAGCAGGCAAGCCCCGTCCCTAAGTAACGTCCAGTTTTGGAGAGTA
ATCTCCTTTTACATCATATACTTCAACCTTTTCGGTTTATAGGACCATAAAATCTTATCA
ATTAAGGTATACTTTGAGTGGATGGCACGTGTTTTATGTTTTGTGGATACAAACCGGCCT
AATGAAATATTTTTTCACTTATTTAACTTTTAAGACAATAAATGCAGTATCCTCCCTTTT
ATTTTACTAAACTAGCATGATGCATGTAGAATATGATGCTTGCATGACCAATAATTCTTC
CATTTTCATTAAATATGACGTGGGATTAAAAGCTTTTTAATTCAATGAGACTAAAAATAA
CTTTAATATAATGAAAACCTAAAACTTTTGAAATGAGCCTTCTAAAACCGAAGAGGATGG
AGTAAGAGCATCTACAACTGGCTTCCTCATATTCGTCTCAAACGTCTGGGCAGGTCGTTC
GGTCAGGGACCGGTCACAAAAACGCGATCCAATTGGACTCATATACCGTCTCAAACGCCC
AAACTGACCGACACCCCTAATATCCTTCTCAAATATGAGGACGATATAAGGGTTCGCGGA
CGCGTCCAATCAGTCCGCCGCGTAGAACACGACCCCCCTCAAATCATTTTTTCTTTTTTG
TTATTCATTCTTTTTTTTCTCTCTCTTTTTCTACATCCATAATGTGTAAGTGATTGGACA
TATTAAAAAACGATATGCAAAATGCGGTTGCGCGGATGAAAAAATAGAGGCTTAAAACGG
ACACTTTCGGTCATTGTTCGGACGCGCCCGTCAGTGTATACGGATCATATTTACTAAGTC
CAGTGTATATGCTCTAAGAGCTAGTATTTGCTTCCTTTTCTAGTACAAGAGCCAAAAGGC
AGAATTCGGAAGCAATTACTCCATGTGTGACCTGGACAGATTGGGTGTCCCATAGGGCAT
AGGCCATAACCCCTCCGGTGCCAACGGCCGGCCTTTGGGCGAAGCTTACTGACGGTGCCC
CGCAGGAAAGATGGCGAGCCACACACCATCCAGTCGTCCACTCTCAGCGGCCAGTGCGAG
CAATCAGCACTCTCAGTAGACTCGATGCGTGCAATGCATAAACAGACGAAGAACAAGGAC
GGAAACGCACACCATGTTTGGTTTGCGTAGGAACAACTCACAATGTCCAGCGGCCGGTGG
CCGAAACAGCGGAAGCAACAAGAAAAAAAGCGAAGCAGCAGCGGAAGACAAATCATCTTC
AGAAAGCGAAAAGCAAAGCTACGGGCCTACGGCGCGGCATGCGGCCGCGTCGACAGCTCG
CCGTGCGCTTAGGCACGGGTGGTGGTGATGGTGGCGTGCGCGCGAACCAATATTTAGCTT
AACTAGCAACAGATCTGGCGACGAGCAACTGGCTGGATAGGCCGGCGGGCAGTGATCTGA
TCTCGCGGGCGCGGCGGCCGCTGTCACGGGTGCGGACCCTCCGGGTTGTGCCGGCCATTG
GCGCCGTACCGGGGATAGTCCTCGATGTCGACCTCCGTCACCACCCTCACCGGTCCTCGC
CCTCGCCCTTGCTCCTCCACGGTGGTCGCCGTCCACCCGCGCGCTGCCTCCTCCTCCTCC
TCCTCCTCCTGCATAAGTATATAAGTACCACGGATGAAAGTGAAAAGGTTGATCTCCAGT
CCAGTTTTGCTACGTGCATCATCTCGGCAACTTAGAACATCAAGTACATAAACAAATCAA
TCGGCGGGGATCGAGAGAGGGGAAAATCAAACCTGTTCCGCGGCCTTGTCCAGCGCAGTC
GCCGCTCCATCGTTCCCGTCAGCGTCAGGGTCAGCACTCGCTGCAAGGATTGACGAAGCG
ACTGATCCGTAACTAAAACATACCCTCGCACCAAGCAAGAACAGAGACGGGCAGTATTCG
CCTACGGCTGCGAGTAGTTAGTAGTGCGTACCCGCAGAAGCCGCGGCGCCGAGGCGAGCA
AGGCAGCACAGGGAGAGGAGCACCAGGAGCGCCGCGACGAGGCGCCGTTGTCGTTGCTGC
TGCCGCGGCTGCGCCATCACATTGCCAAGCGCCACCCAACCACAAACACCTCTCTTTTCT
CTCTCTATATATCTCTCTCCTACTCTTGCGCGCACGCGCGTGTGAATGAAGCGGGCAGAC
AGATATTGCTTGGCTTCTCGTCTTGGCCGATTTGACTTGTGCACAGTGGCCGCTTTATAC
AGAGAGGGGAGCGTCGGCTCATACGCGCGTGCGATCAGTGGTTAGTGGGGGGCTGGCTGT
GTGCGGCCCTTCCCGCAGCGGCAAACGGCCGTCACATCGGGCCTCTACGTTACCGACGAA
AACGCAAACGTTCGAAGAGCCGTCTGGATAGATCTAGGTGCGAACAAACGTACGAAGTAC
AAACGCAAATGTTTGACTGTGGACACACTGATCACACGGAGCGAAGGGGTCCGGTCAACC
GCCGCATTGTTTATCGCCTCTTTTGCTCTGCGCGCTGTCGGCCAAGCGCAAGACTTTTGT
TGGCATATGCCAAGATTCCGGGTGCGCGCCAGCCACGGCCCTCGTATTCTATTAAGCCTG
GGATCGCCGCACCAACTGCCTGTTATTTAACCGTTTGAAAAATGGCGAACTCGAGCTTAG
GATCTGCCCCCCACTTGTGTGGTTATGATTTTCCATAACTAAATCGCGGGGTCCTGCTGA
TCACCAGTGATCACATGGAAAAACCCCAATTATTTGTCAGGTCTCATGATTCGAGGTTTG
TCTCATGCTTTCAGATTACCTGGTCGGTGTTTGGCTTTGGCTGTCATATGCCGATCGACC
TCTCATCCTTCAGGCAACAGTTTCCACTAAATTTGAATTTCTGCACGAAATGGCAATTAA
GCACTACATTTCGAGTGTTGGAGTTGTGCAAATTAAGCTGACCAGCGTGACGGATTACAA
GCTCGCCGTAACACTCGTCGGACACCAACCATGCGTTATACTCCACGCCCAGATTTGCCG
TCTCCTCGGCCTGCTTTGCCTCCTACTCCGCACTTATCCTTGCCTCTTGCTCCGTGTCCA
TATTTTCCCTAATAGTGTTACTTCATTGATCTCCTTCTTAATTCTCATAAGTCATTTTGA
ATGTTCCTTCAATGTATTTTCATTCATCAACATTATCTTGGCACCCTCCGTGTCTCGAGC
AAGTTGCAACGGTTAGATTCATCTCTTTTCCAATGGGCCCAACGGCCCATTGGACCTTGA
CTCACGCCCTCATCGAAGGCGTCCAGCCCAAGTAAAGCTGGTGGGTCCCTGTCGCGCAGT
GCTATATATAGAGGAGGTGGGGACCATGGCACGGGTTACAAGGTTCGTCGCCGTTACTGG
TTCCTCACTCCTAACCCTAATCCGATCCAGAGGGTAGCACTGAAGCGATGGGTAGTCCAC
CGCCGCCGCTGCCACATCTCTCTCCTTCC