morexGenes - Barley RNA-seq Database

Contig contig_44025
Source Contig contig_44025
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44025 (10328 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_44025

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_59910	5	4777 bp	MLOC_59910.5	Available	Available	LOC_Os07g44730.1, FRAME:+3, EVALUE:3e-137, 13107.m04708 protein expressed protein
MLOC_59909	1	1442 bp	None	Available	Available	LOC_Os07g44740.1, FRAME:+2, EVALUE:2e-42, 13107.m04709 protein chaperonin, putative, expressed
CDS Structure of MLOC_59910

CDS Structure of MLOC_59909

Contig Sequence (10328 bp)

>contig_44025 10328 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGAGGGGCACGCAGAGGCCACTAATTGGTTCGGTCCTGATGGTGTGCCCGA
GACCATGTAGGATTGTCGCGTGTCAGGTGCAGGATTGCTGATGGGGCGCCTGATGGGCGG
CGCAGAATCCATCGTGTTGTCGTCCTACTGTTGTGCAGATCTCGAGGCGGATCGCTTCTC
GAGTGTCGAACTCGAGGAGGAATTGCGCCCCAAACCCGGGCACATAAAATGTGACCTATT
TGGAGCATTTTCATCATCAGTTTGGCTGTTTTCTGCATCCTTTTCTTCATAGTTTTCACC
TGCAGCATCACAAGGCTCATGTGCATGGTTATGAGAATTAGTCACTGTTAGGTCACTGCA
ATTATTTCCCCCTTGATCAAGATCAGTAAGGCTAGGTGGTAACAGAAGAATCTCTTTGGA
AAGAAAAGAACCGGCGTTAGGATGAAGATCGGAAAAAGGAATTTTGATCTCATAGAAAAC
AACATCACGAGAGATGTAGACACGACCAATATGAATATCTAGGCACTTGACACCTTTATG
TTGAGCACTATAACCAAGGAACACATATTTTCTCAATCTAAACATGATTTACGATTGTTG
TAGGGGCGAAGGTTTGGCCAGCAAGCACAACCAAAGACACACATAGATGTTTAGTCAGGT
TTTGTGTGAAGAAGTCTTTCAATGGGAGTTTCATTATTGATGTCACGACTAGGTAGCATA
TTGATGATGTGGACAACAGTGAGAAAAGCCTCGTCACAAAATTTTAGAGGCATGGAGGCG
CCCGCTAAAAGTGCTAGGCCAACCTGTATGATGTGTCTATGTTTGCGTTCAGCTGAGCCA
TTTTGTTGGTGAGCGTGTGGACAAGACACATGGTGAGAGAAACCAAGTTTCTGAAAGATA
GAATTCTACTTTTCATATTCCCCTGCCCAAATAGATTGGAGAGCGAGAATTTTGCTATCA
AATTGTCATTCAACAAGAGCTTGGGAGTTCAGAAAAACTTGGAAAACATTGGATCGCTTC
TTAAGAAGATAGATCAAAGAAAAATATTTGTAGTCATCAATGAAACTCGCATAATATGTA
TGTCTACCAACAGAGGAGGGGGTAGGCCCCCAAACATCAGAAAAGATGAGTTGCAAAGGT
TTGGTAGAAATACTTGTAGAAATTGGATAAGGCAACTGATGGCTCTTAGACTTTTGACAT
GAATCGCAAATTGTTTCGACATCACGATCTCCATTATAAGGGAGTTTATTTTTTCCTAAG
CAATCGCTCAACTAAATAAAAAGATGCATGGCCTAGACGATCATGTCACCGTGTTGAAGA
CACTTTGGTGGCACTACTTGCTTATTCAATCTTCTAATATCCGAAATCAACGGGTAAAGC
CCACAAACTCATCTACCTCGAGATAACACCTTCTTCGTTGCCTGATCCTTGATCAAAAAG
AAGAACACGTGAAATTCAAGAAATACATGATTGTTAATAGCAATACGGTGAACGAAAAGA
AGATTCTTTGAAGCACTGGGCACATGCAAAAAAAATTATGAGATGGATTTTTCTATGGTT
TTTTTAATAACTAAGTGACCAACGTGACTGATTTTCATTCCTTCTCCATTTGCGGTGTGG
ATGTGATCGTTGTCACGATACTTCTCACGTATGGTCACCTTTTCCAGCTTCCCGGTGATG
TGATTTGTGGTGCCGTTGTCGACGTCCCCGGCCACCTTCTCATCTTGAGATGACTCACCA
TCATCATCCTCAAAACGGTACCAACAATCTTTCGCCGAGTGTTCCCGCATCCCACAGATT
TGCCACCTGATCGAGTCATGGCGCGATCTGTTGTTGGAGTTACTGTTGTGTCGGCCCCTA
GTGTTGTTGGAGGGAGGCCGATCGTCACATGAGTTGTTGGAGCCGCTGCTGGCGCCCTTG
CCCTTGTTGTCTCGAGGCGGACCGCCGTAGCGAGAGCCCCCGCCTCTGTCGCGAGTGGCG
GCGTTTTCTGAAGATTTGAAGCCGCCTCATGCGCCTTGCAAGAGAGCCACCGGTTGACCA
AAGTTGCTCATTTGAGAGAACAACTCGTCGAGGGTGATCGGAGTAGTCCGTGCGTCGAGG
GCGGAAACCAACGACTGGTACTCCATGTCAAGTCCGTTGAGGATGCAGTACACCAGTTCA
TCATCCGGCAACGACTTGCCAGCCGATGCGAGCTCGTCGGTGAGGCCACGCATATGTGCG
AAGAAGGAAGCCACATATTGTGTCCCCTTTTGCGCATTGGTGAGAGTTGCGCACATGTTG
CTGACACGGGACAACGAGATCGACGAGAACATGGTCGCCAATGCCGTCCAGAGCTCGTGT
GCATGAGCGATGGAAGTCACCCGCACGAGGACTTCTTCTAAGAGATTATTCAAGAGATAA
CCGAGTATCCGATGATCCTCTCTAACCCAGATGGAATGAAGCGAATTTGGGATGCTTTCC
TCCTTTTCATCCTTGTCCTTGCTGACGACGATCTTGGTTGGCTTCACCATGCTTTCATCA
ACATAGCTGAAGAAGCCCGCCTCCTCAGCTGCGGCGTAATCTGAGTACACCACGTGATGT
GGTTGGTGTGGGTGAGGCGCTTAGTGATCTGTCCGGTGAGGGTAGAGGAGAGCGAGCTGA
AGGAGGCCATGGCAGGGAGGTGCGGTGAAGGAGGAGAATTACAAGATGGAAGACTCTACG
GCGTACAAGTTGTTTGGATTACAAATTTGAAGAGAAAGAGATAGACTAGAGAGATAAGAT
TACAACAACTCAAACTAACTAGCTATCTCGGTTTGGAGTTTCCTTGGGATACACGAGAGC
AGCAGAACCTTCTCACGTAACGATCAAGTGCGATGTGATAGGTTCACAATATCTCGTTTA
ACACCCCTAAGTTATGACGCTAAACAAGACGGGCATCCAAACGGATCTTTAATCGTGTTG
GTTGCAACTTAGTGGTTGGAGTGGTTTCAGACTCCATCCACGGCACCACGCCACTACTCT
CTTCTTTCTTTCCATCCGCCGCGCGGGACCATTTCCAACCTCCAATCGCCAGCTCCTCCT
CACCAGTAACAAACCATTAAGAACAGCACCACAACGAATTGCTCATGCGCTCCCTGTACA
CTGCTACTGATAGCAAGCAAGTCGCCTACCATCTGGCAGCCTTTAGAACTTAGTGATATA
AGTTAGGTTCCAAAAATAAAATAAAATCAGAGAAGTGAAAGTAAGATTCTTCATCGTCAA
GTCAATGGTCTTCACACAGACACACTGCACCTGTGCGTGGCTGCACCTCCCCGTAATCGA
GATCGAAAACAACCAACGTTTTCCACTGTACCAGAAGCACTCCGGCTCGTCCCGGTTTCG
GATGATAGCGGGGAGGCCGCTGGTCCAGGCGCAACGCATCGGCGTTCAGCAACAGGATCC
GGCACAGCTTCGTGACCTCCTCTGCGCCAGCGACGGGGCTCCAAAATCCCGGGCTGCTTC
CGAATGCCAGACGAAGTAAAGAAGAAAGGCAAAGCCGCCGACGACGCCTCCGTGTCCGTG
ACCAGGCCCGCTCTGCTGGCTACGGCAGGCAGGCCTTGACGAGTTGTCGCGACGAGATTC
GCGGCACGGCGAGGGAAGCAGGCAGGCTAGAGAACAGCCCAGGGGTTTTGGATCCACGTC
GCATGCATCGCATCACCGGCAACTTGGCATGGCAGCGTTGCGGGACAATGTATGGCAGGG
ATGATGAAGATTCATTGATTCATTCAGTGTGGGTCATGGTGTCTACCCAGGCGACGCCAA
GCACGAGCCCATGGCGACCCAGAGCATTTTTTTCAGACCCTGTCAGCAGCAGCCTCTCAA
GTATATATATGATGCCGCCTGCTTCTTCTGGCACCTCTTCCTCCATAGATTCCTCTCGAT
CAAGGACTATCATTCATCAGAGTGCCTGGTGGTCATCTCATTGCTACTCTGATGATAGAC
GGTCTAGATTAAAAAAAAAAGAGCTGTAACAACGACGCGACTCGATGCTATGCTCGTGCC
CAGAATCGCTTCTTGATTTGGCGAAAAAGGGCCACGACCGACCGTCGAATAATTTGAAAG
TTGCGCTGAATCAATCAATCAGCGCAGTATCAGGACTGATGCTAATGTTGTTGTAGTACT
GTTTTCTCCCATGGAGTGGAGGGATGCAGACTAGAGACCGCATCATGTTCAGGCCCAGCT
CGGCAGGTCATGCCGGCGGTAACATTGGCTTTCCTGATAGGAGGAGGCTCCACACACATG
CCTGATGGAATTGTCACCCAACCATTACATCGGAGGCGTCATTTGAGGGTGATGTCGAAT
ATGACGCCTTCGAGATCTGTGATGCTTGTTCTTGTCCCGTCCACTTCCTTGACAAGCATT
CCGCGTTTTTCAGCTTCCTTCAGTACCAGTGCATCCATGCTGACCATATCGAGAAGAGAA
GCGTCTTGGTTAAGAGAATATACACATCATCATTTAAAAAATACGTATGCATTAATACTG
GAATCGGTGTAAAAGAATATGACAAACAAAGAAAGTTAGTTGGAGAACAAAATAGGAGAT
AAAATCTGAAGCAGACATAAGTGGCCTACTAAAGTGCTGGAGCTGCTCTCAGATCACACT
TGTATGAGTTATGACAACCTCGCAAAAATCTTTACAAAAGTACGAAAGGCAACACTAAGA
TAACCGGACATAATATCCCAGGAAAAGATAGGTCATTTATTGTTGATATTTGTACTTGTA
ATGCAAGCTTTAGTAAAAGGACATTCTGGCCATTTATTGGAGTACATGTCAGTATGCTAC
AAGTTGTAGCTGTCAGTAAATGATAATCTAAACTACTCCGAGCCAGCCTGTACATTGTAA
TATGCTCAGGAATGCATTTGGAGAATCATTGCTGCACAAAGAAAACGAACTAGCAGGTGC
AGTGTATCTCCAGCAAGCAACAAACTGATAAAAGAGTGGGCAACATGACACTCTGCTTGT
CTGTAAATCGGCAGAGGTACTGTAGCTCTACATAGATACATGTCACTCCGAATTTGGAAT
TTTCAGCAAATCTTTTATCTTTACGTACAAGTGAATCACAGCGTGTGCAATTTTGACTCA
AGGGATCAATGCTCATTAGCATATGCAATGTGTTGGTTCTTTGGAGCCATTGTAAGTACT
TCTTAGGACTTTCTAATCTGACTATAATGTCAGTATTCCTTAGTGCAATCAGCACATCGT
GATGAACGGCATTTATCTGCACCTTTTTTCTAGAAAGCATTTAAAACACTACACATATAT
TGGACGGGAAGATAATGAGTTAAAAAATACATACACTTTGGCTCGTGATACATAAGCCAG
TATAAATCTACATTTATTGGCCTGCATACGAAGAAGCTTCTCTACAGTATCAAAGAGACA
TGGAATGCTAGATTGCTGGAAGCTTTCTGCGAGTCAAGGTCCACAAAAAGCAGCAATTGA
TATATGCATAAGGAATAGAGAAAAAAGAGGGTCAGAACTGAATATAACGACAAGGACATA
AAAATGTTAGAAGGATATAGATATCAGCTCCAAGAATGAGATCAAATCCAGCAGGATGTT
TTTCAATGATATTGCTTAGATGATCATGATTTCCCCATTCTAGCTTCTCAGCAGTCAACA
CTGCAACAAAAGTATCAGTTCAGATCCAATTTCTGGATAGTTTTATTTTAGCTAATGTCA
GAGCAATGAAACATAGCAATAAGCTGCAGATTACAAAGTGGTAACCTGCATCCGCATTGC
CAGCACATGACTGCGTCTCTATATTTTTCTTTATAATCTGTGAAATAGATGTAAAGACTT
ATGTCCAAGGAAAGATCCAAGTGTGGCATGTGCAAATGCATGCATCATTCATGATCAATA
AAGTTGTTTCTACTTCTAGCATTTGAAGATATAGTAGTATATTGGATAATTGTTGCCGGA
CAGACTGAAAATATTAATGCAGTGCAATTACTGCATCATTTATGATTGATGAATTTGATT
TCTAGGTCTAGCATTTGAAGATATAGCATTACACTGGATGATTCCTGCCATATAGACTGA
AAAAAGTTGATGTCTATAAACCCAATGTATATCACATACACAAATTGCTATAGTAAGTAA
TTCAATATCTTAAAATCATGTGAAATTCTCAAAATCATTCTATAAAATATAAAACTGGAA
GATTCTGAAGGTTTAAATCTTGCCTCTAGAACTTCATCATTGTGATCAGTCAATACCACC
TCTTTGCAGAAACGGCTGCACAATATGCCGGTAATGCCTAGCAAGTCACAGCAGTGTCAG
TGTTTGTAAGATCACAATTTGAAGTGAATGTGATAGAAAATTCTCTCACCGATCCCAGAT
CCTAACTCAATTAATGAACGCCCCTTCACAGTCTCAGGGTGTTCAGATAGGTACGTGTTC
ATCAGAACAGCACCTGGCCATACTAACTGTCCAGTAAGATCATAATCAGCTGCACCAAAC
ATTGGAATGTTTGTTAGTGGCGGCAGCATGCTAAGAAAATAACAAACATCTGGCACTCTG
TAATATGGGGTGGCATCATGCCTGTACCTAAATCAGCCAGACAAGCTAGTATACTAACCA
TGAGACTTAAATAAGACCATCTCCATATCCCACTGCACGGATGCAACAGAACTAGAGTGT
AGCATGGTCAGATCTATTTTTTTCCAACTAATGGGCACTGGATAGCGCTGTGACCACTTT
AAGTGAGAATTCCTTTGCAAGAAAATTTGCGTACATGCCTCTGGCTGTAGAAGTAGATAC
GAAGGACAGAATGAAGCAGGGTAAGAGTCGCCTCGCCTAGTTACAGCAAATATGAATGTG
ACCCTTCATTAGTTTGATCATGTGATACATGGGTCTTTTGATGTCCTCATGCACTAGAAT
GGAGCTGTCTCAGTGGAAGGATCCCCAAACAGACAAGGTAAAAGTGGTCCTAAAGCCACA
TGATTGTGTAATGAAAACCCGTATTTGCTACATACATAGACAACAAGAAGACAATGCACA
AATCACATGCCACAAACTTATTTCCATGTTCGACAGATTTAACATTTTACCAAAGCTCCT
GTAACTGCACAGTTAGAAACCAGGCATTTACAATTGGTACAGCTGTTATTACGGTACTAA
AACTGTGATCAGCACCTCATCGAGTAAACAAATTACGTGCAGCAATTCTTTGACCAAAAT
GAAACAACATGCGGTAGAACATAACATGCAGTAGAACATAACAGGGAGCATTATGTGGAG
GAACTTAACAGCGAGCATTAGTTAGGGCTACCACGCAAACGGTGCTGGACTGAACAACTT
GTCATTGTAGACACGGAAACTAACTAACTTGAGCAGCACAATGTGCTGCTCAAGTTCAAC
CAACCATCCATCCCCTCTTCTGCTCTAAACCAAGGAACCTCCACGCTTGTCCCTGCTCCT
AGTACTAGATTTTTACACAGAAGGAGCTAGTGGCAAGACCCCCGCTTTGCCAGTTCACAA
ACCCATCAAGCCTATCGAACTGCCCCCTTAGCTAGCGATGAGTGAATTGCAACGTTGGCA
AGTAAGGAGCAAAGGGGAGGGGCACCTAACTGCAGGCGGAGCTGAGGCAGAGGAGCTGGA
GCTCCTGGGAGCCGTAGGTGAAGGTCTTCATCTCGTAGCTGCCCAAATCCAGCAACAAAA
TCAACAAAAAAGCTTCCAATTCAGCTCGCCGGCAAAGCCGACGCACCACCGCCGCCGCAG
TTCATCATCAGAACAGTAAACCCCGAGAGGGTGAAGAGAGAGCGAACCCCTACTTGCGGT
TCATGAAGAAGGACGGATCCAGGCAGACGAAGTCGTCCTCCTCTTCCTCCTCCCGCTCCC
TCGCGCCGCCGGCATCCGCCATCACTCAGCTCCTTCCCCCCTCCTCCTCCTCCTCGCCGC
CGGCGACCGCAGCTGCAGGTTAGAAGAAATTGGAAGTGGGAGTTCGCGGCGGCTCGCTGG
ACCGCCCCCGGTCCCCTTGTGGGCTCAAGCCTATGATAACGGGCCTTAACCGGGCCGCGG
CAAGCGCCGCGCGGCTGGGCCCGGCCCATGGGCGGGAACATTCTAGGGCAGGCAGGGGCA
GGACGGTCATTCCACCGCGCCCGCGATCGCGCCTCCCCTCTTAAAACCCTAAACCCCACC
ATCCCGGAGGCGTAAAGCGAATAGTGTGGAAGCGTCGAGGTCTCTTGCTTGTTTCCCAAG
AAGAAGAAGGAGAAGAGCGGCGTCTGATCTCGGCCATGGCGGCGATTAGGCGTCTGATCC
CGTCCTTCAACCGGGTGCTGGTGGAGAAGGTGGTGCAGCCCAAGAAGAGCGCCGGCGGCA
TCCTCCTCCCCGAGACCTCCAAGCAGGTACGGCCCGCCCTTCTCGCCTCCCCTTTCGTGG
GTGCCGCTGCTGGGTAGATGTTGCTTCTTGCTCCTGCGCGTGGATCCCGTCTGGGGGCTC
TGCTTAGATCTTGGTCGGTCGACGGCCGTCTAGGTTGCAAATTTGTTTGTCTGGTGGAAT
TAGTTCAGTTGGGGCGTGTGGCTAGGCCGGCCGCTTCAGATTTGCTTTGTGTGGGTTGCA
GATTCTAAGCTAGAATGGTCTACTTTGAGCAATTTGAACTTAATTACAGTAGTAGGGCTG
GCATCTGCGCTGATTCCACAAAGAATCGACTTTTACCAATGATGTATTCTTCACATTCGT
TGTGCTGCTAGATTCCACAAAGAAGTTGTAGCTGTACAATAGTCCTGTCCCGTAGTGCAC
TTTAATGATCCCACATTATGTCATTATCCTTGAGAACACGGTTCATCAAATGGTTCATAC
GGAGTGCCAGTTGTGAACATTAGCGGGTGTCTGTTCCTGTGGGGACTGCTTATGCTTCTG
ATGTGGTTACTTGTTAGGTAGAGAGATACCTAGTTGTGTGGTCTGCAAATTGTTTTCTTG
TTCAGCTGGGGATGTGGCTAGACTGGCTGGCTGATTCAGATTCACCTTGTGTATTGCGGG
TTGTTAGCTAGACTGATCTTGTTTAATCAACTGTAGTTAAATTGTGAAGTTGCAGTCAGT
TCTGCTTCCATCACGAATTTATTGTTGCCACCAATTTTGCATTTTTCATATTTGCAATGC
TACTAGATTGCTAGTTTTACTGTAGTTCTGTCTCATAGTCCTATCAGTCCACTTCAACTG
GGCAGTTCATTTCCAGTCACTCCTATTAGTAGTGCAGTTAACTGACTGGTTCATGACTCA
TTAGTTCAGATTTGACTTGATAATTTGACTGTCTGAATCAGTTCATGACTTGAGAATGTT
TTGGTGAACCCAGCTGAACTCTGGTAAGGTGGTGGCTGTTGGCCCTGGCAACCGTGACAA
GGAAGGGAAGCTGATCCCTGTTGCTCTCCAGGAAGGCGACCATGTGCTCCTGCCTGAGTA
TGGTGGTCTTGAAGTCAAGCTTGCTCCTGAGAAAGAGTATGTTACTCATTGCACTATCAT
ATTACTTCTGTTCTGATGTTTTTCTTGGTTTGTGTGATGCAACACAATGTGCAACATCCT
AATTCAGCAGCATAGTGCACATTTGCGTCACTTGTAGAAACAATTGTTTTCATGCTTTGT
CACTGTTTGATTATTCTGTCCATCAACTTACGAAAATGAATTCTGTTGGGACACAAGTCG
TGATACGTGGGTGATTTTTTGAAGTGCTAATATCAGTATATCACTAACTATACCACCTGA
TATCCTTCATTTAAATGCTGCCACAGCAACTATGTAGTTGGTAGTAGCATCTTTCACACT
GTCTCTGTTGCTACATCAGCCCATTTCGCCTTAACTTGGATAAGAATAGCAGATGGATAG
CAGATGTTTAACTTGAGGGGATGCTAGCATCTAACTGTGTTATTTGGAACTTTTGCTGTT
GCTAAAGATAGCAGCTCTTTCCACTAAGACTACCCACAGTGGAACTAACATAGGTAGTAC
TCCCTCCGTCTCAAAATAAGTGTCTTAAGTTTAGTACAATTTTGTACTACAGCTAGTACA
AAGTTGAGACAGTTATTTTGGGACGGAGGGAGTATATGATACTACTATATCATACTCTCC
ACTATGGCCACTCTTCTAGATGCCATCTAAGCAAAAAATATGATGTGGCAACTAATTAAT
CAGAAGAGAGAGAAATTGAGTAACTTAGCATGTTACTACCCCTATGAAGTAACATAACGC
ATATCAAGGCAAGATGAATCTATAAGCTAATAAATGAAAGGCTCAATGTTACTACCCCTA
TGTTATTATCTACTCCCTCCGTTCCAAAANNTAAGACCTTTTAGGAATTTCACTAGGAGA
CTACATAC