Contig Data
morexGenes
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Map Locations of contig_43916 (5577 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_43916

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59791 1 2561 bp MLOC_59791.1 Available Available LOC_Os02g04670.1, FRAME:-2, EVALUE:3e-34, 13102.m00491 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed





CDS Structure of MLOC_59791






Contig Sequence (5577 bp)

>contig_43916 5577 assembly3_WGSMorex_rbca.fasta
CAGGGTATCTTCAACAGGTTTGGATGGCGTCATGTTAATAGGATAGGTGTTTAGTCATCT
ATATTTATACCATCTCCGGCTTGGGCATGAGTGATGCCTTGTATCGTTTGATTTTCCTTG
TTACTTCAGACTTATTGTACTCGGTGGAGACTTATTTTTGATTTATAATATATGGATGTA
TGCATCTCTCGATGCAGAGGCCGGGGCTCAGCCTCCTTTTCTAAAAAAAAATGATTCGTA
CTTATTTTCTTGTCAAAGCCCCAAAGCGCGGATTTCATTGAGTATAGAAGCTAAAAAATG
CTTCTGACTAGATGTACCTGCTACAGTTTTCATGAGATACAGATACTTTTAATACAAAAC
AGCCTACACCACTTAAAGCCCATTTAGACAATAAACAGACTTCTATATCGGGCTAACTTT
TAAATTTGATTTAAGCAAACAGAAATGTATGCCTTGTAAAAGAACTTTTTCAACGTGATA
ACAGCCAACCGGTTGGAAAATGGATATGGTGAACTTCTTGCTGGGGGATCCCATGTAAAC
ATAAAAACAGTATATTGATGAGCAAAGTAAAGTCTTCAAAACGATGCCAGCATCAATCAT
GCGATTGCTCCCCCGGACAAATGAAAACACAGGCTGCCCTACTTGACAACTTTTCCTGTT
TCCATACTTAACCGATGCAACCAAGCAGGCCGGACACGCCGAGAACTGGGTCTCCAATCG
AGACAGATTGAAGGTAATGCGGAAAATTCTTATTTCCCTCCTAATTCTAGACTTGCTTAC
TGTCCACTCACATCAATCAAAGGCAAGTGAAGCTGGACACAGATAGGATTGGCAGATGCA
TCCAAACGCGTGCACGCGAAGCTACGTGCACCGCACAAATATGCCGTGAAGCATGTCGCC
CGGGCAAGCATTGAGCCTAGCTCTGCACCTCTTGGCCACCAGCCGAGACAGATGGAAGGT
TGGGCGAAAAATACCTTCTTCATCCCTCACTAACTCTAGATGCATGACATGACAGTACAT
CTTGGGAACAACTAGAATGAAATGAGACCACACTCCAGCTAGTACTAGCATAGATAGCAT
CAATCAACTACTAAGTACAAATCAATCAAGCATGGCAACAAATCAGAGCCAACAAAGTAC
GGTAATTAATGGGATACCTGACGTTGCAGCCTTTGTTGAGGTAGTGGGAGACGTTCTTCT
CGACCCACTTGTCGGCGGCCTTCATGCTGGTGGCCATGTTCATGAGCAGCTCGTTGGGGA
TGCCGACCATGACCTCCAGGCCGCTCTTCCTGAGGGCGCTCATGGTGCCGTCCTCGGCGT
CGAACAGCTTCACCTTCTGGAACCCGTTGTCCTTGAGCATCTTCACCACCGTGTCCGGCG
GCAGCGGGTGGCTCGCCTGCGTGCCCCAGTTGGCACCTATCGCGCCCACCCCCGCCGCCG
ACCAGGAGACCACCACCAGCGCCACCGCCACCGCCACGAAGAGCGCCGCCGCGGCTCCCC
CACTGCCGGACCGAGGACGAGAACCCATGGACAGGCAGCAGATGAGCCCAACAGCAGCAG
CTCGAAAATGAAATCTTGGGCTCCGAGCTCAGATCTTGGACGAAGCAACCAGGCGAGCAG
ATACAAGAGGGGATCTTGTCGGGAACCTCCAAGAACACACCGAAATCGAAGCTCGGAGCT
GAAACCCTCACCGGAAAGAGAGGGGAGGCTCCAAGAACTCGAGAAGAAGGCTCTCAAAAT
CCCGAGCCACCAGAGCTCCACCCGCGACCACGAGCTGGAATCTTTTGGGGTGACAATAAA
TGAAGCCCGGGCGAACCCCACCTACGGACGACCGCGACGGGGGATTCCCAGGGATGGCGA
GCAAAGGGCGGGCATTGACGGCGAGCAAGTAGAGTACTAGTACTACCCAGGAGAGTAGGC
GAGGGCGGCAGAGGGCAATAATGGTGAAGGGTTTGCCAAAGCTGGCAGCGAGCAGAGCGC
AGAGGGATGGATCAAAGGTAGCAGAAAAGAGTGGCCTTTTCCCAGCAATAATCCCAGGAA
GGATTTGCAAAGGAGGTTGATTGTGTCAAGGGAAGGGAAAGACGTGATTTGAGTGTGGGG
CTGGAAAAGGGATTTGGGTGTTTGCTTGATCTCATCTAGCAAAGCGGCATGATCGGTCAC
CTCGAGATTTCCATGAACCTCAATAAAAGTTGGTGATGGATTGGCCAATGCTATGCCTCT
ACACGGGATATGGCATTCGTTCACGCCTCACACGCCTGGAGGTTGGAGGTTGGAGGTTGG
AGAGCTTGGGAGTTGGGAGTGCAAGCAAAACGAGCATGGTTTGTTGGACGCTTTCACTGT
CATGGTTAGTAGTGTTAGGAGCAGTGGTAAGGTAAACAGGGGTGGTAGAAAGAAAGATTC
GTCTGCGAATCCAGGACGGTTTTGCAGGGTTTGGGCAGAGGCCCGAGGAAGGAGGGAAAA
GGTTTTGGGGGAAAGGCTACGGATATTCGCCACTCCACTACCCTAGCTAGCGTTTGCATC
GGTAGCAGTAGCTAGCAGCATGGTCACTGCACTGCACTGCACTGCACTGGGATGCTGCTC
TGCTTCTGATGGTGGTGCCAGTTTTTAATTGCTTTCTGGAGCTTTTGCTTGGTTGGTTGC
TGCGGCTCAGGCTCGCAGTGAGAGGAGAGGCGATTAATAAACTAGATAATCAGGCTCTCA
GGGGCGTCTTGGTGGTTGGTGCTGGCCAGAATCTGGGGGTTTGGACGGAGGAAGATATTG
GTATTTTCAGGAGAAAGCAAAGCAAATGAGGACACAGCGTGGTGAGTCGATGGTGACTGT
GTATGTGCGTATAGTGGGATCCTTTTGAGGTGTCAGCCGGGACACGCCAGCGGCAGGGAG
CCCGTGAGCTTTTTTTTTCGGGGGCGGTGCGGTGCTGACCGACGATTGACCATCAAAGTT
GCGGCCGTGCAGCTGGCCTCCGGGCCCAGGACCAAATGACAAAAGTGTGGTGGAAGAAGG
GCGTGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGCACTTCTTTTTGTTTATCAAAAG
GAAAAAAGTTTGAGCGTGTGCACTGGAAATACGTCTACTGACCTGTTTTCTTTTATCTCT
CCTTTTGGTAACCTCCGTGTGTGTACAACGTAGAAGAAAAAACATCATTAATGATCTAAA
CGATTTTATGTTCCTTTACAGGGAAGTAGTACAAAGAACACGTTGAGTAGAAATAACATC
CAACTATGTAGACGATTTGACGACTACAAGCATCGAAATGAACCCAAGATGTGTCATCCT
TCTCGCCCCTTCATCGCCCAAGCCGGACAAATTTTATTGTAATAGACAGTCAAGAAATCG
GCACACTAAAAGCAACTCCTACGGACCGATCCAAACGGACGACGCTTTTGTCCGCTTTTT
GTCCGTTTGAATCGGCTGTCCGACTGGCGTCCGCCCTATTCTATATTTGGGTCAGCAGTG
CGTCTAACGCGTCAAACGATTTTATGTCCGCATACAATTTTTAAAAAAGGCCCGCAGCCA
TAGATCATGCGAGCGGCCATGTCTTATGCCGGCACCATGCCAACGCCGACACAAAGTTTA
TGTTGGCGCACTCGTCAGCGGCCGGCACACATGTCAGCACACAAAGAAGGGGGGAGGGAC
TTGAGTTCGACCACGCCACTGCGGCTTCGTGGTCATGCCAGCACACCTGCCGGCATATAA
AAAAAGGCTCAGGGTCATAGATCACTCCTCGTCGAACTTGAGCATGTTGGCATGCATCTT
CTCGAACCACGACCTCTTCCTTGACGACACGGTGTTGAGATCCACCTTCATGATTTCCAC
CCCGGTCATCATACTCGCGAGAACTACTTCTTTCGCCTTGGTCTTGGCGTTGGCGGCCTC
GATCTCTAGCATCTTGGCTTGTTTCTCCGCCTCCATCACAAGCATCTTGACTTGCTTCTC
CACGTCCATCTCAAGCCTCCTCCTTTAGATCTTCATGAAGGCGTTCATTTGCCCTTGTTT
GTAACGCCGGCACTCCTCCTTCCTTGAGTCCTTCTTGTTCATCATGCCCTTCACGCTTGC
GATCAAGACGTTGGACGCCGCATCCCGCTTGTCCTCCTTATTGGAGTTGGTCTTCCCCCG
CGGTCGTGCGTTCTCATCGTCCCCAACCTCCTCCACGACTTGAGGGCGGCATATTGCGCC
TTGAACTTCTCCTCGTCTTTGATGACCCTAAAGTAATGGGAGAGGTTGAAGCACTTGCCA
TTGTGTTGGACCTTAAATGCCTCCAAAGCTTGAAATGCCTACAAATATATTTCATGCAAG
CATATTGGCAAATAGTATGCAAATGAACACGCAACCATAAACTTGATGACACAAAAGAGG
GCGGCTTGCTAGCATACCATGTCTTGCATGCCGATGCCGCTCACGGGGCGGGACTTGACG
CTCTCAAGAGTGGCACAAAACTTNNNGCACTCTTGTTGGATCACCCTCCATCACTTTGAA
ATGGACACCCACCCCGTGCGTGCTACAACGGAAACTTCTTGCGCCCATGGAACTCACGGT
GGACACGGATCCAAAAAGTTGAATGCTTTTGTTCGACGCCCGTCTTGGGGTCTTGCCCAA
TGTCTTTCCAACACTTGCAAAGAAGCTTGTCCACAGCCGCCGTGTATGCCTTGGTCTGCT
TGCTCTTGCGCTTCGACTGCTTAGACCATGCGGCTTGGTTGGCGAGCTCGTCCTCGAACA
AAGCCCCCCCTTTGATGTCGCACTCGTCCTCTTCCTCTTGCCCGTAGTCCTTCGGAAACT
CGTGCTCGAGTGGGAAGCCATCCAGGTCCATGCCGATCTGATCACGCATGAAGGCCGCCT
GATCTTGATCAAAGGTGGACGGCATGAACGCCCCTCGGCCGTCCTGACTTTGTGTCTCGT
CGGGATCGTAGCCAGCGGGATCGTCAGTCGGCGCACCACCCTCAAAGATCAAGTTCTGCA
TGTAGTCATCGTCGTCGACGGCCCGCATTCCGTCGAACAGGTTGCGTGCGCCCGACAACA
CGTCGGCTGGCATCTGACGCGGCATTTCCTCATGCCTCCGGATGACGAGCCACCGGCCAC
CGGTGTGGTGTTGAGGTCGATGGGCACGGGCACGGACGTGGAAGGCGGCACCACGCTCAC
CTGCGACGAGCACTCCCCGGAGAGGCGGGAGGCCTGCGGGTAGACATAGAAGCCGGGCAT
CGGGTTGCAAGCTGACGCGTGGGGCGAGTCGGGCAGCACCATCCGAAGGGAACGCGGATG
AGCCGGTGCTGGTCGCGGTCACAACGGCGTTGATGAGGTCGTGCTGGTTAGGATTTAACC
CTAGCATATAGAGCACCTCCCTCGTTGTCTCCGCGACGTAGGCGTTCGTGACCTCCTGCT
GCGCGGCGACGGCGACGACAGCCACCGCGATGGCTACATCCCTCGTGCCCGCCGCGTGCG
TGCGGCCCTTCCTCTTAGCCGACTCCCTTGCGCGTTGTTCGGGCGTCAGCGTCTTCTTCG
GCTTGGGCGCGGCGGCGGNNNNNNNCTTGCCTTTGCCGGAGGGGGCGGTCGTCATGC