| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_44056
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59946 |
2 |
1652 bp |
AK249827.1 |
Not available |
Available |
None |
CDS Structure of MLOC_59946
Contig Sequence (8088 bp)
>contig_44056 8088 assembly3_WGSMorex_rbca.fasta
CGACAAGAGGGAGCGCGGCGGGTGCGTGCGCTGCGCGCGCCGGCTGGTGCGCCGCGGCGG
CTGCGGACGGGATTGGGGCGGAGCCTCCTCCGGCGCCGATGCCGGGGCAGAGGTCGCTGT
CGACGCCGTTCCTGGACCCGGCGATGGACGACATGATCTCGTGGGGCGAGGACGGGTCGA
CGTTCGTGATGTGGCGGCCGGCGGAGCTCACCCGGGACCTGCTCCCCAAGTACTTCAAGC
ACAACTACTTCTCTAGCTTCGTGTGACAGCTCAACACCTGCATAGGTGAGCTCGATGGGT
TTCGTTGGTTGATTCCTCGGGCTCAGGTTTGGATTTGGCCTCTCTAGATTTTTGGCGTGG
AATGCCCATGTTGGTGATGCACTGATGTTTGGATTTTGCTTGATGTGACGTGTAGAGATT
TAGGAGTTCGCCAACGACTGCTTCCGACAAGGCGAGAAGCGCCTGCTCTACGACATACAC
CGCCGGAAGATGGTCCAGTGTGCCAGGCTGGCGGCTGGGGCCGTGACGGTTGTTGTTGCG
GCGGATTCCGATGGCGCTGCCGGTGACGCGCTTTGGCTCTCCGGAGCCGTAACTCTCCTC
CGAGGAACGGGTTCTGTCATCCAACTTTGGATCCGTGGAGGAGCTCCCGCTGGCGCCGTC
TGGCTCAGGAGGCTCCGGCTTGGTAGGTACCGCCGCCGGCTCATCGATCAGGCACAGCGT
CTCTCGGAGACTACAAATCAATGTTCACGCGAACTGTAACTCGAGTGTGGTTGTGGCCTT
GTGGCCATCACGTGTGTCCTTGCGCGACAGGTCGTAGGTTCGATTCCTGCTACTGCGTGA
TTTTGGGTTCTTTTATTTATTTGTTTAATTCGATGGAAATTTTTAAAAAGTCCGATAGTG
GAAAACTTGCGAACAAAAAAAATCTCACAGAAACTATTTTTCCGCAAAAAATGGGCATTT
ATGTGATTATGTATAAAGCAACGGGCTTTTCTAGAAAAAAACATGCCACGTGGGCACCTG
ACAGGTGGGTCCCGTCGGTCAGATACACCTTCAATACGTATTTATACATGGTTTAGATCT
TTTGTAACGACTTGCCCCGAACTTGGTACTCACATGTAAAAATTACCAATCTTGGTATCA
GTTTGTATGTAGTCCATATTGAAATATCCAAAACATGGAGATAAACAACAGTTAATCAAG
ATTACCTTAAGCCACTCAAAGAGATTGTGTTCCACATCCGCAACTGAGACACCATCCTTC
TCAACAGGCAATTCAGAAGCCATTACATCAACAATTGAAGCAAGTCCATCCTCTCTGCTC
CAGACAACCGCACCTTGTTGAATTAACAGGAGGGAATGATCTTCCATTACAACCAGAGCC
CGAAAACCATGAGATTTATCAGTGCGGACATAATTATTCAAGAAGACCTTCTCTACACTG
CCTCTATGCTGATCTATATCAACTTTCTCCCTAATAATTTCATTGGTTAAATCACTTGTA
ACTTTGACAATAAATTCAATTTGAGAACCCACATGTTGCACAATAGCAAAAGCTTCATCT
TTTTCTGTTATTGTCAGAGCATCACTTACAGAGGCTGGTCGATCAAAGCTATGGATTACT
TCCAACCCATTCATACCTTTAAGCTTCAGGAGAGAAACAGTAGAAGATGATTGCAAAGCT
ATGATACCATTAGACATCAACGGTAGAAGTTTGACCATCCCAGAAAAGTCTTGAACAAAC
TCTGAAATCTGCACCTTGTTGTAGCTGATGCTCTCACCCTTGAACTCAACAATAAACAGA
GCTGACCTGGTCTCATCCAGTGCTACCAACACATTACTGGAACCAAGTAACATTTCACCA
CATAATCCATCAGGCAGTGACTCTTGGGCATCCTTTACTATCTCTCCAGTTTTAGCATTC
AACTGATAAACAGCAAGCTTCGAGGAACCAGCAATCCCAACAACATAGACAATATCATTC
TCAGGTGATTGAACAACCTGCTTGATTTCTAGGCTGCACAGATATTGAAGTGCAAGTTAG
TACTGTATTCCTGATGTTCTGAACAAGTAACTAAGGGGCATAGTTATGCGTACCCGTCAA
GTGTGAACTCCTTTCCCCAAGAAATGAGTCCATCAATGCTTGATATAGCATAAATCCATT
GTCCAGCCAAAACTAAAACCAAATTATCTTGTACCACTTTACTGTTTGACTGCACATACA
AAAAGGAGATTGATCATTCTGAATAGGTGATACAAAGAAAAACATATCTTATTATCAACA
TATTACGACAAATTGCTAATACAAACCAAAACATGCAGCAACGACTTTGATGCTGAGGAA
GTTTGAATATTGGTTTCCCAGACCATCTGTCCATCAGGAAGATTCCATGCCCTCAATATA
CTACCTCCCGAAGAAAGGGTAACAACATCTGAAGACATGTTAAAAAACAGATGGTTCAAA
AAAGATTCAAAAATCATATTGCAACACAAACAATTTGGACAGTAATTTCTTTGATGACTG
ATAGTTAAGTGACAAAATCACATGCAATCACACTTCATGACATAAGTATTGTTTATACCA
CCAGTAAGGCAAAAGGCCAACACAATTTGGCTTTTCAAAAGAAAAAATACTGAGCTCATC
ATGTTCGCTGAAACGCGTCTCTTGCCTATTAGGTTGAGTACAACAACAATAACAACAACA
AAAACCTTTCAGTCCCAAACAAATTGGGGTAGGCTAGAGTTGAAACTCATAAGATATCAA
AACCAAGTCATGGTTCTGGCACGTGGATAGCTAATTTCCACGCACCCCTGCACATGGCTA
CATCTTTGGTGATATTCGAGTCCCTCAGATCTCTCTTTACAAACTCCTCCCATGACAAGT
TTGGTCTACCCCGACCTCTCTTGACATTATCAGCACACCTTAAGCATCCACCATGCACTG
ACGCTTCTGGAGGCCTGTGTTGAATATGCCCAAACCATCTCAGACGATGTTAGACAAGCT
TCTCTTCAATCAGTGCCACCTATCACGTATATCATCATTCCAGACACAATCCTTTCTTGT
GTGGCTATATATCCATCTCAACATGCGCATCTCTGCTACACATAGTTGTTGGACATGCCG
CCTTTTAGTTGGCCAACATTCAGCGCCATACAACATCGCAGGTCGAATTGCCGTCCTATA
GAACCTACCTTTTAGCTTTGGTGGCACTCTACTCACAGAGAAAGCTAGAAGCTTGGTGCC
ACTTCATCCATCCAGCATTGATTCGATGGTTCACATCTTCATCGATATCACCACCCTTCT
GCAGCATTGACCCCAAATATGAAAACGTGTCCTTCTGAGGTACCACCTGCCTATCAAGGC
TAACTTCCTCCTCCTCCTCATGCCCAGCAGTACTAAACCCACACCTCATGTACTCAGTTT
TAGTTCTACTAAGCCTAAAACCTTTCGATTCTAAAGTCTGTCTCCACAACTCTAACATTC
TATTAACCCCCGTCCGACTATCGTCGGCTAGCACCACATCCTCCGCAAAGAGCATACACC
ATGGGATATCTCCTTGTATATTTGTGACCTCATCCATCACCAAAGCAAAAAAAAGATAAG
GGCTCAAAGCTGAGCCTTGGTGCAGTCCTATTTGAAATGGAAAGTCCTCAGTGTCGACAT
CCCTTGTTCGAACACTTGTCAAAACATTATCGCACATGTCCTTGATAAGGGTAAATGTAC
TTTGTTGGGACTTTGTGTTTCTCCAAGGCCCACCACATGACATTCCGCGGTGAGTCAAAA
AACTTTGTTCTTTGTTCGTCCTATCTATAAGAGGAAAGCATATGAAAGATGTAACCCATC
CTCTCGTTTTTTTAGCTCACTGGCCATCCGCTGGCAGTTTCGGGCTTAATACCGATATTT
TAGCAACAAATCTAATAAATNTAACTGTAGTGGTTGTTGTTTTGATTGATTTTTTTTGGA
AAGGGTGTGTGTGTGAGTTGTCTATTTCAAGAATAGATTGGATCTATCCGGCTGCACTTT
ATAATATTTTTTAGTATTTTTCGGATAAATAAGAAAAGGGTGCACGATCACGGCGAGTTA
CTTCTGAATAAATTCAGAAATCTTGGCATTCTCAAGCACTACCTCCGGGTTTTTTTTCAG
TCCATATATAACAGTCAATCTACCAGCAGCAGAGGCTGCAGATACATGTCCACCACCTGT
TTATATACTACCATATGAAGGAGAAGTTGCAGGTAAAGAGTGTCGTGAGGGCTTTCATTT
GCACTTTAAGGGCCGTTTCTGTTATAGCACTAGAAATATGTGTCGTTAGTCTCAGCTAGA
ACAGAGGTTTAGCATCGACTAAATTCCGTATTACGTACGTTAGGAAGGCGGTCTGAACTT
TTATCATATCCTTGAACCAAAGAGAGCAACGCAAACAGTTCAGGAGGTCACAAATCAAAC
CCTTAGTTCAGTGCAGGATCTCGTAAGTACTATGGGTCAATCATATCATTTTCTAGACGG
AACCATGACAAATTGCTGAGTAGCTCTGAGTGAACTTTTTAATCTGCATAGCTTGGGCTT
AAACACTTTTGTAAATATTTGAACAACAAATAGATGTAAACATTCTACTGTTGTCTTCTC
CACGCCAACAAAAAATGTGTTGACCTAGAACCTCTGACATGCAGCTATCATGCTGCTCAC
CTTTAGTTATTGTAGTATTAATAATCGTGGATGCCTGAGTGATATTCTGTATAGATCTAC
CTTCTAATTTGTAAGTGGACCTATATGCATCCCCTATTGGCTAATTGGTACCTCGAGTAT
ACGCATTGATTCATATTCTTACTCGTACATAAGTATATATTGGGATTATATGAATAACAC
ATAAGGATACCAAAGTCAAATAGGCATCGGAAACAGAGATGATAAAGAAAGCTATTCTGC
ACATGCAAATAAAGGTTTGGAGTATAGATAGAAAAGAAACACACATATAACTTTTAGAAG
AATAAAACTGGTCTCAGAGGATATATTTCCTATCAACAACGAATAAAATGCATAAAAATA
AACAGCATCAACAATGTTGTTCTTCTAAGAGAAGGTGTCATAGATGAAAGCAAAAATCTA
TACTCACATTTTCCAGCTGATAGACTAAGCTGATCAATGGGGTTATTCTTCTCAATGACA
TGTCGCCAAACTGCATCAAAATCGACATATGTTAAAGACACATAGTTGTAGCACATCAAT
GGCAGGCCACCTTAAGAAACCAAGTGACAAGAAGAACTGACATATATCTCCTGAACGAAG
ATCAAGAGAAGCGATCACATTTTCCTCTGTCAAGACCACAACACGCCTCCTCCCACTCTT
CTGAGTGTGGTAAACTGCCTGCTTAACTTTGCCTATGTATTTCTGATGCCTGCAAAGAAC
ATCAGTTTTTCAAATGGTGAAATAGGGTTAGTCACAGAGACTCCATCGTGCTAATTAGAA
ATAGAAGCAGTGTTAAGAGGTCCAATGTGAAATTCACAGCGGTTTACCAAAATTTTGAAA
TAAAACCAACACAGAGCTGATGGTACATATGCTCTTAAAAATAATCATCTACTAGATTAG
TACACTGCATGTTCATAAAAAGCCGTGTATCTACAATGAAATTGTAAGCTGAGGTGTGTC
TGACACTTCTATGTCCGCAAAAGCAACAACAAAACCTTGGAAAGTTTCAACTGATCGTCT
ACTTAAGTTCGAGAGAACCAAGAAGTTCCATAACGCAATCTCATCTGATCTGCAGCGCAG
CCAACACCAGAGGCTGAAACAGACGACATGATATTCACATGCGTAGTAGTCAATTGGTAG
CTAGAATAAGTAGCTCTAGATATAACAAAGAAGAAATCACTCAAAAGCTAACAGGCACAT
CACACGTCGCCAAAAGCCTCGAAAACCCTACATTGCCATGGCGTGTAACTACTCCATAAC
AGTGAAACAGCGATCTGAACTATAAACTAAGTCCGCTGCGTCGTGTTAGGAGAGTCAGAT
CTAGACGCGGTAGGAGCGGATCGCATCTATGCTACAGGAGGGACGCGGGGTAAAATACCA
GTCAGCGAGGCCGACTTGATCTGCGTAGACAGCGGCGGCGAGGGTAGCTAGAGAGACAGC
GACAAGGAACCCGAGGAGGACGAGGAGGAGTTGGCGCGGCGGCAGCGCCATCGCCGACGG
GGTTTGGATTCGACCTCTGATCTGAGAGGAGGGAGGAGGGGGGGGCGTCTGGGTAGCGTC
GTTTACTGCACGGGCTCGGGGATTGGAGTCATAGCGGATTTGTGGGCGAGGTACGACGAA
CTTTTCTAAAAACTAACCGTGCCTTGTTACGGGATAACAAAATGCATGTATCAAAAAAAA
AGTAACGTCACATCAGAAATAGACTATTCACATATGATATCTCATGGTCCTAAAATTGTA
CATAAATATATGTCATCGTCATCTTCTCCCCTCCCTCTTCTCGAGAGGAAACCTCCTTCC
ACGATCCTTTATCTTCCGTATTATCTTTCTCATACTTTGTCTTACACAATCTCTACTACT
AAGTGTCTTGTCCAATCCGTGTGTCTCGTGAGAGATTAAGATTTACTATGATATCTAATT
TGATTGTATAGTATCAGATTTTAAGAAAAAAAATTGTAGCTTCTATACAAATCGTCACAC
GGGCACATTCTACACACTAAAATATGATGGTGCTTCAGTTATACAGTACAATATTCAAAA
TGCAGCTTTAGTCACCAAACCGTGTGAGTGAACGGGCTTTCAGAATAATTACTTGTATCA
TGTTGTAGGTACTATCAAGAATAAGAAGAAACATTATATCTGAATCCGTAAGACAATATA
CTTTCAATCTCTACCGAACCATGTAACAGTGCCCTTGTCTCATTCTGATGGAATGATTCA
ATGGTCAATGTTATATAGTTCATCAGAAACTTCAAAAAAAGAATATGCTCGATATAACTA
AAGATTTTCTTTTTGACTTATGAGGCAACCAACCAACATTAGCATTTGCCTTCCAAAGTG
CATGTATACGATGGAACAGGTGAACAATATGAAAGAAATATGTACTCCAGTATTTAGGGG
AGAATTTATACACATAAGAATATAGGAATGATTGATTGCAAGAGAGGAGGAAACATCAAA
AGCACCATAGTAATTAATTCCACTCACAAACTTTTCCTCACGGAATTTCACAACTTCATA
AGACATCATTAAAAATCGGTCGTCGGTAAATAGATTGGTCAATCCAGACATCGTATGAGC
ACATATTTAACATTCCAAACCACCTGGATCCATATTCTATATAGAAGAATCAAGTAGAGA
TGGAAGTATAATGTATACACATAAATCGTTGAATCCTGTAACACAATTTGAAAGGTAATC
AGCCACATTTTGACACCATTCTCTCAGCTCTTAAATACGTCATAATTTTTTCCTATACAG
TTTGCAAGATACAGATTAAACCATAAACTGTAGTAAGAACATAATCATACTATCATAGAT
AAATTTGTAGAATTCTTCTATCAATATTCCTATGAATTACCAACTAATTTAATGTGTTTA
ATACTATGAAGAATAGCTACCTGAATTCCAATGAGGCCTATATATATATAGTTATATACA
CATGCAGGTCTCCAATAATTTACCAGAAAAGGAGCAAAAATAACTTACGAAGTGGTGCGC
TGTTCTAGCTCGCTCGTGTGCTATGTGTCTCGACCACACTAGCGCTTAGTTCCTGCAGAA
GCACCAAAGACCAGGAGGAGGAGAGGCTACCAAGCATGGCCTACAGCCAAATAAATATCA
TTTATTTATGGAGAAGAGGATATTATATATAATTGTCTATGAGGCAGTTCAGTTTATTGG
ACGGAAAAAGATACCCTGGGCAGTATGTTGTATGGAGAACACATCCCAATCCCTGATGAG
AAGACATTGTTTGAGTGATATCCTATATCATCAACAAATCACTTTCAAGATCAGAAAAAG
TATATGATTGTGAGAGTGCACATTGAGAGAAAAAACGTGTACAACCTAGTAAAAATAATG
ATCTATTTAAACGGACCGAGAAAGAAGCATCCAAGACTCTCGAGATCT
