| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_44182
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_60090 |
4 |
2962 bp |
MLOC_60090.1 |
Available |
Available |
LOC_Os05g33630.2, FRAME:+2, EVALUE:0.0, 13105.m03486 protein inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed |
CDS Structure of MLOC_60090
Contig Sequence (9048 bp)
>contig_44182 9048 assembly3_WGSMorex_rbca.fasta
CCACAAAAAGTATGGCTAACAAAATGGACACCACAAGTGTGACAAGATTTGGCAAAAAAT
TGAGTGTATGACATGTGGACCATATAACTAGAAAATGTGGCAAGCCACAAGTGTGACAAT
GAACCAAACACATGCCTAAGGTATTGTGGTATGACTAAGGTTAGGCATGGCAGCCTTAGG
CTGAAAACCAAACAGCCCCTTAATAGTAGTACACGGTACAACATACACAAAAACATGCAT
GCGTGTGCTTTTTTTTTGTGGCGAGGAAAACGTGTGTGTGTATCTTGTACTCTAGGTTTG
ACTCTCACATTGCTCCTGTCACCAGCTAGCGAGATATTTGCGATGATTCCATCAATTTTG
AAGTCTCCCAACTCCTGTATCTAATAATCTAAGTGTGAACCAGTGTATACGATGGCATAG
GTGTAATCTTCGATAGTGAGCGGTCACGGTCGACCCAGAGATGCGCAGTCGGGATTTCCC
TAGTGAAATCCCCCGGATCGATGAAGTCAACGGTTCTTGCCAAAAAAGAAAGGAAGATGT
AGTCAAACGGTAACGTGCGTGTCCCTATACACCTGCCAACGCGCCAAAAGATCGTCGGCT
TTGTGAATCCCCCTTGTCCCGGCCAATTTGCTGGGTCGGTCGAGTCATTTTCGGCCTCTC
CAAGAGACCAAGATAGAGGTGGACTGGACAATGGAGGTCCAGCCGGGGGGGTCCGGGCGG
TCACTCCAGCCGCAAAAATGCCAATGCAAGAGACGATGAGATGAGGCATAGGCCACCATG
GAAGTTGGAAAACGACCACGGCCAATACATTGGTCACGAGCCCGCGTGGCCATACGATAA
AATTTATCCCCAGCCCCGTCGCGATGGAAATGTATCGACGTCTCATCGCAGCCAAAAACA
AAAAACATTTTTCATGGTAGATTATGCCCGTCGCCTTCCGTTCTGGATATTGTTGGATTT
CATAAGACTGTCTACATGAGTAACCCTACATCTACGTAAATTTTATTATGCACTCCGTCT
GCGTATTAGGCCCCCTCTTATTTTGAGCTAAAGTTTGATGTATTAATTAATAAAATATAT
ACTATTTGTCATAAAATTATACTTTTTCCATTCAAAAATACTTAGGGGTGTGCTACTCGC
GTTTGCTGGCTGATCTTTTCAGAAGATCAGTCGGGTTGCGAGCTGTACAATTTGCTGAAT
CGAGCAAACCAAATATGACTTCATGACTGTAGTTCTGCAACAAAGGTCTTGTTGCAGAAT
TATTTCTACAACATTGATCTTGTTGTAGACTTCTTTTGTTTTGTTGCGATTTTTTTTGCA
ACTGAGGTTTGGTTGCAATTATTTTTTGCAACTAAGGTCTAGTTGCAAAAAAAATCTGTA
ATAAATGTTTTGTTACAAAACATAAATCTATAGTAGACCATTGCAACATCGTATATGTTT
TAGAAACATAATCTTTGTTGCAGAACCGCATAGTCACTTGGACGCGTGTCTTACGGGGGA
GGTGGCTGATGCCGTCATTATAATTCGCCGGCTGATGGTTAGCTTTTTCCAAATACTTAT
CATAGAAATGTATGTATCTAAATGTACTTTAGTTCTAGATATATTTATTTGTATACATTT
ATGTGACGAGTAATTTCGAGCGGAGAGAGTATTAAAGACCTCTTTTGAATACAAATCCGG
CAATATGTTTTATGTCATATACTTTATGTTTTATTAGTCAAATTAATGGTTAAAGTTTTA
TTCAAAATATAAGGGGGGCTAATAAATTCAGACAGAGGCAATACCTTACAGATGAGCCGA
CACGGAAAGATTTGATTGGAAAAGAAAAAGGCATAGTCCCATCAATTGAAACTTAAGGGG
GGATTAGTTAAGGATAGAAAGTTACGTAGCCTTTTCTAGTCCATTCTTAGGTCTAGCATT
TTTGTTGTTTATACCCTCTTATTTCCAGTTTCCAATCAGGTCGGCAAGTAGTAGTTGTTC
GTCAAGAAGGAGGAGGCGCGCCGCGTATCATGCGACTCAAGTCAAGGTGGTGAAGGAGGA
GGAGGTATGCGCCGCACATCATGCCCCCCGAACCAAGGGCAAGGTATGTGTCGCCCCGTT
GGGTCGTGCACCGCCTATCATCGTGCCATTGTCAAATGTTATGTTGCCGCTTGCTGCAAC
TCCGAAGAGGTCATGACCGCCATCCCATTGATGGAGTCAAATCCATCTTTGAGGCCAATG
TCTAAGCAATGAATACATAAGGCTATATCTAGTGACCATGCATGAGACCTTACCGCGACA
CCCTCTTCTACTTACAACGTGTGGAGTCGCAAGTTACATCAGCCAAGGCCTTCCCTTCCG
AGGAGGTCTCATTGAAGATGCCACCAATAGTGATATTTGAGTAACTTTCCCATTAGAAGT
ACTTTATAACATTATTAGGTGATATTTAACATCTATGAACATGCGATATTATGAGATGTT
GAATTTTAAGACAAGAACGTGTACGTGGATAGGTCCGGACGTACACGTAATAAGATGAAG
ACCTAAGATATTAATTGTATTACATCTTAATACTAAGAAAAATATGGATTGCATATTAGG
TAGAATATAATTACCAGGTTATACTACATTTGTTCTTTCATATAATATGTATTCACCTTT
TAATAAAAATCTACATATAATGTAAGGTGCATTTGTTCTAATTCCTCGTAATTGCGTTCT
TGGCCCTTTAGAAAAAAGAAAGATCTCTCCCTTGATTGCATGCATCTCTTTTTGTAGAGA
AAAAAAAGAAACTATCTCTTTCCCGATGAAGTGTATCACTTAATTTCCTACTCCCTCCGT
TCCTAAATATAAGTCTTATTAGAAGTTTCACTAAAGAACTGCATACAGATGTATATAGAC
ATACTTTAGAATGTAGATTCACTCATTTTTCTTCGTATGTAGTCTCCTAGTGAAATCCCT
AAAAAGACTTATATTTAGAAACGGAGGGAGTAGCCTAAATGATTTACTTCCCGCTAATCA
AAAAATTAAACAAATATAATTTCGTTCTAAATTGTCCATCACTGTGTGAAAATAATACAC
CTCACATAAATAAATGAAAAGGCTATTTAATAAGAACCCCGAAAAAAAACATTTAGAAAT
ATATATTAATTTAAATCCTTGAGTTGTTCTTAGTTCCTCACATCTCATATGATGGTGTCC
AAACAAAATAGGGCCGAGCTTTCCATCTGAGCCGTCGATGGATGGATCGGTTGACGGTCC
AAGAAACGTGCTTATCTTAGCATTTGTGTGATTAATAATAATCGTACCCCCACACAACTG
TTCCCAATCCCCTCCCATTAATGCCCACGGAGAAGGACGCGATCGAACCATCTCTCCCAT
AAGAGGCGCACCCATCATGCACAAAGGCGTAGCCAGAGAGCTAGGCACCAACTGGCAACC
GCCCCCCTAGTTCGTAGCAGCAGCAGCAGCAGCAGCACCGCCTTCTCCTCATGGAGAAGG
CGGGGAGGAAGAGTTCACCGTCATGGACGGCCGCCGTCGCTCTGGTATTCCTCTTTGCTG
CCGTCGGGACGGCCGCGGCGGGGGCACATGCGCCGAGGAGGATCCTGGTGGACACGGACA
TGGACACCGACGACCTGTTCGCGCTGCTCTACATCCTCAAGCAAGACCGGTCCCAATTCG
ACGTCAAGGTAATCTGGTACCATGCCCTCCTCCGTCTCCTTCTCGCGCTGCATGCTCAGT
AATCGATCTACCAATTACCTGGCCGCGCTCAGGTTCTGCTGATTTACTTTACTGTATATC
TTTTTAGCGAATCAGAATGTTCTGCTGATCGCATCGGCCCGGTCGTGTTCGCTCGTGCGC
ACGTCTTCTTTTGGAAGAAAACGGCCGATGGATCTCCCGCATGCATGCGCGCGCGTGCCC
GGTCTCGAATGATTGTTTGCATTGTCGACATTGCTGATTAGTTAATTATTATAGAGAGGT
TTAAAAGGAAGCGGTTTACTCCCTTCTTAGAGAGAAAAAGAGGAAGCCATTCAATCGATG
GAGAGAGGAAAAGAGGAAGCAATTTAGATAGGACAACGATGGCGCATCTTGGCCTTTGAC
TACGTCGGATTTTCTCTCCCTCTCTAGACTCTACTAGTAGTAGTACATTACTCTCTCTCT
AGTGAGTTGTGATGTGGACGTTCACTGTCTGCCGTAGGCCATTACCATCAACGCCAACGC
ATGGATCGACGCCGGCCACGGCGTCAACCAGCTCTACGACATCCTCTACATGATGGGCCG
CGACGACATTGCCGTCGGCGTCGGCGGCGACGGCGGCATATCGGACGCTGGCGAGATACG
CCCCGACGTCGGCGGCTACCTCCCCCTGATAGACCAGGTACTGAATATATACTGATGGAT
GAATCGGCGGCCGGCCAAGCCACGAATTATTATTACCATTATACAGTAATTTACGAGCAT
GCTAAAAATTACGTCGGCGGCAGGGCATGTCGGCGGCGGGCGGCTGCCGATATCGGCAGG
CCATCCCGCCTGGACGCCGTGGCGGGCGCCTCGACACCGACACCAACGGCGGCCTCCGGA
GGGGCTTCCTTCCGCAGGGACCCCGGGGGTACGCGCCGCTCCGGCAGCCCACGGCGCAGC
AGGTGATGGTGGACACGGTGTCAGCGGGCCCTACCACGCTGCTCCTCTTTGGGACCCACA
CCAACGCCGCGCTCCTCCTCATGACGCACCCGCACCTGAGGCGCAACGTCGAGCGCGTCT
ACGTCCTCGGCGGCGGCGTGCGGGTGACGGGGAACCTCTTCACCGCCTACGGCGCCAACC
CGTTCGCCGAGTTCAATGTGTTTGGTGACCCCTTCGCCGCCTACCAGGTGCTCCACTCCG
GCGTCCCCATCACGCTCGTCCCTCTCGACGCCACCAACACCATCCCTGTCACGGAGGAGT
TCTTCGGAGAGTTCGGCCAGCGGTGGCAGACCACGCCCGAGGCACGCTACTGTTTCCAGT
CGCTGGACCAGGTCCTGAGGAGACACAGAAGGCCGGCGCCCGGCCTCCATGGTAGCACGG
TAAGCTCTGAATTCAGTTAAAACTCTTCCATTTTTCTAGTATCCTTGTCATCAAAAAGAA
TTTTCTAGAATATGTCATTATAAAGATTAATTAATTCATCAGTTAGGAGAAAACCTTCTT
TTTCCTTGTAACTGCAGGGCTATTACATGTGGGATTCCTTTGCCGCGGGCGTGGCTTTCT
CTAGCATGCGCAATGGCGAAGCCAATGGCGCAAATGACTTTACTGAACTAGAGTACATGA
ACATCACGGTGATCACTTCTAACAAACCGTATGGCGTGCGCGACGGCTCGAACCCGTTTT
TTGACGGCCGCGCGACACCCAAGTTTGGTCTGGAGGAGGGTGGTGTTCACAGTGGCCATG
TCCAGACTGGGATCAGAGATAGTTTCTGCTTGGTGCCGGGAAGCAACGCAGGAAGATGCC
AGGTAAGCTATCTTTATGTGTCACTCATGCCAAAAAAATAAAAATAAAATCCATGTAGGA
GTAGTATAAATTCACAGTGAATTGCATTTCTCCTTATAGGATGGATACACCAAGGAAGTG
ACTGGTTTTGAAGGTGTCCGCGTTCGAGTTGCCACGAGCGCGAAGCCAAACACGGATAAC
AATAGCGCGTTTGATAGGGAATTTTCCAAGAGCTTCCTAGAGGTAAGCACTAAACAGTAT
ATATGCATGATTGGCAATTGGCATGGACGAGGTGCAATAATTTAGTACGTACTTATCTAA
ACGAGTCCAGCATTTAAATTAAATTAAACAGTTTGAACATGCATCGACACTTTCAAAGAA
TTTGCATCCAGGATGTCTAATTAAATTTCACAATCTGTCTATGAGGAATCATAAATTTCT
TAAATTGCTGCCCCCTGACTGAACTCTTCAATTGCTGCCCCCTAACTTAACTATTTCCTT
CACCAGGTCCTAAATCTCCCAAAACAAGCTGGTCGTTTTAACATCAGTGCACAGTTCCCA
TACTACAGGGAGGTTCTTTATAAGCCAGATTTCATAAACATGAGCAGGGCAAAGCCAGTT
ATTTTTGACATGGACATGAGCCCTGGAGATTTTGTTTCCCTTATATATCTGTTGAAGGCA
CCAAGAGAAGTTATAGATGTAAAGGTGAGGGAAAATATATCTTGACTGAAAATCTGTTGA
AGGAGCTTTATGCTGTGCTGTTAAATTGCCAAGTTATACTAATAAAAGCCACTTTACTAA
CATATTCTAGGGAGTTTTGGTCAATGGCAATGGATGGGCGAATATCGCAAGCATCGATAT
TGTTTATGACATTCTACATATGATGGGTCGCGATGACATTCCAGTTGGCCTTGGCAATAC
CACTGCAATGGGCAATCCAACCCTTGGTTGCAACAATGTGTATGCTATTCCGCAGGGCAG
TGGTGGATATATTGACTCCGATACATTGTATGGACTGGCTCGGTTATTGCCAAGAAGTCC
TAGAAGGTAAAGAAAAAGTTATGCATTTACTTGAATAAAGGTTTGACAGTGGCACAAAAT
GTTTACACAGTTATCGATTGTATGATCAGTTACACTCCTGAAAGTACAGATGATCCGGAA
CATCGGCAACCACTGGCTTTTGAAGTTTGGCAGTCTGTGAGGAGGCAACTTGGTCCAGGT
GACAAGATCACCCTTCTTACCAGTGGACCTCTCACCAATTTAGCCAACATTTCACTCTCT
GACAGGGAAGCAATCTCTGTGATAGAGGTCAGTATGTTACCTATCTCCAAACCTCTGGCT
TTGATTCTGAATTTCTGATATCTGTGATCAGTGATCTTGACAAACACATTTTCTTCATGT
GCAGAGAGTTTATGTTGTTGGAGGGCTCATTAGAGATGAAGGTCATGAGAAGGGGAATGT
GTTCACTGTTCCGTCGAACAGATATGCAGAATTCAACATGTTTCTTGATCCACTGGCTGC
AAAAACAGTCCTGGAATCCAATATGAATATTACACTCATTCCGCTTACCGCACAACGAAA
AGCTAATTCATTCGGGGCAGTCCTGGAAGCCTTGGAGCAAACCAGGCAAACTCCTGAATC
AAAATTCGTCCAACAGTTGTTCTCATTGTTGAAGAAACTTCAGAGCAAAGAGAAGCTGTA
TCACCATGTGGTAACAGACTGAAAATCACCCCGTTTTTCTGTGCACATACTTGAAACTAA
CTTTTAAAAATTATCAGGCATAATTTTGGTTATTTTTCAAGAAATATATGCACATTTTCA
TGTTTGCAGGATATATTTTTGGGAGAAGTTCTTGGTGCGGTTTACATGGTTCAAGGATCT
AACCTGAAATCCACAGTAAAGCTGAAGCGAATAAGCATCCTTGCCAATACAACGAAAAGC
ACAGATGGGCAGCTTGTGGTCAGCAAGCAGAGTACGAAGCTGGTGCATGTGCTAAGTGAT
TTCAATGTTGGAATATATTACAATCGATTGGCAGATTCTTTAACGAACAAGAAAAATTCT
GCCGTTGTTGCGAGCTTTGAAGAACAAAAGGCAATTTGGAGCAGGCCGCCAAATAACTCA
GGGCCTGGACATAACAAATTCTTATAGTAGTACCGCTTAAAAAAGATTATATATAAGATA
CCAAAAATCCACTTGGAGAACAGAATATTTACGTCTTAGCATCCAAGTAAAAGGAACATT
TAATAGAGTTACACTCTTATGAAGGGTTTTTATCACTTTTGCCATCGGTTGTATAACACT
AATCAGTTTTGCTACTAAATTTTTTCACTTAATCAAATATTCCACTGTTCCATTAGTCAC
AAGCCCAAAAACACCATTACCGGCTGGTCAATACACGTTGACTGTTGGTAGATGACGAAA
ATACCCCTAACCCGTTTGTCATCTTCCCTTTCTTTGTGTTACTTGTGGTGGGTTCATCTC
GAGCATCTCCAACAGCCGCGTAATTGCCGCGCGCGCTAAAAATATTTTGCAGCGTTGAAA
TAGCGATTTTTAACACGTCGAAGAGCGGTGGCTCCAGCGGTCGCCACAAAAAATTACGCG
TGCGAGCCGCTCCAGCAGGGGGCTGTAAAAAAACCCCGCGCGTCCAGCACAAACAACATA
TAACACTTCAAACAAAACCAATTAAAATCAAACACATGAAAAAATAAGCAACAATAAATA
GTTGAATTTTCGGCAAATAGTTTATCTTCCAATAAAATAAATAGTTCGACACTACAACAT
CAAACATATAAATCATCATTCGTTTTGTCGGTCATTCCATGTCCACCATCCCTTGATTAG
ATCCTTCTGCAGATCATTATGGGTTTGGGCACGTCGAATGGCATGATAGGAGGCAACAAA
TCGGGCCACCTTCACAGCACTCCGCTGCACTGGCACGGGATGTCCCAAGAGCTCATACTG
AGAGTAGTCGAAATCTTGGCCACGCTCATTCTCGATGATCATGTTACGCATGATCACACA
AGCGTGCATGATGTATCAAAGGATCTTTTGAACCCAAAATCTAACAGGTCCTCTCACAAT
AGCAAATTGGGCTTGCAAAATCCCAGAATCTCTCTCCACATCTTTTCGAGCCGTCGCTTG
AGCATTGTGGAAATCTAGATTTTTTTTACTTTCCGATTTTTCAACAACTTCACAAATGTT
TGCCACTTTCGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTACGTATGGCCATTT
GCTACAAACTCCACGGGTGGCAGTTCACCATTTGCAATCTTATTCATGAGTGGTGTCCGA
TTAACAACGTTGATGTCATTCAAAGATCTAGGCATTCTAAAAAAATTTATGCCAAATCCA
AGTCTTTTGATCGGCCGCCGCTTCAAGGATTATAGTGAACCCTTTTTCTGGTCGTGGAAT
TGTCCATGCCATGCCTTAGGACAGTTCTTCCAACTCCGGTGCATGTAATCTATTGAGCCA
AGCATACCTGGTGTTAGAGCATATATCTCCATATGTGATTTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTAAGTTATATTTATAGGATTTGTTCATA
