morexGenes - Barley RNA-seq Database

Contig contig_44124
Source Contig contig_44124
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44124 (6961 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_44124

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60021	1	1135 bp	MLOC_60021.1	Available	Available	None
MLOC_60020	6	1754 bp	AK364799	Not available	Available	None
CDS Structure of MLOC_60021

CDS Structure of MLOC_60020

Contig Sequence (6961 bp)

>contig_44124 6961 assembly3_WGSMorex_rbca.fasta
ATATTTTTTTTGTTGTGATTTTCGTGTTGATTAGGGTTGGTTGGGGGGGGGGGGGGGGGG
GGGGGGGAGCTGTACACGGACCGATGAATTAGTCTTATGTTCTCTCTTGCTTTTTGGCTA
CTTTGTAGGAATTCAGGAAGTACCAGGAGCAGCTTCAATCAACTAGTATTTGTCCTACAA
AAGAGACGCCCTCAACCAGAAGTGTACGTCCAAGTGATGGCCGTCCACTTCGAGTATTTA
CTGATATACCCCAAGTAGAGGAGTTCTTAACACGCCCAGAATTTGTTCTCAGTAAGCAAA
GCTGTGTCCCCCTTTATTTTTTTTTCTGTAACTGTTTTTCAAGGATTGACTAACTTTTCG
GATGGGAATGCACCCTGGCTATTGTTCCTGCAAAGTTTTGCCTTGTGGTTCCTGCAGTCC
ATTTCCTGTCCTTCCTTTCATCACTTGTCCTCCTTTTGTTGGAACATTTGTTCATGTGGA
AAGACACAACATGAAAATCTTGTTATGATACCTTTTCGTTGTACGTAAGGATAAATAAAT
ATTATCATCATTTTGCTGATTTAGTGTACACCTAATGATAGCACTCTGCTATCGTATGAG
AGTAGGTAATAGTTTACTATTTAAGTTGTAAATTATGGTATCGCTTGGTGAATAATGTCT
TGTAATATTTGTCAGTGAACTGAACAAAACTGAAGTTGTGCTAATTTTTGGCATACTCTT
CTAACGAGACATTATTTGTATGCCACTTGGTTTTATTGGCTCCTTTAATATGCTTGTACA
GTCATGGCGATTCATGACGTATCCCTTTATTTCTGCAACATATGCTTCAAAGGAATTAGC
TCCTCGTTCACATCTAACTTGTTTTCCTGCAGCAACTGATCCAAAGGATGCAGACATCAT
CTGGGCAGGCATGCAAATTGATTCTGAATTAAAGAGTTCACTAGGTCTCACAGACCAACA
GTACATGAATCAGTTTCCTTTTGAGGCTTGTCTGGTCATGAAGCACCACCTAGCGGATAC
CATCCACAGGGTGAGCTACTGAGCTGTTTGGTGTATGCCTTCTTTTTGAAGAAACATTCG
GCATAACTTTACTGCTTTGAATTTAGTACCTTTAACGTTAGTGACATCTGAAAACTAAGA
TGAACTCCTACAGGCATGGGGCTCACCTGAGTGGCTTCAACCTACATATAACCTAGAGAC
CCATTTGTCTCAACTAATTGGTGAATACTCTGTGAGGAAACGGGATGGTATGGATAACTT
ATGGATCATGAAGCCTTGGAATATGGCAAGGACAATTGATACCACTGTCAGTGGTGATCT
ATCTGCAATCATCAGACTTATGGAGACGGGTCCCAAGATATGCCAAAAGTATATTGAGTG
CCCTGCGCTTTTCCAAGGAAGAAAGTTTGATCTCCGGTACATTGTTTTGGTCCGCAGTAT
ATGCCCTTTGGATATACTTCTTTGTGATGTTTTTTGGGTATGCCTGAAAGTTTAATGATA
CTTAGTGAATATCTGTGGCCATTACTTGATGATGATATCCACTTATGCAGTGGCTGTTGC
GCATCTATCTTTTCTTATTGTAGGTCAGGTTAGCAAACAATCAGTACACTTTGGAGAAAA
CTAGCCTTTTTGAGTACGAGACCCATTTTACTGTGATGGTAAGAACAAATTTCACTAAAA
TTATACATGTCATTTTATGATACCACATCATGAATGTCAGTTGTGCAGAAGCTTGTTGAT
GTTGTATTGTATCTCCTGTTATAATAAATGTGATTATATCTTCTAGTCTGTAGCTGTATG
CTTATATAGTGACCAGCTGTCAACTTTTTCTTGGTAATAAATGTTTAAGAGTGTAATCTA
GCTCCCTAATTTCTCTTTTCATCCAGAATTATAATGGAAGGATGAACCATATGAATACTC
CAGAGTTCGTCAAGGAGTTTGAGAAGGAGCATCAAGGTTTACAACAGCTTGCATTCCTCC
TCTTTGAATAGCGGTGTCTTATGTTTCTAATTTATTGTCAAATTTTCAGTTAAATGGCTG
GAGATTCATGAAAGCATACGTGATATGATAAGGCGTGTCTTTGAGTCAACCTCAGCTGTC
CATCCTGAGATGCAGAACTCATTCTGCAGGGCCATTTATGGCGTTGATGTTATGCTTGAT
AATAGATTCAAGCCAAAGATTTTGGAGGTATGCCTTGACTACTTTGTATAACTGCAGCTC
ACACACACATACATTGCTAACAAAACCTATCTGAGCCCTGTGCATATCAGTTATGGTGAT
ACAGTGCATGGTTATAGCTTAGTGCTTGTTCCATTCGAGCTAGAAAAACACTTAGGAGCA
TATCACCTATGTTGCAGGGATACTTGGATACGTATCGGATACGCGATACATACGTATCGG
ATACGCGATACGGGGATTCACCCGATACATCAATTTTCTAAAAACATGGATACGGGGATA
CGTTTATATGTAGATATTACATATATTAATTATAAAAAATATGAAAAAAATAAGGAATCT
TCTAGGTCAAAAGCATGACTCAATAGGATTACCCCCTTTCTTTTCTTACACTTGGTCCAC
TTCCATTAGTTGGCAGTGGGATTTCCCTAGGTTTCCTATTCCAATCAGTGCATCGACTCT
CTCTTGCTCACCTTTCGTTTGAACTAGAACATTGACAGACATGTTTCGACATGAACTCAC
ATTCATGTTGGGAATCTTCAAAAGATGCGCCTTTGCTATTGAGGGGATTTCACATCAAAC
GAGGGGTTTCAGGTATCCAAAACGTATCGCAGAAGTATCCTAGGAGTATCAAACATTATT
TTCTTTTTTTCTTTTAAATCAGAAAATCAAGGGATACTTACGGGATACGTATTGGGGCAG
TATCCCTTTCTGAGGTATTCGCGCAACGTAGCATATCACTATGTCAATCGAGATATTCTT
GATGTAGCATTTCCTTGGTCGATTTGGCAGGATAGTAGTATTACGGAAACTGGTAAAGTG
TACGAGTGAAGCAACACCATATGACAATGCTGTAATTTTTAGCTGAATACAGTTTCTTGC
AGACGGGGATGCCCAACTTCATGTTATGGGAATATATTTGGATTGTGATGCTTACCGTTT
CCACATGTTCTAACAAAATGACTACTTAATTTTATGGGAATACATTTGAACTGTGATGCC
TAGTTCTGTTTCTTCATGTTCCAGCGACTCACCACTTGACCATGAAATGCAGGTGACATA
TTGTCCGGACTGCACGAGGGCGTGCCAATATGACACACAAGCTCTCGTTGGAAGCCAGGG
CCCCATCAAAGGCAGTGATTTTTTCAACACGGTGTTTGGCTGCCTCTTTCTCGACGACTT
GACGAATGTGTCACCACTGTAATAGTCTTGTCGAAAAGCTGTTGTAACACCAATGTTCTT
GTACCTTGAGATGGATTAGGGATGTTGTACGTTCATGCATCAAGGATCTGACATCCATGA
AAGGATAGGGCACCCGTGAACTCTGAAATGATATTGTGAGTGAAGCTTAAGATGGAATTT
GCTTGTGTTGCTTGATAAATATTGCTGCTTCCGATTCTAATGTTGCATGCTTATAAGTTT
GAACTATCCAATGGTACGTGGCCAAGTAGTAATAAACTGCACAATGCCATGCCATTGCAA
AACTGCCGCTACATCAGTGAATTTCCTGTTCTACAGGTTTCAGGTGGATTCCAACAGACG
TTCAAGAGTGACTTGAAAAGAAAACCCTCCATCACCAAAAGTATATGTGTCTCATTCTCA
AGACAATGGTAACGTAACGTAGCCAATGCAGCCACTCGCACCCACAGTAACTTCAAAGCA
TCATCTGCCAACTCCTCAAAGCCCAAAGAGCATACAATCATATGCACATGAGCCGTGACT
GCTGAATGTACTGATCGCTGATCATACGTTCGAGGCGTAGCCATGGGCGCCACAAGCAAC
CATGCCGCTCCCATCTCTCGAGCCATCCTTTCGCTCGTGACGATCATCTTCTCCGCCGTC
TGCGACTCTGACCCGGACCTCCTCGTCGACTACTGCGTCGCCGACACGAGGGCCGCCGCC
GGCGCGCTCGACTTCCACTTCAACGGCCTGCCGTGCATCGACCCGGCGACGGCGCGCGCG
GGCCACTTCGCGACGTCGGCGCTCTCGGCGCCCACGGACCCGTCGGCCACGCTCTTCGGG
TTCAACGCGACGGTGACCAGCCCGGCGGCGTCCCTCCCAGGCGCGAACGCGCAGGGGCTG
GCCATGGCGCGCGTGGACCTCGCGCCCGGCGGCATGGCGCCGCTGCACTCCCACCCGCGC
GCGTCGGAGGTGGCGCTGGTGCTCTCCGGCGGCGTGCTGGTGGGGTTCGCCGACACGTCG
TACCGGCTGTACACGCAGCGGCTGCGCGCCGGCGAGGCGTTCGTGTTCCCGAGGGGCATG
GTGCACTTCATTCGCAACGAGGACACGTCGTCGCCGGCCGTCGTGCTGTCCGGGCTCAAC
AGCCAGAGCCCCGGCGCGCAGCTCCTGCCCTTCTCGGCGTTCCGGACGGAGCCGCGGCTG
CCCGACGAGGTCGTCAAGAAGACCTTCAGGATCACCGGGCAGGACGTGCAGAGGATACAA
AGGAGCCTCGGTGGCTCGTAGCCTCGTAGGGGAGATGTATGCCCTCTGCTCGCCTCGATT
TAGTATTACCACATAATATAATTATCCATGTGTTACCACAGGTGGCTAAATATTCTGTAC
GGAATTTCATGATTTATGTATTATTTTATTATTATAATGTGATTACATATTAAAAGTAGA
TACTCCGCGAAAAAAAAGTCATATCGAATGTAGATGTAACATTAGAATGTGTGCCGTGTC
GTTGAAGGTTTTTATCTCGGTAGCTCTGCACCCTTTATTAACGGTGTGACTAATTAGGTT
CTATTTGGAATGATAATAGAATATGATAATCTGAATCATGAAAATAGATTATATAATCTG
GTTTATAAAAATAATCTAGGTGAGTATGTTTGAAGATCAGATTATATAAACTGTAATTCA
GGTTTTACATTGCATAATGATTTGTCTATCCTTTGTTTTTTTTATAGAAAAAAGAGGGTG
ACGGTGGCAATTATCTTTAACTTTATAAAGGTAATGAATCATTAGTAATTCATAATCTGA
TTTTAGCTAGGGTAGAGTAGATTGTGAGTTTTTAATAATCTGTTCATCTAGTTTTATAAT
CTACAATCTACACCATAAACCATAATATGTCCTTGTCCTGTTCCTGTTTGAAGACAGAAT
AGATTATAAAAACTAGATTATATAATCAAGTGGTTCCAAACAAGGCCTTAGAGGGTTGCA
ATATCTTATTCTCACCATTCCTAATATTTCGTTTGCTGTCAACAAGGTGTGCCAATATCT
AGCGAAACCTACTCATATGCATTGGGAGGTGGTCAAGCCCATATTAAGGTACATCAAGGA
TACTATGGCTACTAGACTCTATTCGTTGGTCAACATCAGCGAACACATCAAGGATACAAA
GCATATTGGGACAGATTTTCAGTTCATAACAAAAAAAGGTGGCGCAAGGAGTTTTGGATG
TTCGCTTTGCGTCCTCCGGCGATCAAGTGACAGATGCTTTCACTACACCTGCTACTAAGG
TCATGTTGTTGGAGAAATTACTACATAATCTCGACCTTGTGGCCTGTTCAGATTAAGGGG
GGATGTTAATGTTTATCTCAACATGTAATCAATGTAGTTGACTACAATTTTTTTAAGGGT
GCTACGCCGGTCGAGACCATTTTCATTATAAATAAGAAATATGCAAGACAACGGTACAAC
GGATAGCAGCTAACCACATCCGAGAGGGAAGAAAGAACAACAGAAAGAAGAACAGACAAC
GGGCTACGAACAAAGAACAAAGAACAAAGTAAAGAGAGCCAGAACTGGGCTGTGACAAAC
AACCAACACCAAGAACTTAGCACCATCGCCACCAGCTGTCCGAGAAGAGCGGGGACTAGC
TTTGTTGGATCAGTCAAAGGAGATCCACTGCCAAGAAGACGTAGAGAAGAAGACGTCTGC
TGCCGTGCGCTCACTATGCACCTTGAAGAGTTAGGAAGTCGCGGCCACCGTCGAAGGGCA
TCACACTGCCTAGGAACATCGCGACAGAGAGAGCCACAGACCGTACCGAAGGGCAATGAT
CCTCTGAGACAATCCTGCACCTCCTGTGGGCCACACCATGACCGCCATCGCAAATAGAGA
GAACCAAAGCACTATGCGAGGCAACCAAACCTAAAACGCCATCGAAGAGCAATGACCATT
GAGACCTCACCGTTGCCACGAGCCCCCAAAAGGAGAGGTCAACCATCAACACAGGATGAC
CAAGGCATTGGTCACCACCATAGAGCACCTCCACCGCCGCCGTTGTACAAACCAACAACC
CGAACCAACGCTCCAACCCAGACATCAGCAGACCAACTGCGGATCCATGGCTCCTAGAAC
AATGTCCCAAAGGAGGAAAATGACATCGACGATGGCATCATCGCCCGACCCAGAAAAGAA
TACAAGGCTTTTGCATGGAGCATAGGAAAATAGCGGGCAACGGAAGCTACCCCACGATGC
CTTCATGAAGAGAAACGACGCGCGAGGACGTCGCCATCATAGCTGCCGACGATGTCGGCA
AGAGGCTTTCGCCTGAAGCATCCAAGCCCGGCCATCTCCGCCAACGCTAGCCACCAAGTC
CGGCAGCGCTAGACCTTCCCCATCCTGCCGATCCACGTGAGCATCCCTGCTAGTTCCATC
AAGAGACTTCCGCTATCGCAACCACTCACCTTGGGCACCTGCACAGACAGAGCCGGTCGG
TCTCGGCCGCCACCAGCACCCAATCCCTCACTGCCGGCCACAACACTCCACCACACACCT
ACCCCGCCGACCCTACATCCGCAACCATGGTGCCCGCCGGGCCGTGCGAGCCACCGCAAC
G