| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_43982
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59871 |
8 |
1520 bp |
MLOC_59871.6 |
Available |
Available |
LOC_Os04g57380.1, FRAME:+2, EVALUE:3e-109, 13104.m06001 protein acyl-protein thioesterase, putative, expressed |
| MLOC_59872 |
1 |
1183 bp |
MLOC_59872.1 |
Available |
Available |
LOC_Os04g57370.1, FRAME:+2, EVALUE:2e-145, 13104.m06000 protein acyl-protein thioesterase, putative, expressed |
| MLOC_59873 |
1 |
798 bp |
MLOC_59873.1 |
Available |
Available |
None |
CDS Structure of MLOC_59871
CDS Structure of MLOC_59872
CDS Structure of MLOC_59873
Contig Sequence (8722 bp)
>contig_43982 8722 assembly3_WGSMorex_rbca.fasta
CCCCCCCCAGCCCCTCCGTGGTGGTGGCAGAGTGTGCACTCGTCTTTTGGGTCCAAGTCT
AAAGTGGAATTTTGGACACTCTATCGGTATCAAAGGCGTTATATCGAGTTGGTGGCAATT
AAAATTTTATTAGGGCGTCTATGACTTCATGCGTTTCATCATGCATTTCTCACTCGGTAA
AACTAACACCACACACTCATAACATTTCACATCATTTTAGTGTAGCTTGTTTTCACAATC
CTTGAATGACAACCAAAAGAATATACCTGAAGTACTCGCCCGGGTCTTCACTATATATGC
ACCTTCAGAACTTGTTTGGAAAGAAAGCTGCATGTGTAGGTTGAGTATGATAATCCTGGA
GCTATAGACTTACATTTCTTCTCACCATCTAATATATGTGCTAGCTATGGGACATAGGAG
GAAAACAAAGAAATTGGAAGGTGTCTCATTCTATTTCCTTAGTTGAACATGTGCGAAGCC
GCCTTTGTTGCACACTCTTTACTCACGAAGCCATTTCAAGCGATTGTGATAGTGTCGCTA
AGCAAACTGATAATATGGTCTTATGAAGGGAAACACCATTCTCAATGACAAGAATATGAG
ATGTACCATAGCAATCAGGGTCTCCATGTGATCTCTAATAGCAGAACAGGGGTCAGAGCA
ATCGTGATCACCGGGGCAGGGTCGTTTCTCTAAATTAAGCATTACAACCTATGGTGAGAG
CATCTTTTGACCGGGCACTCAAATTATAGCGAGTTAATCATTTCTTCAACGAAGGTGTGG
TTTCCCTGCTTGTAATAGGATGGTCGTATGAATGGAAATGTGATACTCGTATACATTCAT
TTGTTAGCAGCTGTCGTGATTTTTAAGACGAAATTTACACATTTTTTGTGTGACTGGTGG
AAATTTACACATTTTTTGTGACGAATAAAGAAGCAATGCAATCCCATCCGCGATGGCCGG
CGCCGTTCGCCGTCGCTCCGTCCCGTCGGCGGCCGATGGTTGCAGAGCCAAAACACAACG
GCATGGGGTATGGTGAGGGCATATTCGATCCAACCGCCCACGCCCCGCACGCTGCCGCCA
CCGTCGTCACGCCTCCCACGCCCGCACTATTTCCCCTGCCCGCACCTGCCTTCGTCGGCA
CAAAACCGCCGCCACTTTGCACTGCCGGCCACGCCGCCGATCGACCGATGACTCCGCGCT
GTCCGGATGGCGGCGCATCCTCCCCCTGCTCCTGCCGCTGCTGCGGCGGCAGCAGCGACG
GCCGGCGGGCTGCTGCTGTGGCTGCACGGCTCCGCCGAGACGGGCGAGCAGAGCCTCGGC
CAGATCGCGCCCTACTTCTCGGCCGCCCCCGCCATCCGCCTCTCCTTCCCCACCGCCCCC
GTCGCCTGCTATGGTACGCTCGCTGCTCCTGATTCGATGGGCAAACACACAAACACACCT
GCGATTTTATTCAGTTGCTGGATCGATTTGCGGTGCTGCTGCTGCAGGTGAGGTGGTGCT
CAATGCGTGGTTCGGCATCCCGGAGGTCCCCATAACCGCTGTAATTCCCTGCTCAGTTTA
CCCCCACAAATAGCCGCTTACTCTTTGAGTGATTCAGAAACAACCGCTGCAGTTTCCTGC
TCATGTTTACTGCTTACTGTCGAGCCATTTGCCTATTCTCATTCTCTCTTCAGTCTTCAG
TGTATTATATTTGTTGCTACAAAATTGGCTAGTCTTATTTGCCGATGCTGCAGAGTATGC
ACGCATCAGAAATCAAGCTTGCTTCACGCTTTGTTTCTCACACTGCTCCCCCTCCCCCTC
CCCCTCCGGTAAATAATCTGTATATCGGAACTGCTAGAGCTATTTTCTGTCAGTTTACAA
AGTAGATATTGTTGAAGAACATAATGAGTAAGACTCTAAGTCTAAGCTTTGGTGTCTTTT
GCACTGTTACTTCTGAACAACACGAAATCAGATTCTCATCAGTTTGAAGATTCAAAACAT
GAAGTTTTTTAGCACTTCGCATCATAAGTTCATAACAGGTAACAGACCGCTTGCGCAAAA
CTAACCATTTTAGAATCCTCATGGACATTCAAAGAGATCAGTGTACAAGTTACAAAAGCA
AGGCACTAGAACTCAAAATTGGACTAACCTAAAGTCTCTAAACATTTACAGGCCAATACC
TCTTTTGCTGTTATAGCATTATTACTATGTACTTTGCTGATTGTGCCAACTTTGTTTCTT
AGACCACTGTTAGAGATGAGCGAGGAGTCCTAGAAGCTGTTGAGCACGTTCACGAAATGT
TAGACAAAGAAGTGGCTGCCGGGACGAGTCCTACAAACATTTTCATCTGTGGATTAAGCC
AAGGAGGTATGGCGGTGAAATATGCATCTAATCTTCCCTGTCTTCAACACATTACTTACC
GACATAATTATGATTTCCACTCCGTCTCCACAGGTGCTCTAGCCATAGCAAGTGTTCTGC
TCTACCCCAAGACTTTAGGTGGGTGTGCTGTCTTCAGTGGTTCAGTTCCCCTGAGCAAAT
CATTTGCTGACAGGGTGACACCTGAAGCCAGAAAGGTAACAACAGCCCAACAACATCCTT
AGACTAAATATAGTTCGTAGACGCCGGTTTTTTCATGGTTCCATGGGATGTCACATAGGG
TGGATTGCTGTTCTAATGTTCTAGTATTTCTTGCAAATGTGTTGTTTCTGAATTCTTGAA
AACCTGCAGACGCCGGTTTTATGGTTCCATGGGATGGCAGACGGGGTGGTGCTGTTCGAA
GCCGGGCACGCCGGGTGCGCATTTCTCCAGGAGCTTGGCATGGCCTGCGAATTCAAGGTG
GTACATAAACATACTCGAAGTCACGACAGATTGATTTCAAGATTGGAGATTTGATTTTTG
ACCTTTGTTTGACCATACTGTCCTTCCTTGCGTTTTGCCATAACATGTAAGTTATCAGAC
TTATCCAACTCTTGGGCACTTGCTGGTGGATGAAGAGCTCCAGTATTTTCGACGATGGAT
ATCCGATCATCTAGGGATCTCCCAAGGAACTGAAGCTGCAAGACCGTCGTCATCGTCGTC
GTCGAACCACGAAGATCTACACTAGCTAGAGTACTTCACATTTTTATGGAGTAGAGTACT
ACTCCGTCCGTCTCATCATTCTTGTCGAACAACGACAAGAGTTATGGGGCGGAGGGAGTA
CTACATATGTGACCTGAATCTCAGTTTATCTTGGCACGTGGATGCTTTGGAACATGATCC
AATTAAAGTTATTTTTTTATAACATGCAACCAAAGGATTATGATACTATTATTACAGTTG
ACCAGTTTTCTGCCATCTCAATTCGTGTGCTTCGATTAACTGGCACGTGAATCTGACATG
GCTAGTGGCTCATCGATGATGGTTCTCTGATTCGTGTTATCTTTGTGATTGTATATTTAA
CCCTAATTCTTCAGTTAAAATTGTAGTGCTATCTTAATGTAATACTCTCTCCATTCGAAA
TTATTTATCGCACAAATAGATAAAAATAGATATATATAAAACTAAAATACATCTAGATAC
ATTTGTTCTAATGACAAGTATTTCTGGACGGAGTGAGTAGTTGGCAAAAAACCGGGTAAT
TTTTTTCTTTTTTTTAGGGTAAATTTTTTGCTTCTGATTGGCAGTGAAGGCGCACAGGCT
GAGGAGCTGCTTCGGCCCGGCCCATATGACCCATGAGTAAACGCGTCCGCTTCCTCTTCT
CCATCGCCGCAGCCATCGCCGCGGCATCCCTCCTCGCCGCCTCGCTCCGCCGCCGCGCGC
AGCCGCCCCGGCTCCCCGACCAGCTCCTCCCCGGCCCCATGGCGGCCCGCAACCGGAGCT
TCGTGCTGTGGCTGCACGGCCTCGGCGACTCCGGCCCCGCCAACGAGCCCATCCGCACCT
TCTTCGCCGCGCCGGAGTTCCGCCACACCAAGTGGGCGTTCCCCTCCGCCCCCAACTCCC
CCGTCTCCTGCAACAGTGCGCCACCTCCATCCACCCCCTCCTCGTCTCTCCCACCTTCAC
AGCATCATCAGTTTTTTTTTTGCACCGATTCATCAAATTAGCATCACCTGATTCTCAAGA
ACACTTATTGTTTTCGCAGACGGCGCCGTGATGCCGTCATGGTTCGATATCCACGAGCTG
CCCTTGAGCCCTGTGAGTTTACTCATTCACTCAATCCCTCCCGCTCGTGTATCCGGGGAT
GAGAGACAATTATAACTGTAATAACATTAGAAACTGATCTTTGCTGAAATCTGTAAACAC
TAGGGTTCGCCGCAAGATGAGAGCGGTGTTATTAAGGCCGTGGAGAATGTGCACGCCATG
ATCGACAGGGAGGTGGCCGCTGGCATCCATCCTGACAACATATTTGTGTGTGGGTTCAGT
CAGGGAGGTAGGATTGTCGCATGGGCGTTGGATATATTCTGAAGACAGCAAATTTTCGTT
CCGTAAATTGATAAGTATTGGATTTGCAGGTGCTCTGACATTAGCAAGTGTTTTGCTTTA
TCCAAAGACGCTAGGTGGCGGTGCCGTGTTCAGTGGCTGGGTCCCTTTCGGTTCGTCGGT
CATTGAGAGGATTTCACCCGAAGCAAGGAAGGTATGTGACACAGTCATCCCTTGATGCCT
TCTCCTTAGTTTAGCAATTAGCACACAATAACAAGATGTGGGGAAGCCTAATTTTATTGG
TTGGTATGAAATTGAACGCTTGTCAACAAGAGATGTGGTTGGTGATGTTTATGTACAGCC
TTGTCATTGCCTTTTGACTAGAATTATATTTCTTATGTCTTGATGCCTTCTCCTTAGTTT
AGCCTACAATGACAAGATATAAGGAAGCTTCAGTTTGTTGCTTGGTATAAAATCGAGCGC
TAGTCAACAAGAGATGTGGTTGGTGATGTTTATGTACAGCCTTGTCATTGCCTTTTGAAT
AGAACTATTTTCTATCACATGCCCGAACACTGCTGGAACTCTGCCTACACTAGTATGGCC
ATACCCAGGATCCATCATCTAAAGGTTTTGTCAATTTTAGTTGGCCTGGAACAAAACCAT
GTACTTATTGCAATAATTCCTGATCACCATGAGCATACTGGACAACTGAATTATGGAGGT
ATGGTTTTAGCACCTACTATTGGATTGAACTAGTCTCTATGAAATCGGCAGAAAGACAAA
AATGTACTGACCTGAATGTTGCCAATGAAATTTACTCTATTCCATACTGAAATCGGCAGA
AAGACAAAAACATAAGCATTGAACTCCAACTATTTCATAGTAGGTACTTGAAACTAGAAA
CTTAATATCCATCGCTGTTGCTTGAATTAGAAATATTTGCAATATTCCTCCTGTTACCCA
ACCTTGCATACAAATTATTACATCTAGTAGGAGAAGCGACTTTGCCCACCTTAGGACTTA
GACGTGTCTGACTGGGCAATGGTTTATTTTATGATAGCAACTAAATTAGGAAGAACACTG
TACAATGATAAGTACACCATATCTACTTTCTTATTTTAACCAGTCGGCTAGGATGCAGTT
GTATGAAAAATGATAAATAGCATGAAACCTTGAAGGATGCCATTAGCAATTTTACTCTTG
CGGCGTTCCTTTCATATGTAAACCTTCACGAATCTGTGAGTGATATGATATCTGTGACTG
ATATGATATCTGACACTTAACCTATTATATTGAGCAGTGTTAATAGTCTTTGCACTGAAA
TCATATAGTAGCATTTACTCTTCTATATGGGAATGTAACTGTCAGGGCTGATTCGGCTTA
CAGGATTTTCAAATCAAGGGAATAGTAAAAGTAGAGGATTGGGATGCCCTCTCAACTACA
GTACTTACGAATCTTTCATGAGGTCTCACCTAATGCTAAGAATCCTTAGAAATTAGGACA
ATATGGACACAGTCCTAAGGAAACTAGTTACCTCCATTCCTATGAAGTGAATGCCATACA
TAGGATAATATCCGTGGGAAGAAATCGTACAAACCGAATGAGGCCTCATATTGTAGGCTT
TTGTTGAATATGCTTATAATGGATTTAAGCCTATTGATTGAAGGAAGCACTTGTTGAAAA
AAAATAGTGAAATTCAATGTATGGATAGGAATTCTAAAGTAAATTTCAACTCTTTATAAA
AGCACGGATTTTGTTTGGCTGAATTTTTTTGTCGGAACTTTTCAGACACCTATTTTGTGG
TCGCATGGTATCGCTGATCAAGTGGTATTATTTGAAGCCGGTCAGGCCGGCCCACCATTT
TTGCAAAGTGCAGGCATCAGTTGTGAATTTAAGGTAATCTTCTGCTCCTCTTTTTCCCCT
TCTCCAGGCAAGCTTCGGTTCCTAGTATATTTCTTTATACAACTTTCCGGTTCCTATCTG
AGCTCTCAACTACCCATGCACATTTATCAGGCATATCCAGATCTAGGCCACTCGATCGCG
AAAGAAGAGCTATCCTCTCTCGAGGCGTGGATCAAGGGCCGTCTCAAAGCCTCGCAAGAT
AAGCAAAGTTAACGTCCTTCAGTTTGGGCCGCCACCACGCCCCCCATTATAGCAAAACCT
GCTAATGCAGCCGTGCTCAACCTGTATTCCCTAGTATATTGATGAACTCGGACGGTCCAA
GCTATTCTTGAGACTTTGTCATGCTCATGAATGTTATGTTCCAGGAAATTATGTACCGCG
GTATGTTGTTTTTCTTCTCCTGTAGGTTTGAGCTGGTACTACCTGGATACCGATGTGCAT
GTATCCTCTCTTCCTAGATTCCACCCATCGATACCGTCCATTGAGGCTTTCAGTTCCCGC
ACTTTTCAGCATATCATTACATCAGTTGCATATTGTCCTTTCTTGTTAGTAAGATACCAC
TGGGATTCTGCACCCAACATTGGATATACCGAAGTAGTCAGTGTCCTTTCTGGTTATTTG
TCTAAATGGAGCTCGTGTCTTTCCTACAAAGAGAAGAATTTCATGTCAACTCCCTGTGGA
TGCATTTCTTCCGGACAAAATCATGCGTTTCTTCTGGACAAAATTGTTGGATGGCGTTAA
GGTTCCGGTTTTGCAACATTTTCCCTTTCTATGGGCGAGTCAAAGGCCTTGGCCATTTTG
TGTTCCTTTCAACGAGACCGGGCAGTTTGATTGATTTGCCGCGCTTACCATGACCATTTC
AACAATGAGAATCAACGAAATACAGGGCGCGCGAACTTTGATCATCATGACTTTTGTTGC
GGCTGCCAGCTATAGATATGGATGAATACGTGCAGTGGAGACTCTTTTGTGGTCGTGTTC
AACTTTGGAGTAATGGTGGAACGCAATCAGTCCAAATCTCACCGGTAACATTGACCAGGA
AACCACTCACGGTTTGATATAAGTATATATGTGCCAAGAGCCCAAGTCGGAGGGCAGAGG
GCAGCCACCACTCTCACAAGATTATATCTCCCTCGTTCCAGCATCAACAAACATCACACG
AAAGACGGCCATGGCGGCCAAAACCCAGCTTGTCTTGTGCATGCTCGTCGCCTTCTTCCT
CCTCCTCCTCCTCGCCATGGAGGCTGCTGCCGCTAGGAAGCTAGATGAAACAGGTGACGG
ATCTTTCTCTCTCTCCCTCCCTCCCTCTGTATGTGTATCTGCACTTGTAAACATGATCGA
TGCTTTGCTTCTTTGCTTGCTTCAGGTGGCAACTACAAGGGCGAGTTTCCTCCAATGGGT
TATCCAACTGGACCGCCACCATAGCCCATAGGACTCCGGGAATATTTATAGTACAACATA
TTTATGCATACACGTGTATTCCTAATTTCGTGAGAAATAAACGACATGTATGTGTATATG
TACGTGTTTCTTTTACAGTACATCATCACCGTTACACTAGTACGAGCATGCATGTGTGTG
TGTGTCCATCTTTTTCTTCGCGCAACTGAATTTGCTGGATGAAATGATCGGCCCTTGCGC
GCCGTGCAATGCAAGTTTTTTTCCTTTTTTTTCTTTGACATCATCAGAACAAGTTTGTAT
CAGACGAATGGAACAGAGTTCCCCCTTATGTCAACTTATGCCTATCGTTTGGAAACTAAA
GCCTCTTTTGGTTATCATTTGATTTATAGGTAAGAAACCTTTTCATTGAGTTTAGACAAA
TATATTTTTCTTTAAAATGTGAAACATTGGTTCCTATCTCCCAAAAAATCCTACAAAATT
TCACTGAATCAAAGGAGACATGAAAGAACGAAATGGATAGTCACAACGAGATCAACAAAT
ATTCTCCTACTGTCAATTACACATAATCGTAAGGAAGCATGCATGAAGACCACTCGAAAC
AAGGGACCAAAAATCGGCAAGTTACTTAAATAAACAAACATTTGTCCATTGGTGTTGTTC
TGATCAGCCCACACGTCACTCGTGGGTGGCTCATATATCTAGGTTGCCGCCTCTAGTGTC
CCTTCCTCCGTGTCACCTCCACATATCGTCTTGGGGCAAAACCTGCGTGGAAGGAGGAGG
CGGGAAGGGGGGAGCTCTAATGGGAGCGACAGTAGGTGGCATGAAAGGGTGAACAACATA
GCTTAGGCCCTATTTGGAAGCACTCAGATTATAGAATCCGGTTTTTATAATCTATTATGT
CTCCAAGCAGGATAAATTATATTGCAGTTTATAAAAACTAGATGGACAGATTATNAAAAA
CTCATAATCTACTCTACCCCGACTAAAATCAGATTATGGATTACTAATGACCCATTATCC
TTGGAAAGTTGGAGATAATTAC
