| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_44175
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_60079 |
3 |
3816 bp |
MLOC_60079.1 |
Available |
Available |
LOC_Os08g33910.1, FRAME:+1, EVALUE:5e-157, 13108.m03543 protein no apical meristem protein, putative, expressed |
| MLOC_60080 |
3 |
2678 bp |
MLOC_60080.2 |
Available |
Available |
LOC_Os05g30240.1, FRAME:-3, EVALUE:1e-18, 13105.m03084 protein PPR repeat domain containing protein, putative, expressed |
CDS Structure of MLOC_60079
CDS Structure of MLOC_60080
Contig Sequence (7409 bp)
>contig_44175 7409 assembly3_WGSMorex_rbca.fasta
ACGGAGGGAGTATATACTAGTAAGCTATACCCTTGTTAACAGCAGAGCTAACAGAAAGAA
GGATATATATACATACATACATTGGGCGTATTGTGTATACATTTTAAGCTGAGTGCTGTT
ATGACGCTCTACTTTAAGTGGAGAGTAATGAACATATGTACGAGTCACAAACTTGCAATG
GATTGACAAAACCCTGAAACTTGCAAGATACTGACAAGATGGAAAACGTATCACCAAACG
GTTCGTCTTAAATTTTCTAACATGTCTAAAGTCCAAAAAAAAGATACTGATTTCGCTCCT
TCTGGCTTCAGTGGGTGATGATGAATTACTCACTGAGATCTTCCAAGGCTCTAGGAGGCA
ATAGACATCATAGATATGAATAAAAGGCTAAGTTAGTTCAACAAAAGAAGTGCCTTTGAA
AATGAATCATAATGGCTTTGATTTGTCTTGACTATTGTAGAAAGCATACTTCACGACCTG
CATCAAGATTCTTTTTAGGATTCAGGTTGGCACTATGGGACTACCCTACCAAGTACCAAT
GACCATTAGTTTAAAGACAACAAAAAAGTTCAAGCTTGTGGAAGCAAAGATGCCTACATA
CTTTGAAGAAACAAAAGAAGACAAGATTGACGATAAATGGTTAGCACAAAGAACATGATG
CAGTCATAACGTGAAGCCATGGCCTAAGCCTGCGAGCCACTGGAACTTAACTTGTTTTGG
ATACCTAAAAGCGGAGATGATACAGGGCAACAGCGAAGTGGTGATATGCACTCATCGTAA
GTTGACCTCTCAAATTCCAGTAATTCATCAACAAAGTAGGAACATACAGCTGTGAATTTT
CTTGTCATTACAGTCAATTCGCAAGAACTTATACCTGCAGCAACAAACAATGCTTTGGTA
ATAATACTTTAAGGGCTGTACTTGCTTAACAATTTCACTGAGGAAGTTGCAAAACACAAA
TCAAGGGTGAGAAATTTTTGAAAGATATTGTACACGAGCTGAACAAACATTTAGAGTAAG
GCTGCAGTTTAAATTGAGAAGATATTTGGGGATGGTGGTAAGAAAATTAATTCTAGATGA
AGACTCTAAACATGCACTTGGTGAATGTTGGTTGCACATTGCACTTGCACATGTTTATTA
CAACCATAGCAAATAAAATAGCTGAAGTGCATTTGCAGAACACAATGCACCGCAAATCCA
CAATCATCCTGGCAACAGGCATCGGACAACACGAAACAGACAAGCTGCCTTACAAAGCAA
ACATAAAATACTCGATATAATTAACAGCAGGTAATGAGTATTTGAGTAGTAGTACAAGTG
CTGAGATATGCAAGGAATATGGTTAGTCAACTCATGAATAAATATTATCAAATGGTAAGA
TGACTGTACAGGCTTGAACGTGTGCATATTTTGTACATTCGAACAGCAGAGCTGGACATG
AGCCACTGCTACATTAATCGTGACCAGCATGTGCACGGTTAACCAAACTGATGTACTCGT
TGTTGGAGCAAAGCTAGACCACGCACCTTTCCACTGTGGCAACTCAAGCGATTAAAATTT
AGCCTACAAACTGTGCCTAGAATAAGGACCTTCTGTTCCAACACTCGCTAGCAGAGTCAC
TCACGCTAGTTTATACAAAAGTGCAAAAAGATCACACTGGTAAGGCCATCATTATTAAAA
AATGCAAAAAAAGAAAAAACTGGGAAGGGCATCACAATCTCTGGGTAAACAGTCTGTACG
TCTCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTTACATGCACTCCCACACACGTTGACGC
TTATCCTGATCAAATACAAATTACATGTTAATGCTCCAAAGCATAGACTAGTCAAGGAAA
ACTGCATAAAGTCCGTGAAACATATAAATTTGGTTTCAGATGACATCAAACGAATATAAA
TATTCATTAACATTTTCTTAAGCCAAAGGTGCTCAAGAAGAGTTGCATGGTTTTGGTTAC
TGCCGCATATCGGAGTACTATGTATTTAAAAAATTGTTTATCTGGAGAGGCCGGAATACT
ATGAAACAAAAAAAAAATCAAAACTAAATCTAGAAGGCAAGTGTTGTACAGTTTAAGAAT
GTTTTGACTGCTGCACATGAATATTCTAAGTGTGAACTGAAAGTGACATCCCTTCATGGT
ACTCAGCTTGTCTTTGTTGAGATACTAATACAGCATTAAATTAATCATGACAGCTGCCTG
AAAGGGACTGGCATGCCTTCATGCTACTCAGCATGTCTTAGTTGAGATACTAATCCAGCA
TTAAATTAATCATGACAGCTTTCAAACAGAGAAGGAACTAAACCGAATTATTAGAAGGAA
GACCAAAATCCTTCGGACCTGTGGCCTGTGGACCTCAGCCAGCCGCTCCAGGTAGCTCAA
GTCTCGTATATAAATACACATGGTGTGTACATAGTACACTGCATCACAACATCTGAAGTG
CACATCTCTTGGTCATTGTCTCCACCTTAGCAGCTTCATTCCAAGAAGCCATTCACTAGC
TCACTGCACAAGCCAGTTGCAGAAGTATTCATACCTTTGTGAGAGATATGGAGAGCAGAA
ATGACGTCAAATCAGATGAGATCCTCCTGCCCGGGTTTCGGTTCCATCCTACCGACGAAG
AGCTGGTTAGTTTCTACCTCAAGAAAAAGATCCAGCAGAAGCCCATCTCCATTGAGCTCA
TCAGGCAGCTGGACATCTACAAATTTGATCCATGGGACCTCCCAAGTAAGCAATCTTGCA
TCAACATCTCCTTGTTTATACTACCATCTTTTTTCCCTCTGAATAGACTGGGATGTAATT
AGTTGACTTCTGAGTTTTCAAAGCTTGTATCTTCCAAGGACTAGGATGCCGGTTCGACAC
AAGTTGTTTCACTGATCTTCAGTTAAGTAGGAATAAGGACAGCCTCGTGCTCATCCGTCT
AGCTAGTAGATGTTAACTTGAAAGAAATCAGCGGTGGTATTTGATCATCTTCACATGGCG
AGCTAGCCTAGAATAGATGGATTACTCACCTTACTCCAAAGTCTAACAACTTCACTGTGT
TCCTTGTCACGACAGAGCTTGCAAGCACCAGAGGTGAGACGGACTGGTACTTCTACTGCC
CAAGAGACCGCAAATATCGCAATAGCGTGAGGCCAAACCGGGTCACAGCAGCTGGGTTCT
GGAAAGCCACGGGAACAGATAGGCCGATTTACTCCTCCGAGGACACCAGGTGCATAGGTC
TGAAGAAGTCCCTTGTCTTCTACAAAGGCAGAGCAGCAAGAGGGATCAAAACCGACTGGA
TGATGCACGAGTTCAGGCTCCCTTCGCTCGCCGATACATCACTTCCCAAGAGTAGGCCGA
TCGACAAGAACATCGCGCTCAACGTACGCACTTCAATTCATATTATGTAGTTACAGAGCT
AAATCCCAATGTTATGTGGAATTCTGAAGGCACCTTATCTGTTGCCAAAAACAGGACTCT
TGGACCATATGCAGAATCTTCAAGAAGACTAGTTCGACGGTGGCGCAACGAGCGCTGTCT
CATGCTTGGGGGGCTCCATCGCCTGGGGCAACTGAGCAACATCTCCTCTCCGCCATGCAA
CCGATGCAAACTTCACATTTTGCTTTGGAGAGCTCCACCTGCTCATTGCAAGTTGCAGCA
GTGGCACCATCAAATCAGTTCATAAGCTTCAACGGTGGTCCATCTCCACAAGTCCTCAAA
GGTCCCACTCCCACCATCTTGCCATTCCAAACACCACTGCCATCACACAAGCCCGTGCTG
CGCACTACGCCGCCACCGTTCTTCTTCGACGCACACTTTGGGCAGCCTGAGCAGATCACT
GGATTTGTGACTGGTTCTTCTGCAGATGTGAATGCTGGCATGAGCTGCAGGGACCAAGAG
TCATCCACAACGAAGCATGGCGGCAATTTCAGGAGCTTGAACAATGAACGGGAGGCTCCG
GGGAGACTTGACTTCCCATTCGATTTAGTAGCAGACTCTTCGAATGACTGGGAGTGCAAC
ATACCTTGGGAATCCTTTCTTAGCCCAACACTCCCTGCTGAGATCTCACAGCACTAGATG
CCTAGCTTGCCCTATACGGAGTGGGAGGTGTGCGCCACCTTCACCTGTTAGCATTTCTGT
TAGCAAAGGCACCAGCCATTTGTTCAGTTTTGGATTAGATGTACTGTACTACTCCCTCCG
TACCAAAATAAGTGTCGCAAATTTAATATACTAAGTTAGTATAAATTTAGTACTAAAGCA
GCAACACTTATTTTGGGACGGAGGGAGTAGTAATCTATACCCTTGTTAACATGCTAACAG
AGAAGGATATGTACATACATACATTGGGCGTATCATATACATTGGGTGTCTCATGTTTTA
TTTTAAGGTGAGTGATGGTGTACATTGAGTGGAGAGTAGTGAACATATGACAAATCAATG
GATCAAACATCCTGACAATAAGGTACAACGATTTGGAATGCTCTAAACACAAGAGCTTTG
TCTCTCACCTGCTAAACATTTAACTCGAGGCAACTAAGCCTTTCATCACCACTATCAGAA
ACACTTTTCATTGTGTACAAAATAGCAGCACAACGTCAATTTCAGAGGAGCTCTGCTTTG
TGGCTGTCTTGTCTTTGGTTTTCTGGATTTTCAGGACCTTCTTCGCGATCTTCTGCTCTT
TGGCCGAGAAAGCATGAATGATCCTGCACAACCATAGTTGCAACTTATGAGTACAAGATG
ACAGATTATCTGACTTCACACATTGGCATATATCTAGCTTTTATTTGCTCACCTCTCCCT
AAAAGCAGTTCCAGAAAGCCCTCCACCATAAGTAAGCACTCCTGCGGTTCCTATACAAAC
CTGGACCTCTTGTACTCAGTAGGCCTCAGGTGAGGAATCTGAAAATGAGAACTTGCAGTA
TGAACCTCAAGTGGAAATATTAACATTAAACTATCAGAGAAATGAGTGGTATAAGTAACA
TGACAAATCAGCAATTACGATGCCGCAGATCTTACCAATTGCTTTCAAAGACTAAATTAT
CTCATTCATCTTGCAGTACAATTTCCTCCTACTGCAACCAAATGAAGGGTACATGCACAC
TTAGGTGATAGATGGAAGCATATTTTAGAACCTGCATCAATCTTCTTTTTAGGATTCAAG
TAACTTCAGAGTTAATGATTTGGAGTGAGGCAATGGCGGTATGGGGCTACCAACCACTGT
GTGCCTAGTTTAAACAGACAATAAGGAACTTCAAGCTTGTGGAAGCAAAGAAGCGTGCAT
ACTTCAAAGAAAGAGATAAAATTGCCAACAAATGGCTAGCAAAATGAACATGATGCAGTC
ATAACGTGAAACTGTGCACTAAGCCTCCGAGCCACCAGTTCGTAACTTCTTAGATATCTA
AAAGCAGGGATACTGGGCAACAAGTGAAGTAATGATCTGTACTCATTGTAAGCTGACCTC
TTAAATTTCAAGCATTCATCTACGAAGGAGGACCATACAGCATGTGAATCTTCTTGTCAT
AACAGTCAATTAGCAAGAAGTTATATCTCAAGCAGCAAATAATCTTTGGCAATAATATTT
CAAGGGCTGTACTTTCTTAACAATTTCATTGAGGAAGTTACAGGACGCACAAATGTAAGA
GTGAAATCACACACAAAATTTAAATGTACTGTGCATGACTAGAACAAGCATTTATTGAAG
TAATGCTGCACATTAAATTGAGAAGATATTAGCGGATGGTGGTAAGAAAATTAATTCTAG
TTAAGACACTAAACATGCACTTGGTGAATGTTGGTTGCACATCTGCAATGTATATCAAGA
AGTGAACCTGTCAATTACCAAGTTCCATGAGCACAGCACAGCACACTGCACTCCTGGCAA
CAGGCATCCAACATAAGTAGCAGGAGCAGGAGCAGCAGCACCAGCAAACAACAAGCTGTC
TTACAAGGCAAACATCCAACATAATTAGTTGTAGAAGTCCTGAAATATGCAAGGAACATG
ACTAGTCAACTCATGAACAAATATTATTGACCGTACGGGCAAAACGTATGCACATTTTGT
ACATTCGAACAGCAGAGCTGGACATGAGCCACTACTGCATGATATAGATCGTATTTCTTA
ATTAAGCTACATTAACCATAAAATAAAAGGTTGTTTCCTCGGAAAAGTTGAACCTTGTGC
AGAGTGCAGACTTGCCCTTATAGTAAGATCATCAACCATGTATCCAATAGACAGCATCCA
AAAGTAAGATTGTAGTGGCGGCACGGCGTCGACCATCATCTGTTTCAAACAAGAGATTTG
GCAATGGCATACCATTGTGAATGGTGAACATGCAATGCCAACAACAGATATATGGGCTCA
ATTTGTAGTTCTGGTGTCGTTTTAAACATAAAACCAAAAACATGTTATGAAACCAAAACT
GAAAGAAACACCAGTCTATGCAGTTGACATCTCTGTGATAAAACAATATCATATCAAATT
CATACTGCGTATAAGGTACTCCAAATAAAATTGCTCGTACTGCTAAACCCATCACTAACT
GTCCAGGTGGATATGATGATCCAACTCATCGTGGATGCAAATTCTCAAGCCCAAATATTA
CAATCCTATTATTGACCAATGATGGTCAAATGTGCAAATAATAACAGCCAACAAGTCTGA
AAGTTACTAGAACCCGACCCATTTTAATCGCCCACTTCCGGCTGTTTTCAATCCACTAAT
AGACCGTTCCATCCATGCAGCAGCTTGTTGTTAACAAAGATAAGATTTTTTTTGGCACTT
TCCTGCAAGTAGCAGAACATAAACATCAGCGGGGTCTAAAAATAAGATCAAACAGTTGCA
CACATGGAATAAAATGTGAAATCAAATGGCATGAAGACTGTTTAATTAGGGACAGATGCA
GTACCTTCGCATTAACTTAGGGTATATTTGTTTTGGAGCCCAATGTTGGAAGAAAACTAG
TAATGCTGGTTGTATTTGACAGCCATGTCGTCTGGGGCCTCAGCAGTCTGCAGTGGCTGA
GTGCTAAATGTTGGTCCGCCTTTACGAGAAGAACCAAGCTGATCATGCTCATTTCCTACG
CGGCCATAGTGTGGGAGACTCTGAGCAGAGCCCAAACTAGACTGTGGTGCTTCAGGGGCA
CCAAATGATGGCTGACGAGCACCATACCTAGGCTGCTGCGCTTGATGAGTACCATACCCA
GGCTGATGAGCTTGATGAGCTCCATACATGGGCTGCTGCGCTTGATGAGCCCCATACCCG
AGCGGTTCCGCTTGACGAGTGACATACCCGGGCTGTTGTGCCTGATGGGCGCCATATCCA
GGCTGTTGCGTCTGATGGGCGCCATATCCAGGCTGTTGCGTCTGATGGGCGCCATATCCA
GGCTGTTGCGTCTGATGGGCGCCATATCC
