morexGenes - Barley RNA-seq Database

Contig contig_441524

Source Contig contig_441524

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

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Map Locations of contig_441524 (297 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location

Predicted Genes from contig_441524

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60052	1	291 bp	MLOC_60052.1	Available	Available	LOC_Os02g13840.1, FRAME:+1, EVALUE:6e-11, 13102.m01539 protein citrate synthase, putative, expressed

CDS Structure of MLOC_60052

Contig Sequence (297 bp)

>contig_441524 297 assembly3_WGSMorex_rbca.fasta
GGGTTCCTCGCCGCCGCCGGCCCGCCAACCCTCCCTCCGCGGTGCGGCCATCCGGCCGAG
GCCCCCGCCGCCCCGTCGCCAGCCGGCAGCAGCGCCTCCCACCTCCTCGGCGCCGGCATG
GAGGGCGCGGACCCCACATCGGCTTCACTGGAGTGGTCGCCGGTGTCGGCCGCGACCCCG
GGGACCGCGCCGGCGTGCTCGCCATGGTGGATTAGAGGACCGGGAAAAGGTACGAGGTCA
AGCTTTCGGAGGAGGGAACCGTCCACGCCACAGACTTCAAGAAGGTAACTGGCAGTC