Contig Data
morexGenes
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Map Locations of contig_44152 (5251 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_44152

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60049 1 404 bp MLOC_60049.1 Available Available None
MLOC_60051 3 825 bp AK363216 Not available Available None
MLOC_60050 1 1101 bp AK363216 Available Available None





CDS Structure of MLOC_60049






CDS Structure of MLOC_60051






CDS Structure of MLOC_60050






Contig Sequence (5251 bp)

>contig_44152 5251 assembly3_WGSMorex_rbca.fasta
TTTGAGGGTTGGACCTCTAATTTTTTTTACGGGTTTAAGGATTTAAGGGTTTTAGTCTAC
GCCGTTTTTTCGACGAAAACTGTAAAAAAGCGGTTATTTTTAAGGGTTTGAGGCTTTGAG
GGCTTTACTAGACTTGCTCTTAACCCTGTCAAAGTGACTATACTGCAATTATATACTCCT
ACAGTAGTACCTTGAGCACAATCCACATCTATATCCATAACGAAACCCTTTGATGCTTGT
TAGAAGCTTGAGGGTGCAGCAACCGGCCGGAGCCAGGCGTGACCGCTCGCAGCTTTGAAT
TATCCAGGGCAGGCACGTCAGGCTGCTTAAACATCCGCATCATATATATGGCCATCGCAT
TACGCGACAGATAGACAGACCGAGACAGGCGCCGAGGAAGGGAACAGTCGACCAAATCCA
GCACGTGCACTACATACAGGGTATATAATATAATGCTGCACCCCCACATCCACATCTAGA
TGATGATAAATTGAGGCCTTGTTTGGTGCGCAGGGTTTGAGAAGGTTTGTAGGGGATTAT
TCACGAGGAGATCAGAATCCCCGCGATTCCCCGCATGTCCATTTGATGGACACTGTTTGT
GGTGAGCAAACCCCTTCAATCCTCTCTAACCCCCCTTGATTTTTTCCTGCCCACGCGGTT
CAGAAACCTTGTCTCATGACTCAGAGATTTGACAATTGAGGGGATTTGAGAGGATTGGGT
GAAAGGAAGGGATTCACCAAATCCTCTGAAAACCCCCTCCTCCACAATCCTCCCCAACCC
CTTCCTGCCAAACAAGGCCTGATGGAATCAATCAATCCGTTTCCTTTGGATGAAAGCTTA
GAGAGACGCTGGAAAATAATGCTTCGGTCGCCAAGCTCAAATTTTCTGCAAACTTCACTA
TGGAGCATCCGCGTCAATTTGTGGCCGTCTCGACGTCCATCCAAGGCCTTCATCTTGACG
ATCATGCTGAAAATGACATTGTATGGAAACACACTGTCAACGGACAGTACTCTGCGGCCT
CGGCCTACGCGGCCCAATTCTTTGAAACAGTTTGCTCATCCATGCAGCACATGATATGAA
AAGCTTGGGCCCCTCCGGCCAAGTTCTTTTCTTGGTTGGCTATTTAAGGTCGAATTTGAA
CCATCGATAGACTGGTGAAGACGTGGATGGCCTAACTATAATATATGCCCATTATGCAAG
CAAGTTCAGAAATCCGGATCACACCTCTTCTTCAAATGCCACGCTCACTCTCAAAATTGA
TAAGTGACTGGCATCTTTTGATCGACTTTGATTCTTGGGATTGACACTTGGAGGACTCCC
TTAGCAAATGGTGGTCCAAGGGATCTAACGATTGCATGCCCAACAGGATGGTCATGGAGC
CCCTCACAATGCTTATGGGATGGACCATTTGGAAGGAGCAAAATGCCCGCCCCTTTGAGA
ACAAAAACACACCAACATTCATCTTGTTCAACAATATTCGGTGTGAGATCAAACCGTGGA
TTTTGGTCGAAGCAAAAAAACTGGGAATATTGTATCGGGAGAGCGAGGCCTTAGAGCATC
TCCAACAACAACGGTAAATATCGCGCACACGGAGCGGTTTTGTGTGCTCCAGCGGGCGCG
GGAGATTCCGGCGCGCAGCAGAAAATCACGCGCGCGCGAAAAAGCGGCTCGGCGCGCAGC
CGAGCCGGCCAACCGCACACTCGAGCGCCCCCTTCTTCCTCGCATCCGGTGCCCCGTCGA
CGCCGCCGCACCCTTCTCCCGACGTCGCCATCCCGTCGCCGACATGCCGCCGCATCGTCG
GAGCAGCGCTGGCTACCGCGACGTCCGCGTCCGCCCTTTCGGCATGTTCTATGCGCACAT
CAACTCCGGTGATGTGCGTCTCGGTCTCGAGACGTTCGAGACCGCGTATGAGGCCGCCTG
TGGCGCCTCTCGAGGCCACGCTCGCAGATGAACTTCAACGACGCGCGGACGTGCCAACAT
GCGCAGGACCTCGCGCCTCCGCCGCGTCTAGTAACCGACGAGGACCGTCAAGAACACTGT
AGGCGGCAACGCCGCCTCCTCATTGCCGAGGCGGACGAGCAAGCCATGGCGGAGTCCCGT
CAGCGCTACCCGCAGGACATCGCCAACGAGAACACCTTCTGGGCGAAGAGGAGGGCAAAT
CGGCGTGCGGAACGGACGGTCAGACGTCAACGGAAGGCACTAGCGATATCACAGTGTGAC
CTGAGATAGACGTTGTTCTTTGACGAAGACAATCCTTGATGAGAAGACGCGTTTCTGTCG
ATGTCGGACGACACCACTGAGGAGGACGACTCGAAGTAGTTTCTAGTTATTTACACCGTA
GTATCTTATCTATTTTTTATTTGTATCATAGACTAGTTTATGGTGTTTGGTTGAACTATG
CTATTTGTATCGTTGAATTTTATCTACATGTGGTTTCTTAAATACTGTTTGTATGTGCTT
TGGTTGCTTGCACACGCCATTTTTGCAGTGCTTGTTGGAGCAGCTCAGGTGCGTAATATT
TTGGAGCGGTATTTGGAGCCAATGCTATCCTGCGCACAAAAACATGCTATTTCGACGCTC
TAAAACTTGTTTTAGAACCTTGAGTGTGCGTTTTGTAACACCAATTCTACCCTCTTCATA
ATTAATACTCCCTCCGTTGGAAAATACTGTTGTATTTTAATGATATACTCCCTCCGTCTC
AAAATAACTGTCTCAACTTTGTACTAGCTATAGTACAAAATTGTACTAAGCTCAAGACAT
TTATTTTGGGACGGAGGGAGTATATATTATTTTTTATTTATTTTTGTGACAAGTAATCGC
GAAGGGAGGTAAATCAATCAATCAATCCGTTCCGGACAACGCAAGTAAGAAGAACGCTTC
CACTGACCCACAACTGATGGATCATAATCATGTTAAAACAAAGGGAATCTTAACCTAAAG
TTTGTTTAGCTTGCCCACCCTACCCAGATGCTTGCTACGTACAGCTGAAAACAACAGCCC
AATCATGCACGTTGCCAAAGGATATTGTACGAGGACCCAGGAGATGTCAATGGTGATCAC
CCAATCAATCAAAGTTGCCAGCTCGGACAAGCAGCAGTGGATCATGCGGTCCCAACCCTG
GAGACCCTGGGAACCTCGACGGGGAAGCGGTCGATCTCGTCCATCCATGGGTTCGTCCCC
TCCGCCTCCGGCGCCACCGCGCCGCAAGCGCCCTCCAGACGGCGCTGTTGCACTTGAAGC
CGGAGCCGAAGGCGATCTGCCAGACCCTGTCGCGCCGTCCGATGCGGCCCTTGGCCTCGC
TGTAGGCGAGCTCATACCACAGCGAGCTGCTGGACGTGTTGCCGAACCGGTACAGCGTCA
TCCGCGACGGCTCCATGTGCCACTCCGTGAGCCCCAGGTTCTTCTCCAGCTCGTCCAGCA
CGGCGCGCCCGCCCGCGTGGATGCAGAAGTGCTCGAACGCCAGCTTGAAGTCCGGGATGT
AGGGCTTGATCTTCACCTTGAAGGCCTTCTTCGCCACCAGCGTCGCCATGAACAGCAGCT
GCTCCGACAGCGGCAGCACCAGCGGGCCGAGCGTGGTGATGTTGGTCTTGAGCGCGTCGC
CGGCCACCGCCATCAGGTCCTTGGACAGCGACACGCCCACCTTGCCGGCATCGTCCTCCT
GCTGCGTCACGCAGCCGAAGCACTTGTCGTCGGCGCCCTTGTGGGTGCGCACCGTGTGGA
CGAGCTCGTACTTGGAGCGCCGCCGGTCCGAGCGTTTGTTGGAGAGCAGGATCGCCGCGC
CGCCCATCCGGAACAGGCAGTTGGACACCAGCATCGACCGGTCGTTCCCGAAGTACCAGT
TGAGGGTGATGTTCTCCATGCTGATCACCAGCGCGTACGAGTTTGGGTGCACCTGCAGCA
GGTCCTTGGCGAGGTCGATGGACAGCAGCCCCGCGCTGCAGCCCATCCCGCCGAGGTTGT
AGCTCACCACGTTGCCTCTCAGCCTGTAATGGTTCACCACCATGGCCGACAGCGACGGCG
TCGGGTTGAACAGGCTGCAGTTGACCACCAGGATGCCGATGTCCTTGGGCCTGACCCCCG
TCTTCTCCAGCAGCTGGTCGATGGCGCCGAACATGACGGTGCTCGCCTCCTTGCGCGCCT
CGTCCATGCACGGGTTGGGGGGCACCCGCAGCACGGCGGGGGGCAGGTAGGTGTCCTCGC
CGAGCCCCGAACGCTCGAGGATCTTGCGCTGGAAGTCGAGGTTGGCGTCGGTGAAGGAGC
CGGTGGCCTCGGAGCAGCGCATGAAGGTCTGGCGCGTGCACCGGCGCTCCGGCCCCGGCT
TGTAGCAGGCGAAGTCGACGAGGTAGACGGGGCGGGGGCGGGTGAGGAAGTAGACGGTGG
AGAGGAAGACGAGGAGGGTGGAGCAGACGACCACGGAGACGAGGTTGAACCGGAGCTGCT
CCCACAGGTCGGCCAGGTCGCTCGGGGACACGGTGGACAGCTGAACGGCCACCAGCGCCA
TGAGCGGCGACAGCAGCAGGTACATGCCGTGGGAGATCAGGTGGTGGTACCCCAGCTTCA
CGTACTTGAGCCGCACCGACTGGAGGAAATCCGGCAGCAGCCGCGGCTGCGCTGCTGGCT
CCGCCGCCGCCTGCGCCGGCGTGTTGGCGGCATTGGGCGCCGGAGTATCCATTATTCTAC
TGACAAAAAAGAAAGAAAGAAAAGAACCGTTAAAATTAATTTCTGAAATCCTGCTACAGT
TGTTGGGTTTAGGATGCAAATCGAAGTAAAACCCAAAATCTATCGCGTTCTCGAGCAGCG
ATCGCAAAACCCCGCACGGATTACACATGCAACGAGCACGGAAACTGCTGAAAGAAGAAA
AACAGCTCTCCTCCGAGATCGAGCAACAAGACCGAACACACCAGCTCAGGGGAAAACAAA
TTCAGCGGAGGTCGAGAGATCAGGGACCGCCACAGACAGAATTCCCGAGACCAAGAACCG
CCGCACGACGACAGCTGCTCCGGCGGACACCGCCGACCCACCACGCAGGCAGAGCTCGAG
CAATGCGTGAAATCAAATCGAGACTGAACCGCCAGCGCAGCACAGCTAGCTCGGAGACAG
GGGAGGCTTTGAGACGTACGTATACGTACCCAGGCAGGGCAGACGGGAGAAGCGGCGGAC
TCGGCGACGGACGGAGACACCCGATCTGCTGCGCGCCGCGTGGGAGGACGAGGAGGAGCG
GAAGAAGACTCGAGCCGCTCCGCCGCCCCCC