Contig Data
morexGenes
Links



Map Locations of contig_44168 (3736 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44168

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60073 3 1165 bp MLOC_60073.2 Available Available LOC_Os07g38960.1, FRAME:-3, EVALUE:6e-161, 13107.m04032 protein chlorophyll A-B binding protein, putative, expressed





CDS Structure of MLOC_60073






Contig Sequence (3736 bp)

>contig_44168 3736 assembly3_WGSMorex_rbca.fasta
CAAGAGTTATCGATAGCTTCCATGCTAAACAAATTAGCGGCGGTTCCCATGCGGTGAAAG
TAAAGGTTTACTCCCCTCCACCAACAAACACACTCCAGGGCTAGCCGAATCCACATATGT
CGTCCATGAGGGAGTATTGCACTCCATTTGATTTTTTATTTTCATTTAAAATTTTGTATC
ATGTAGCCAATGCAATGTATCCCATAATAATGAACCAAGTATACATTTTCACTCATCCGA
CATGTCAGCCTGGACACGGTCCGGTCCGGTCCGACGTTTGGACCGGCCGCCGCCGGTCCG
GTCCGGACCAGACAGACCTGGCCAGCGGTCTCATTTGTCAAGATCGGACCGAATTGCTGC
TAGCTCAGTCAAGCTTTTCCGGCTCGTGTGGACCGAGCCCACCTGTCGCGCGAACTCAGG
GAGGAAGGGAAGGCGGCGAACTCAGCGCAAAAATGAAATCGCGAGTGGATGGTGATCGTT
GTAGACAAGACCAAAGGGGGGGGAGACAAACACAGAAGTTTTTCCGGCGATCGAACACCT
TGTCGCGCAAACGGCTTTTCTGTTTTTCACCTTGTCGAGAACTCCAGAGCGACTGTGGTG
CACGCACTACAGCGACGGCTAGCAGCGGCAGGCTGGGAGACATGGTGGTACACCCAAGGA
CTGCCGGAAAGAGGGGTATCCCGACGCCGAGCTCTCGCCGTTTGCACGATGCTCCGGCCA
AGTTGTGACTGCCGAGGTCACCTATGACAACCTACGCGTGTTCTGGTCGCCCGCCTCCAG
GTCAGCGGCAACGAGCGGTGGTATACTGTGAGCACATCGCTGGACATGAAGGAGCACTTG
GCCCAGCAGGTTGCCGTCGGCTTCTCTGCAGCAAGTGGTGTCTGCATTGAGCTGCATCAG
GTATTGTCTTGGTCGTTCAGCTCCACTCTACAAGACGCCACCGTGATGGCTACCACTACC
AGGCCGCGGTGGCTACTGCCCGTGCTGGTGCCTTCCGCAGTAGTAGCCACGGCGCCGCCG
CCGATGACGACAGGGCACGACACTGCTTCTGACGACGGCTCTAGCAGAGGAGACGGCGGC
GAGCGACCTCGGTCCTGCGAGCTATCTCGGTTAAAAACCGGACCGGACCGATGAAGTGGC
GGGCCGAAATCTGCAGACCGGACCGGCTGAAATTTCTACCGGGCCAGGACCGAGCCGGCT
CGGCCCGAGCGGGCCACGAGCGGGCCAGGAAGCCCGATCGCCACGTCCAGGCTGACCGAC
ATGTGTGCTTTACTGTTTTTATAGCTTAAGCAACAACAAAATGTATAAATCAAGAGCACT
TTCATGTGCGCAGCGTGCCACCGCGCCTTCGCCCGCTAGTGTTACTGCCATTTCTGTTCT
AGAACTATTCTTTGTATGACCCGATTCACATTAACGTTACGACCATAGGGTGACGCGGCG
AGAGTCATGGACGATGCGAACATAAGCTTCAAAAGGGTATTCATTTTTTTTTACATCGGT
TACACCAGAGTACAAGTACACATCCAACAAGCATGCATTGCTCCACAATTACATACCATC
ATCCACGGGAAAAATAATCTAATTCCACCAGCGATCTTCTTCCCCGTGGTAGCACACTCC
TCGGATTTGTTGCTAACTCCCAACGTGTTCCTTACTTGGGGGCGAAGGCCTGAAACGGAA
CAGGATCATACATCAGTAGCCAAATCATATATACAAAAGTAACACATAGTACCAATATAA
TGCGTAGCATATGTGTACCCGGAAGATGGTGGCATGGCCGGGGTCGGCGAGGTGAGCGAA
GAGGTTGTCGATGGGGCCGGTGCCGGTGTACTCGGCCTGGAACCACGCGCCCATGACGGC
GAGCATGGCCAGGCGGCCGTTCTTGATCTCCTTGGTGCGCAGCTCCTTGAGCTTCTCGGG
CGAGCCGGTGCCGTAGCCGAGCGGGTCAAACCACAGACCACCGGGGTACCTTATGTTTCC
AACACGCAAAGACATCACCTGATTAGCCCCCACAATAGCACAAGGAGAGACAAGCACGTA
TCAAGTTCGCTTGTTGACGTATGTGTGTGCGACTGTGCGTACCCGACGTCGGTGCCGGTG
AGCTTGTTGTTGGGGAAGATGGGGTCGGTGTTGACGCAGCCTGGCTTGATGATGTCTGCC
CACCGGCGGCCCTCGGCCCAGCCGATGAGGATGAGCTCCACGATGAAGAGGGTGGTGGTG
TCGGTGAAGTACTCCTGCTCCCCGGCGGTGTACCACGACGGCGTGTTGAGGATGCCGATC
TTGGTCAGCAGCTCTGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGC
ACCAGCTCCGCCTGCACGTTCCACCGCAAGCTCTCCGGGTCGGATCCTACACGTCAAAAC
GGATCAAACATTGTTCATGCCGATGTCGCGCCAAGAACAACAACGGATCACTACTAGGGT
CTAGGGTTGAGATGTGGGAGACTCGTCAGGACTTACCAAGACCCCATGGGTCAAAGCCGA
AGTCTCCGGGAAGGCTGCATGCATCAAGAACAACGAGGTGTACACACACTGTCAGTGTCA
GCCAAGAGTCGATCGCAGCATATCTTGGCATGCATGCAAGGGCGCAGCGTGTCGGAGTAC
CAACCTGCCGTCAAGCCACGGGGGAGGGGTGCTCCCGGGGAACCAGATGGGCCTCTCGGG
CGCCGCGGCGCGCACGGCGAACGACGGGCGCGACGCGGCCGCCTTGCCGGCAGCGCCGAG
GAAGGAGGTCCGGGCGCCGGCCAGCCCGTTGCTGGGGAGCGCCGCGACGGCGGTGGCGGA
GGAGGAGGAGACCAGCGCCATCGTTGCTGCACCAGTGCGCGCGCTCGCTGGCCGGCTGTG
CCTGTAGCGGGGGGAGGCGCGCGCGTGCGTGCGTGGTGTGGGAGTGGAATTGAGCGTGTG
GTGCGCGCGGCAGTTTATGGGGATCTAGGCGCCAGGCGCCGGGTGGCCCTGGCTTATCCG
GGAGGAGATAGCGAGCAAGGCCGTGGCGTGCCACGCGGCGTGGAGAATCCGATCCCCTGG
CTACGCCGCGCCGGGGCCTTGCTGACGTGGAGGCCATCCCGGTCGGGGCCTGATGAAAAT
CGGTGCCGAGGCTCGCGATTGGACGACGTGCTCCGCATTTGGCACGCGGGTTGCAGCCTT
CGATGTACTATCGGCATGATGATATGTGCATATATCCACGCAGATTTTCTCTTAAGACTA
CTCGTAATGCTAAGTAACATAGAATAGTATAACATAGATATGTTATTAGTTTAAGTTAGT
ACCTCCACAGTGGATAATAACATTGAGGTAGTAACACTTAGCCTTTCATTTATTAGTCTA
TAGACTCTTCTTGCCTTGGTATCCGTTATGTTACTTCTAGTATGAGTAACATGCTAAGAG
GGTGCTTGGATCTAAGAAACTAAAACTAGTCTGACTAAAAATAGTCTCTTTAAGAGGCTA
AAGTTTTAAGTACCCCTAACTAAAGAGGGGGCTAAAACTAGTCTTGAGACTAATTTTTTT
AGTCAGGGATACCCCTAGTAAAATGTAGATTAGTCCTCTCTCTCCTCATTTAACTCCTTT
CCTTTAACATAGACGAGTTTTGGATTGGAAGGTTTGGAGGATAATAAATGCTCNNNNNNN
NNNNNTTAGTCTCTTTAGTATTTGGATCCAAGCGTGGGTGAGGCTAGCAAGTTTTAGTCC
CACTACTTTTAGTCAT