Map Locations of contig_44062 (9804 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_44062

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59952 3 441 bp None Available Available None
MLOC_59953 1 1320 bp MLOC_59953.1 Available Available LOC_Os02g08120.1, FRAME:-2, EVALUE:5e-90, 13102.m00934 protein calmodulin binding protein, putative, expressed
MLOC_59951 2 500 bp None Available Available None
MLOC_59950 1 1231 bp MLOC_59950.1 Available Available None





CDS Structure of MLOC_59952






CDS Structure of MLOC_59953






CDS Structure of MLOC_59951






CDS Structure of MLOC_59950






Contig Sequence (9804 bp)

>contig_44062 9804 assembly3_WGSMorex_rbca.fasta
AGATATTTAGGATAGAGATAGACTATGGATAGTTGTTCAAACTACTTATCTCTCTTTGTG
TATTCAAATATTCTATCTCTAGTTTACTTCCTCTCCAAGTTGTAACTCCTTTCAAATCTA
TCTTGTACGCATATCTACAGGTTTGCACCCTGCTATACAACATGCAACATGTCGCCCTCA
TCGGGTAAGACATTTCCGCTAAGTCGCACAAACATGACACATATGTTTGCATTTTCAAAA
GTTATGTTAACCTTCAAATGATATACATACAGTGCATGATGATATACCCTCCAATTACAA
GATGCCTCGAGTCCGTTCATGAGTGAGAGATGAGCTGAAGAAAATGTCGGTAGTCCGAGA
GCAGGGTAGCACTATAGTTATTGATTGACCGATGAGAAACTCTAGCGGAGTTGTCGTATC
GGTGGTCGTCATATGGATACCGAGGTCATGATGGCTGTGTGCAAACACAAAGCCGACATA
ATGTGGCCTTCATATCTTTTCTTTTCTCTTTTTTGGACACACCAGAAATTCACATTCTCA
ATCTTAGGGATTAGAACACTAATTTCAAATACACATTGCATTCCGAAGTGGTTACCTAGA
GGTAGAAAAGTCGATTAGCCACAATTTTTACTAGACTGATGACTTTTTATGTCTTGACAG
AAGCACTGTTTCCCCACCACTACGATGATGAATGCAGTGCACTGGGCATATGCATATGTG
ATGGGTCACCTCATCGTCTAAGCACGTCAGGGTGATGGTAGGACAACCTTTTCTTCGTCT
CATTCCTGCCCGTTGCGGTCGAGGTTGAGGAACACATTTTCAAGAGGGGGATACTCGATA
GGGCGTGATCCATCTCGATGAATTTTACCATATCCATGTTGAATGAGAGCCATCTCATGC
GCTCCTTTATCCCCTGTTAAGTCCATCTGCTTCGATTTGTAATGGAGCCAGATGTCGCGG
TCACTCTCCGTCCACAGTGCCTTCCCAACGGCAGTATGCTTGAAGATTTTGCCTAGGCAG
ACGGCTGAGGCGTAAGCCTCGTGGCGCTCATCACATGCCTCCGTAGCAGTGAGCTCAAGG
GGAGCACGTGGTGGTCTATGTTCGCTGTGTGGGAGAGTGCTTTCGTGTTGATGCAGTATC
AGCTTGTAGCTGTCATGCCATTCAAAATCGATGGCATGTGTTTCTAGATTCCAATCTGGC
CACTCACCAAGGGCAATCCTTCTTCATCACCTCCAGTGCATAAAAAGGTGATCCTCCTTG
CCGATGCCGCCTCATCTAGGATCTACTCTTCCTCTTTCAAGAGTGGCACCCAATCCAGAT
GGGGGAAGCAGCATGACGACGGTGAGAAGGAAGTGGAGGTTGTGGGTTGCGGGATAAGAG
CTATTCTGGCATAGGTCTAGGAACCGAAGCTTGTGAGCTATTCGACCATGGTGACGGTCT
TATATCAAAACAGGCTTTCACCCCGCTTTATAAATAAAGAAACAACGAGCAAGGTACACG
GCCAAACGATACAAGGTGGTGAGGTGCCCTCTTACAAAACCGATCCTAGGATAACCGACA
AACACAGAACAGTACGCAACCGAAAACAAAAAAACAAGAAGATCTGAAACCAACACCACA
CTAGGCCCTGGCACACCTAAGCTCTACGACAAGGACCTGAGGAGGGAGAACGATGCCAAG
TGTCGCTGCTACCAAGTTTGCAATGAACAAAGGTCTTCACCCAGAGCTCTGACACGGAGA
TGAGAACCACGCCTACATCTTCAAGAAGATAACGACACCCGCAAGCGTCGCTGTCGTCGG
TGCCGAGGCGTAGAACTTTCGCTCGGAAACTCTCCCATTCCACTATGAGGTCTCCAGGAC
AAGCACGACGAGAACAAATTCCCACACCGGATCGGAGCATCACTATGTGAAGACAAAGAG
ACACCCGAGCCACATGCCTCTAACCGTCCTGCCACCCACACGACCAAGATGGAGAGCCGC
CGCCACCACAATGTTGCCCACCAAAGAGCCAACCATGCGGACTCTCACCTGGGGACGCCA
CACCGGATCCATGTTCAAGCCATCATCGTCCGCACACATCACGGTGCACCCATCACAGTA
GGAGTAAAAGGCGGCTCCTTTCACTCCTAACCTGAGATCAGCCACAAAGTGTGAATCAAT
ATCTTCACATTACGAGGCGTGGACACATGTGCATCCAGTCAGTCCTAGCAGACCAGGGGA
GACACAACTCCGTGACTACCAATTTCCACCACTGGACAACTTGCATGATGTCATGTCCGT
GGTCTCCAACACCGATCTACCCGACAGACTCGCGATGTCTCGACCACCACCAAGATCCAC
CATACTCTCGACGGTCTTTGTATATACGGTGGGTAAATAAGACGAAAAACATGACGTTAA
TGACCACTAGCAGTTGGCAGACGACCAACCACCACTAATTAACATGCTTCCTGATGCCAT
GTCGTCTTCTACGACATGTTTCATTCGTAGAGTGAAGAAATGGTGGACGAGGAGGGGGCT
GAAACTTTCCTGCGACGTGAGCGATTGGTGGGTGAAGGTTGTGCCATATCAGTGCCTCCG
GGCTTCAAATATGAAGGTTCCTGGATCGAATATGGAACACGCTACATAAGTTATAGCGAC
CAAAGACACGATGGCCACTCTACTAGAGTTTTTTAAGCCAAAATTGTTGAATTGATGATT
ATTATGCAGATAGAACAGGTGAATCTGCTAAAGTTTTTGTTAATGTGTTCTGTTGTTGCT
ATTGGCAGTGCGGCCATCAGTCCATCAAGATTCTTGTTACCAAGTCTCCAGGGCAATCGC
GACGAGAAAAATTCCCACACCGGATCGGAGCATCACTACTGCGAAGACAAAGAGGACACC
TGAGCCACCTGCCTCTAACCGTCCCGTCACCCACACGACCAAGATGGAGTCGCCACCACC
GCAATGTTGCACGCCAGAGAGCCAACCATGCGGACCGTCACCCGGGGCCGTCACACCGGC
ATGCATGTTCAAGTCATCACCCTCCGCCCACATCATGTTGCATCCACCACGGTAGGAGTA
AAAGGCACCTCCTTTCACTCCTAGCCTGAGATTAGCCACAACGTGTAAATCAACATCTTC
ATGGTAGGAGGCATAGACACCTGTGTCTCTAGCCAGTCCTAGTGACCGGGGGATACAAAA
CTCCATGACTGCCGACGGCTGTCACTTAACACGCTTGCACGACGTCATGTTCCTGGTATT
CGATGTCGATCTTCTTGAGAGATTCACGATGTCCCAACCACCACCAAGATCCACCATACT
CGTGGCGGTCTTTTTATAGAGAGCGCGATGGGTCATGCAAAAAATGTGACGAGCAGTGGG
TAAATAAGACAAAAACATGTCCTTAATGACCACTAGCAGTTGACATACGGCTAACAACTA
CTAATTGACACGCTTCCTCATGCCATGGCCTCTTCTACGACATGTGTCATTGATAGGGTG
AAGAGATGGTGGATGAGGAGGAGGCTGAAACTTTCCAACGACGTGAGTGGTTGGTGGATG
AAGGTTGTGCTATATAACTTAAGTGCCTCCAGCCTTCAAATATGAAGGCTCATCGTATAT
GGAGAGCGCTACATAAATTATAGCGACAGAAGACAAAATGGCCATTCTGCTAGAGTTTTT
TTTTCCAGCCAAAATCGTTGAATTGTTGATTATTATGCAGATCGAACCAAATGAATTTGC
AATGAGAAGCTAAGTGCAACTTCCTATCTCCCCTCCCCTCCGCTGCCCCTGCGCGGGCGG
CCAAGGGGCCCCAACCTTAGCTGCCGGTCACTCCCCATTCCACCCCTCCCCTCCGTCGTC
GCTGGAGGAAACCGTCGGGCTAAGCCCTGGCGGCTGAAGGCGGTGGCGGAGGAGCCTCTC
CTTCTCGCGCGCGAGGGTGGCGCGGGGCATCCAGGCGAGCCGAAGTGCGTCCCCAGATCC
GAGCCTCCATGGCGGTGGCTCGCTCCTGGCAGCGAGCGGCGGCAGATGACTAGTGGTGGA
GCTGCTGCATGTAGCCATGGCGCTACGGTACCTCGGATCGGCGGCGGCGTGGAGGGCTTT
GGTGGGCTGGTCAGTTGTGGGCATGGTTGGCCCTCTGGTCATATCTGATCTAGCCAGAGT
GGCTTGCTCGCTCTACGGTGGCGGAGATTGATGGTGGTGTGTGCGCACGATGCGAGACGG
AGGTTCGTCGAGCGGATACGGGTGAAAACCTCGTTCTCGGCTTGTTGCTAAGACCGGGGA
TGGCGACACTCTTTTGTGTCGTTACCTTCTTAAGGGCATCATTGTGGAGAAGCTCAAGAC
CTCTATCCGCTACCTCCGGGGGAAACCCTAGATCAGTAGATCGGATGACGACGGCGGCCA
GATGTTGTTTTCCTCTTGGGGACGTCTTTCTTGGAGGTGTACACGGGCTCAAGAGACCAG
TGGACGGCTTCTTTGGTGGAGCGCTGCTTCATCTTACTCATTGATGGCGGTGGATCTCGA
CGGCATGGCGTAGCGGAGACTCGGCATCTGATGCGCGGAGATGGACTCGCGCAGGAGGAC
ACTTTGTGACGTCATGGTGGCGTCGATGGCAGAGAGGTCTGGTAAGTCGGTGTGTTAGTT
TCTACTCTGAAGATGTATTGGTGGAAGATGACGGCGACGACACATGAGAGTGTATTGAAC
CGGTTTGTACCCTAAACCCAGTATGTGGCTCGGTTGGTGCCTCTGGCTTTAGATGTTAGG
CTTTGGTACAATGTTTGTTTGGTTATAGGCTCGGGCTATCGACATCCTTTCATCAAGTGG
TTGGGAGTAGCGACAGTTGTTGCTAAGATGGTGTCTTCGGACAAACTAATGTACTACTTA
TAAGGTTTTTGTAAATAATTAATAAAATGGCTGCATGTATCGTCCACATGCATAGGCGGG
GTAAACCTCCTTTTCTAAATAAAAAAATGCAGATCGAACCGGTGACTCTGCTAAAGTTGC
TCTTAATGTGTTCTGCTGTTGCCGTTAGCAGTGCGGCCATCAGTCCATCAAGATTCTTGT
TACGCGTCGCGAGTTAAGGTTCAGAAACGACCCCGTTACGGTTGCAACCGCATGAGTTAT
GACCCTTCCTCTCCATACCGTACCATCAAACGATTAACGATGTACTGTGGTACGGAATTA
TATTTGGCGAGAGCACATCACGTGAGCAACCACTCTTCTGATCTTCTCCGCCGTTCAGTG
CCTACATGACGTGCCGGATTATATCTATAACATGTCCCTAGGATAGAACTATGAACTTAA
AGCGACAAGGAGTTCTTGCAAAGCAAAGCTGTCCTGGTTCGGTTTCCTAACCATACGATG
CAGTTCTCCAGCGGCATTGGTGGCGAAGTGCAAAATAAAAGTGGGAGATGGCGCGGAGCG
ACAACCCGAGACGAACCCAAAACAGATCACCTCTCGGTAGAGGAGTAAAAACCCATTGTC
GTGCAGAGGGTGATGGTAAACCGGCGACTGAGACGGGCGCCGGAGACGGGGGAGATTGCT
CGCTCGCCGGCGGCGACCGGCGAGAGAGGAAATGGGGACGGGAAGGTCGAAGGAAGCGAG
GCCTTAACTGGCTAAAAGTTTGGCCTGCCCGATCAAAAACGACAGGCAGAAAGGCCCATC
ACCACTACCGTCCTCCTGCTGCTACCTAGCCGTGGGTAAAAGCGACGGCGGAGTGTCCAC
GCACACGCACACGCCCGTCGCTGTAGCCTGTAGCCTGTAGCCTGTAGCCGGCTCACGATA
ATTCCATTCGATGCGTAGCGTATTAATGGGAAACGGTTGGGCGCCAAGCACGCGCACGCG
GCCGGCCTGTTTCCTCCTTCCTTCCTTCCTGGATCGACGATCACCACGACCCGCTAGTCT
AGCTAACTGATTATACTGAAGCTACAAATCAATTCACCGAAAAGTAATCAGCTAGTAGTA
GTAGTTGGTTACCTTGTCGAGGAGGAAACATGCCCACGCGACCGCCCTGGCGCAGCCCCG
GTCCTCGCCGCCGGCGAAGCGGCCGCCGGAGCAGAGCCGCTTGAGGAGCCGCGCGGCGTG
GTACCCCGCGGCCACGGCCGCCGCCACGACCAGCACCCTGGTCACACTCACACAGCAAGA
ATTCGATCAGGATCGTCGCGAAACCTGGTAGCACTACATCGATCCGTGGCCGAACATGGG
GCGCGCGTGGGCGCGTAGCATGTACCAGAGGGCCTCGACGTCCTTGGGCACGGCCTTCTT
CCGGATGAAGAACACCGTCTTGGTCTGTGCGCTCAGGCCGAGGAGCAGCGCGGACGCCGC
CGACCCCACCGCGCACGCGCCCCGGAGGAGGCTCTCCGCCCTGCCCGACGCCACCACCGC
CTGCAGCCTCGCCACCGCCCCCATGTCGCCCGGCCGCCTCGCTCGATCGGTCTCCGCCTC
GCTTCCCGGCCGACGTTTTGGGGAGCTCTGTGGAGCCTTCGGACGTGAACGCTCTGGCGG
GGTAGCGCGCGCGGAAAGCGTTGGGGGCCAGAGCGCGTGCTTTATATCACCGATATCCAT
CCATCGGCTCCCATCAATTTTGATGGGGGCTGGCTGCGGTGGTGCAAAGGGGCTCGAAAG
TAGTACGTGAGCGTTGAGGCCGCCATGTTTGTATGGGATTTAAATTTTTCACCAAATTGC
GTTGAATTTCATGGGCTTCACTGTAACTGCACGTATGCTTATGAACCTTTGGGCAGCTTT
ATAAAATGCCATGGCTTTTAGAGGATGACCAGCAATTTGTGTGCTTGATTATCGTATGCT
AGTGTCTATGTCATCAACCAATAATACACCACACAATGGCTCTAATCACGTGTATCTTAA
GTTGGGCAATATGGGGTTCTCAATATGGCTCTAATCACGTGTATCTTAAGCAGCGGCTCA
ACCGGGTGTTCCTGGACAGCGTCATGAGACGGCGTGAGTTACTGGCCGTTACGCCAGGTC
GTCAAAAAACGGGCCCCCTTGTCATAATAGAGGTTAAAAGGGGCGAAGAGGCGATTAGGT
GTTTTTTGCAAATGATTAGGATAAAAATTAGTGATATCTGCAAAGATTTCGTAAAAAAGT
GTTTTCTGCAGAACCACGCTTCAATGTAATGGTTTTTCACAATTCACTCCCTCTCAGTGA
ACGCATGTTGCTAGAATGCTTGGAATAAATTCAGGTAAACGGCAACAAGAATGTTAAATA
TGAAACTTAAACTCTTGTGGACAAGGGATACCACTGTCCTTCTAACCATTCAATCATAGG
TTGGTTTGCATACTTGACTTGTTAGCATACAAATAAACCCTCCTTACGTTTTGCAAAAAC
AAAAACAAAAAAAAACTCACCCTACTCTATTCTCTGTCACGTCATGATGCATTCTTCATG
GTAAATTTTACAATTGATGCCGCCAACAGTATGGAATTGTCCTGTTCCTCTTCTGTATTG
TGCACTCACATATCTAGAGACATGATCTGGTCACGATTAGCAGAGTTTAAGACAATGAGC
TGAAGAAAGACAAACGAAAAACTCAAAGCTGCAACTAAAAAATCATTCAAAGCGATGAGC
ATGAGAAAATAATCTCAAAACTAACAAGGTAGGCCAAACTGATGTGATTTTAGAATTAAC
CAGATTAGTTGAATGAAGTGAAGAGCAATCCACAATCCTTTTTTGTACAGGAAATTTGCA
ACATAAATGGGAATTCACCCATTAGGAAATGTGTGAATATGCGTGGCATCCTCACGTTTT
ACCTCCCTAAGGCCCTGCTTGGGATGTCGTTCTAAACACTATTATATTCTTTACGAAGGG
AGTATACGCTGCATTGACAGAGATTGTGAACATGGTGTGAAAGGGGGTGTAGCCATCTGC
GTTTGCTTACAGTTACGGGTAGCCTTCGCAGCTTTGGGCGTCAACGAGACTGCATCAAGC
GTCAACCACCTCGAATACGATACACAGCAACTTGAAACATCAACTACGATTAAAATCTTA
TAAAAAAAAAAAGACGCTGCATCTACTACAAATCTTAGGGAGAAAAGATATCGGACTGAG
GATGATTAGGAGAAAAAAATCAAAGGGGAGAGGGGCTAATTAGGTTAGGTGTGGACACGT
ACCTCCGTATCTTCCGTCCGTAAGCTGGCATTCGAGAAAATTAGTGACTATTGAAAAGGA
AAAAAAAATGTGTGGTTCAGTTTGCCCTCCATTTGACTGGAAGACCTCCACGTCCCATCA
GCTCAACTTCTTATAAATGACATGCCCGGCTGCAACAAATGGTCACTGTATGATCACTTG
ATAAAAGAGGCCAAGAACATAATGCCGATGCACCACTTCAACAAAATTACTGAGCCTTAC
AAACATGTTCTTCCAGTAGTTATGGACCCCCAACCAAGTAACAGCCACAAAAACGTAATA
CTGTTCAAATCAATTCACATCGTCTTCTACAGCAATATTCTGCACAAATTAAGCTAAACG
GAAAAGGCACTAAACAAGAATTTATGTTGAAATTATACAAGGAAGCGGGTCGGCATTTTT
TTACAAGATAGCAGAGCTGCTCGCTGTAGATTTACAGAAAACTAGCTTCAATGGCAATCA
CGACGAATATGTGAGCCAAAGAACTAGTTCGCAGCAACAGCAGCTGGTATTTGAGATTTC
AACTAACAGTGAGCACACGCCAAGATCTTAATCATCCAGCTCAACAATCTGTGCCCTTCT
CTCCGCAGCTTTCTTCCTGACAAATATTCCCCACCTCATAGCGGCCTTTATCTTGAGCCA
CCCAACAACGGCTTTGCCCGATGGACGGCTGGGCTCACCTTCGAAGCCTGGGGTTGGCAA
TGGAGATGGCATGTAGGTCTGGTAGGAAAACGTCTCGTCTGGCAAACCAGGAGAAGCTCC
ACCCATATTGAAGACCCTGAGCAGCTGCTGCATGTCTTCACCCTCGAGCAGTTGGTGGCT
TTTCATGCGAATGTCTTCGGTGAAATCATCAGCATACTGACTATCACGGTTGTGATGCCA
ATTATCGTAGCTGACATTTGCTGGTTGAATTGGATGGGCTTGAGAAATTGTGTGATGCAA
TTGGCTGAGTTCCAGACCCATGGCATCACTTGCTGTTCCTTGATTAGAACCCATCAACAT
GGTAGGCGGCAAAAATGAAAAGGCCTCATCATATGGCAACGGCACATTAGCAGATGAACT
CTGAAGCTGAACAGACTGTGTTGCTGTCTGGTTGCCATCATACCCTATAGAACCATTTGA
GCCTGCAATAGATGAAACAAAACATATGGTTTTCAGAAACTGCTATTCCACAGTGACATC
ATAAAATATTTCATACACCATTTGCTTAATTTGTACTCCCTCCGACCAATAATATAAGAC
CTTATTACATCCAATATCCTCGCATATAAGATGTAATAAGATCTTATATTATGGAATGGA
GGGAGTATATATTTAGGCTGCTCATAGTGGGAAGTATCATATACTAATATCATGCATATT
ATACTAGTGTATGATGGTACCTTTATAATGCATAGTATCAGAGTAATATCATATATGATC
TTATTTATTGTCATGCATGACACAAAGTAGCATAGCATTTAACATGATACGGTATCAACC
TATGTTACTCTACCCATCTCTCTCTTCTTTAATTCTCTGACACATCAGCACGTTTGCTAT
TCCCGAGTGCATGATATCGGCTAAGATACCACCACTATGGCCAGCCTTAAATACAAAATC
AATGTTTCAGTTTTTCCAACGCATTAAGTCGTATTTTCCTACTTCTGAAGTAAAATCGTA
AAAATACTTGGAATTCTGTAACTA