morexGenes - Barley RNA-seq Database

Contig contig_442123

Source Contig contig_442123

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_442123 (1259 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_442123

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60204	1	261 bp	None	Available	Available	None
MLOC_60205	1	676 bp	MLOC_60205.1	Available	Available	None

CDS Structure of MLOC_60204

CDS Structure of MLOC_60205

Contig Sequence (1259 bp)

>contig_442123 1259 assembly3_WGSMorex_rbca.fasta
CACAATAAGTCCCAATAAGTCCCTTGTGTTTGGTTTAGGTGGGACTTATAGGGACTTTTT
TAAGTCCCTAAACCAATAAGTCCCTGGAAACAAACACCCTCTAGTCACTCCTTTTCGGTT
TACAGGGCTCAAATCTGAAATCTCATCAACCAACATAGATAATGAGTTAAGGAATGTATC
TTGCACTTTACAAAACTACCAATTTAGATTAATTACAGTGCATGCATGCTTGGCCACTAC
ATGAATAGAAACATTACATGCATTGGTGAGTTCCTTTTAAATTCTTGCATGCAAAGATTT
AGTCTGCCTTATAATCTCGATAGAAGATGCAGATGAGCCCTTTAAATCCGAAAAACAAAA
ATTAAGACAAGCCCTCTAAGTCGAAAAGGAGAGAGTAGATGATATGGCATCTCTCTATAG
CCTGCAGCCGTCTACATTATATTAACCATGCTCTAACCACCAACACAGGTGGCACCGGCT
AGAACCTTCTACATTAAATTACACGAATGGGACGTCATCAGTGAAGTGCATGCTATATAT
ATAAATGTAGTCATGCCTGTGCTACAAAAAGTGTAATGGATCTGTTTTAGGTTTAGGTTA
ATTTAAATAATGTAGCCATGCCTATAGTAATTTGAATATAGACATGCGATATATGCTAAT
TTAAATAATGTAGCCATGCCTATAGTATTTTTTTTAACAGATTGGTTTAATCGATTTAGG
TTAGTCCGTGTTACTCGTGCATTAATTTGAATTTTGATTATGCCTATGCCAATTTGAATG
GGGGATGCACTTATAGACCTTTTGAATTATGGAAAGAAGGGGGGTCGTTCTGACTCAATT
CATGTCAACTTTGTCGAACCCTTGAGGCTAAAAAATAACTTTGTCAAACCCTTTTTCTCA
TGCGTTCGCTTTAGAGATTTATTGAAGTTCTTTTTTTTGAGAAAACGCAAAGATGTGCGT
TTCTTTGTATTGAAAAGAGGGAAAGTCAGTCTGAGAGGAGACGATTACAGCAGGTTACAA
GCAGTTTCAATGAACATCCCAGGATGGGGGCNNGACTACCCTAAGCCCCTTGTCCCCGGC
CCTAGCCCAACACTCTCATCTTTGATCCCATCCGAGAGCTCGAAGAGCGACAGAGTGGCA
TGATCAAAAACACACGCATTCCTATGTTTCCAGATCATCCATGGAACTAGCAGCGTGGTG
GACCTCAGCGCCTTGCGGAGTGATGGTGGAGTTGCATCTCTCGCCCTAATCCACCAATC