Contig Data
morexGenes
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Map Locations of contig_44073 (7237 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_44073

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59969 5 1370 bp MLOC_59969.3 Available Available LOC_Os06g48300.1, FRAME:-1, EVALUE:9e-170, 13106.m05135 protein protein phosphatase 2C, putative, expressed





CDS Structure of MLOC_59969






Contig Sequence (7237 bp)

>contig_44073 7237 assembly3_WGSMorex_rbca.fasta
TAGGGCATAATTCCAACAGAAACTAGGTGAGCAACCTATATTATGCTAACAACAACAACA
ACAAGAAAGTAACAAATACAAAGTAAAGGTAAGAAGTAACCAGAAATGGAACTGATGAAG
ATGAGGATGTGTTACCAAAGTTACTTCCCTTTGAGAGGAAGTACGTCTTCGTTGCAGTGG
TATGGAGGCACAATGCTTCCCAAGATGCCACTAAGGCCACCGTATTCTCATCACGCCCTC
ACACAATGCGAGATGCCGTGATTCCACTAACAATGCCCTTGGAGGCAGCGACCGAACCTT
TACAAANNNNGTTGGAGCAATCTCCACAACTTAATTCGAGCCTCCCAACGAAACAACGAA
GCTTCACAAAAATGGAATTTGGCTTCAAGGTGACGTCAACCGTCTAGGGTGCTNNAACAT
CCAAGAGTAACAAGATCTGCAAGGGATTATTGGGGGAATCAAATTTCTCTGGGTGGAAGT
GTAGATCAAGGTCCTTTCAAGGAAACCCTAGAGTATTAACAAGTTCTGTTGGCTAGGGAG
AGAGATCTGGCGAAAATGGATCTTGACGCAACAATGGAGCTTAGGGTTGGGAAAGGTGAG
CTTCTTGGGGAAGAAGACCCCCTTTATATAGTGTCGGGACAATTCCAATCGTTACCCACT
CACATAGCCCACACATGAGCGGTACCTCCACCCATTAGAGGTAGTACCGCTGCTGGGAGT
GATACTACCGCTGCGGGTGTAGAGCAGCAGATTAAGAAGGGAGACAGAGGGGTGTATTAC
TACCGAGGCGGTACTACCGCTGCCAGGAGCGGTACTACCGCCCATAATGGGTAGTACCGC
CACCCACATCCGTTCAAGATCTGTTGAGACCCAACCTAAGAAAACCCAAGCGAAGCCGGC
GCGGTAGTAATAAGTGGTACTACCTCTCTCTGAGTGGTACTACCGCCCAGAACTACTGCT
ATAGAAATCGCTCAGTTCTACATGAAAAGTGTCGAGATCCCGAGGCAGCGGCACAAGCAA
ATTGTAGTGGCCGGGGCACTACCGCCCGAGAGCGGTACTACCGCTGACCAGGGCGATACT
ACCACGGATAAGAGGTAGTACTGCCGCTTGGGTCTTTTTAGGCAGAACAAGGGCACGGTT
AGAGGCTCCATCGTGGCGGGGAAGAAACAAGGGGGCGATAAAATGTGTATGTGATGATTC
CATCCAAATCTTTTCAACGCGGACCCCCTTTTAATAATACAAATTTTCCTACGACTCAAG
TCCACCGACAGTGGAACGTATGAAATAAAACCGTCTTCACTTTAATACACTGAGGGGCAG
GAATTGTCTTGTGCCATATGTTGAAATACAGGCTTCGTGCACACGATTAGTACGTAATTG
CATTGTTATCAATCACCAAAATCATTAGGATAAAAATATGCCTTAACAAAGGGTGATAAC
GATCTCCAGGAAAGGTAGATTTGACAGGTCTCTTAAATGAACAATGACATTATGAAACTG
ACCAACTCCCAAGAGCAGGATTCCATTGGGGAAGAGATGGTCTATGGTCTCAGCGCACCT
AGCACACATCACACGAGTGTATTCCTCAATGAAGAAGTAATTTGTTTGAGGGAATTCCTT
ATTATTTAGTCCGTTAATCGTAAGCAGCGGAAGAACAATTTATGTTTAGGCTGACAGCAT
GAGGACCATAACCATTTGGTAGTCAATCCTTCCGATTGCGGCCATGTTAATCACTCTGTT
TTGTTGTAACTACTTAAATTGTAAATAGACCTCTTCAGACAAAGGCCGGCGAAAACAATC
TTCCAGATTATTGGTAGTTAGGATATGTCTAGCTGATATTGGATTGTTAATTGCAGAAGA
TTGAATCACCCAGACCCAAACATGGAGTGGCAATTTATTTGTAGGCGTTAAATAATTTCA
AGCAGTTCCTCTATCAAAAGGAACAAAGATCCTCCTTCTCACTGAAAGACAGTGCCCTCT
ATATCTATCAAACTCTTTGATTACTCCTTTGTGGAGTTTGATGATTTTAAGAAAACGATG
TGATTCTTCCTGTTCGATCCTTCTCCGATGAAATGGATTATTACCACGCTTTTTGCCGGC
TGATAAAAAACTTCTTGAGGGTAGTGATTTAATGATTTTGGCAACTTTAATTGAAGTCTA
GGAAAATCCCCTAAGGTAAGGGATAGGTTGCTTTAATTAACTAATCGAGCCCCTTGAGTA
CACACCATTTTTAGCAATGGCTTGTAATGTGTCATCTCTTTCACTACCAGCACCCTTCAT
CATAACTTCTACTCGTTGCAAATACTGTATGCATGAATACCATCTACTGTTGTTCTTTGA
CCAGCACAAGGTGATGCTATGCCTTTTTTTGTGCATTTGAATTCACAAGTACCGGCCGAT
GACCAGAAAATGGGCAGAGCAGATAATTCAACATAACAGATTGCAGTCTTTCAATAGTTC
CAAGAAAATAAGCAGTCCTGTTTAATCTGGTACAGAATGACATTGTGCCATTTTTACAAG
CATGAGGAAGTTCATGCCATCATCAAAGGATGTTGATGGAGTAGATGTTTAACTTGCTAT
AGTTGACTCTAAGGCCCGAGGCAAAGGCAAAAGAATCCATCAACAATTCAGAAGATCCAA
CTTCTCAACCTGAGCTCATAAAAATCAGGGTACCAAAGCACTAGAGGGAAAAGAAAATCA
GAGCTAGAAGACGGAGCAAGTGGTCTTGTTAAGTGCCCTGTGAACCAGAGCAGTTCTTTC
ATCCTCAATGCTATTCTTTTTATCATGTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTGC
GTTAGCATGTTATAAGATGATATCTTTTGGCGTTAGCATCTGTTTCATATTTTTATTTCT
ATCGAACGGTTTTCTCGGCTGAATTAGCATTGTGCTGTGCAAACAGATCGCCGGTCGGAG
ACGCACATTTACAAGACTTGAAATTTGAAGTGAGAACAGCTGAGAACATACATGATCAGT
ACAGGCAATGGTAAACTGGAGTGAAGCAAATAAACACGCACGCAAAGGGCTACACCATCA
GACACACTGCTTGCACAACGCATTGCCCTGTGAACCTACGCGCTTCCAAGAGGAATGTTC
AGTTGCCCGGCACGACCGCACGACATGGGTTGGAGATGAGGAATGTTCACTTGCCCAGCA
CGACAGGGGTTGGACGTTCGTTGGTGGCCGCCGGGGGCTGCTGGTCGAGAAAACGGACGA
CGACGCAGGTGATGTTGTCGGCGCTTCCCCTCCGGGTCGCCTCGACGAGGAGCTTCTTGG
CCGCCTGCTGCGAGTCCACGATCGGCTTCACCATGGCCACCGCTTCCTGGTAAACAGAGC
AGTCATCTCAGAATTCTGCTTCTTGCTAGCTGCGAGTTCAGTTCAGCTCGTACAAGGATG
AGTGATGTTTTTTACCTCGTTGGTCACGACGTCCCACAGTCCGTCGCTCGCCAGGATGAG
GAACTCCAGAGAGCTGTCGACCACCTCCTCCTGTTGTGTTCCAAAATCTCATGTCAGGGA
ACAATGTTTCTGTCTTGGTGACACATGGTTGCAGAACTCTGAAGATAGATACTGACCTTG
ATCTCTGGATCGGCAACCACGTACTGCTTCAACAGTTTGTCACCAAACGCTCGAGAAACG
GCAAGCACGCCGCCTACACGCCATGTACCTACAGATTACATTGCCACTGAACAATGAGCC
GAAAGATTCAAATACCAAACTGGAAGCTACCACTCTCAGAACATGTCAATATGTACACAC
CTGCCCACATGACGAAGCCTCCGGCATCCTCTATCCTCTGCCTCTCGTCTGTCTGGTCAG
GCTTATGGTCCCTTGACACCGCTATAGCTGCACGCACCATCAAGATGGTCAGGATCATGA
TCCATTCATACAACAGAGACATGCACAACCTGATTAATAGCCACAGGTGAGGCACGCCGT
TCCAAATTGCTGGAAACATGATCCGAAAACGATGTCGATCGGCGCTTACCATCACCACCT
CTACAAATGACGGCCCTGGAATCCCCAACGTTTGCCACCACCAGGCGATCACCAACAAGA
ATGGCCGTGGAGGCCGTCGACCCTGCATCTCGGTTGTGGGCGGTATCGGCTTTCAGGAGC
TCTGAATCCGTATGGGTGAAAGTTTCAGCTGCAGAGGAATATTATATTTCAGTGACGAAA
TATCAGTGCCCAATTAAGCAATAGTACGTTCTGCAATGTGTTCTGATCAACAGAATGCTA
TGTCGAATTCAGGGAAACATATATAACAGTACCAATAGCAGACTTGGTATCGGTGAAGAA
CTTTGGGTGCTTGATTAAGTTGCTGAAAAGGTTCTGCTTGACGAACTCCGCCGCTCGAGC
TCCACCATGGCCTGCAGTAACGGATCAGTAATCAGCCATCTCTGCTGCCTAAGGTAGTTC
GCTGACAAAACTCCAAACCCCATATTATCTTACCGTCGAAAACACCGAACAGCCCGACGG
TCTCTCCATCGACGCCATCGATTCTTGTCTCGTGGAAGTCCTCCATGGAAGATCTTTTCC
CTAGGCAGCTCGCATAACCATAGCTAAACTTACCATTCTCACTGCCACGATAAAGAACAA
ATTAATACCATCCACACGGAACAATGATCCGAGCTAAAATCCTTTAGATGCATTTCAGAA
TTAACTCGCCATCGTCATTAGAATGCCATAACATGATGCTAGTATATATACAACAATAAC
AAATTTGCCATTTCCCGCATGCATGATGATGATGATGATGATGATGCACCAAAAGTTAGA
AACCGAACGCGGACAGGGACAACAGCGGCGGTTCACCAAGAAGAACGGCAAAGGTGCACG
AACGAGAAGAAATGGCGAGATCACGTCAGATGGTATACCTGAACCCGCCGCCACTGACAG
GCCTGGTGTCCCCGCGGTGCCCCATCTATCGGCGGAGGATGACAACGGCCGGCCGGATTC
CTCTTCAACGCGCAAGCGCAACACGGCCGGTGATGGCGGGCGGCGACGAGGGAAGAAGAA
GAACCAATGGTCCCGGGAGCCTCTCGCGGTCGTAAATAGGGAAGCTGGAGGAGAAACCGG
AGGCGGAAGCTCAAGGAGCTCGTGCGCCTAAAAGGGGGGCGGGGGGACGTGCGGTGGCGG
GGGGAGGAGCTCGACGGGCGGTGCCGTGCGGGGGCACGTGGCGGCGCGGGAAAGGGGGCG
GGGTCAATGGCGTGGACGCGCCGGGAGGGCCCGTGCAGTCCACGGCTTTTCTTGGATCTC
TCGCTCGACCATCATCATGGACATGAGAAGGGTCGACTCTCTCCCCTCCTTCGTGTTGGT
TTTGGTTTCGTGGTTCTGCGCCATGACTCGGCTCGACCGGCCGGGCGTCGGCGAATCGAA
TCGGGACGGTGGCGGTCGTGGATTAGGTCGTGGACACGGAGGCGCTCGCATGCACGTGGC
GTGGCCATGGGCCATGGCGGGACGAAGGTGTGCGTCTCTGGATGAGTTACACGTGTCCGC
TTGCGGTGCGGCACACGTCCGAGCGCCCAATAAATGGTACGAGTACTGCGCTGCCGGCTG
GCCGGCACGTCAGTGTTTGGTGCCGTGACGAACTTCTAGCGGCGGTGTTGATTCGTACTT
CCTCCGTTGCTAAATACTCGCTCCAAAAGTATTTAGATTACTTTTTTTGAATGGATTTAT
TCAGCAAAAGCCTCGACAGAATCTGTCAAAAGAAACGTTACAAGAAAACTAGGTTTTGAG
TCAAGCCAACATCCTGTCACATCATGTGTGCTTGCTTGCTTGGCACACAGATGCGGTACC
GGCTGGCCGGTCCGTGCACACGTCAGTATTTGGTGCCGTGATGAACTTCTAACGGCGATG
TTGATTCGTACTTCACTACTTTCTCCGATCCTAAATATAAAATATATGTCTTTTTAAGGT
TCTGACACATGATTCTGTCACATGATTACTATATGTAATTCATGTCAATAAATAAGCGAA
TTTTATATTTTCTAAACGTTTTTGGTTTGTTTTCACGTCCCAACGCAACCAATACCATGG
GGTCTGAATAGGACGCATGACAGGCTCGTGCGATAACTGCTCGAATCATCCGTGCGCGTG
TTCTTTTGAAACAGGCTTTCGCCCCGCTTTATAGATAAAGCAAATACTCCAACATCCAAA
CAACCACAACCCAACATAGTGAAGAAAAAGAAAATTGTTGGGGCCAGAACACAATCACGC
CCAAGTGAAAGGAGAGGAAACATAAAAGGCCACCATAGGGGCAAGCTAAGAAGCAGGCGA
ACGGACGGAGAGCCGTCGGGCGGACGTCAGCAACGCGTCCAAATACAGCTGAAGCCGGTC
ACGGTCTCGGGGCCTAACGAGCGGATGCCAGAGCTGCAAGAAGGCAAGAAATTTGAAGAA
CGAGTCAGAGACACGCCGCTGAAACACGTGCTCAATCATCATTTTATTGCGAGTAGTCCA
AAGAGTCCACATCATAGCTGCGAAGACAAACCAGAACAATCGGCGCTTACAGCCAACCTG
AGTGGCCCTTACCTGCAGAAACTCTGCAAGATCATGAGCCTCCCACTCCGGTTCCAGAGC
CTCACGCACAAAGCACCAAAGTGCCTGCGCAGCTACGCAAGAGAACAAAATGTGTGTTCC
CGTTTCCGGTATGCGACACAGGGGACAGATGTCGTTGCCCGGACCATGGCGTTTCAATAC
CTCGGTCCCCGAAGGCAAACGGTCTGAGAGAAGCTGTCAAACGAAAATCTTGATCTTCAG
GGGCATCGGGGCTTTCCAAAGAGGGGATAGCCACGGAAGAACTGGCAACTCGGAGAGCGC
ATGATAAGCCAAACTAACGGAGAATTCTCCCGAAGGAAAGAGACTCCAAGAAATAGTGTC
ATTGGCCGAAGAAACCGGAAGAGGGACTACTTCCTTCAAGACATTCCATTCCTGTACCTC
GGCTGGTCCAAAGGAGCGGCGGAACGCAAAATGCCATCTGTCCTCCAAAGCAGCCGCAAA
TACAAGGATAGTCGGGTCGTCACAAATAGCAAAGAGCCTCGGAAACCGCAAGCGCAGAGG
ATCTCCAGCAAGCCAGGGGTCCAACCAAAACTGGGTCCCAGACCCATTGCACACCGAGAA
CCGCAAACCCAACCTAATATCATCCTTGATGGCCTGGATAGATTTCCAGAACTGGGACCC
AGCCGCGCGCGAGCAGGCCAAGCGTCACAACTTTGTC