Contig Data
morexGenes
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Map Locations of contig_43915 (4587 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43915

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59790 1 1731 bp MLOC_59790.1 Available Available LOC_Os03g08790.1, FRAME:-3, EVALUE:0.0, 13103.m01017 protein aspartic proteinase nepenthesin precursor, putative, expressed





CDS Structure of MLOC_59790






Contig Sequence (4587 bp)

>contig_43915 4587 assembly3_WGSMorex_rbca.fasta
TTTATACACACTTTTTAAAACAATATTTTAACGATGTCACGGGCGCGTGCGAGTGTGGTT
GGTCTCGAAACGGTCAACGATAAAAACGGAGAGAACCGACAACTAATAACAAATGCAAGT
TTTAAAAAATGACGACAACCGGGTGCCGATGCAATGCTTATGATGCGAATGATGCCATGA
TGAATGCGAAAACCAAATAAATCACACGCGATAATGGAATAAAAGGGGAATCTTCTGAAA
CGTCGGTTTCGGGCCGTTACACTTTGCATCAGCATCCTCATCCTGTGACATCGCCATTGT
TGCACTTCGGCCGCCACACATGCATTATGTTCGCAACCAACACCGACGCACGTGCTCGCT
TTTTATGACGTATCCATCCAGCGAGGACTCTTCGGCAACCAGGTACACTTTGTCCCTTTA
TTGTCGACGTCCATTGTGAGCACCATGCCTGACAGGTGTTTGGTCAAATGTCACTGAACT
TATTTTGAAAGGCCATGTTGTTTTTTAGCGTACGAAAGATGACGGGGTACTCGACCATGA
AGGATGAGTTGTTGTGTGATGCATGATTGGTCGTATCCACGGATTGCATAGGCAAGAGCA
AAAGATTTATCGTCTCGCAGCACGTGCATGATTTGTTTAACGCGTAAAAGCACATTGCGT
CCTAAGACATGTACATCATTCATGATTGTAATGTGAAACCACTATCATATCGACGGTACA
CCATTGACACCACCGTCATCAAGTTTTGCGGCGCAATTGAATGCTAGAGGCAAGGTGACC
ATTACACACAATAGTCTAGGAGATTGTAAGTTCTATTTATTCTTGCCCAACTTGTTAATT
GGTTCATTCATTCACTCAATGTTGCTTGAAATATTTGTGTAGCATGTACGTGTTGCCGTG
ATGTACCACAAGCTAGAGGGCACACCATTTACACACATACATTGTCCGATGAAGCTCAAG
GGGTAGCATGTGTGGGACGCCATTATCCGTTCATGAAAAACTTATTGAACATCCTGCTAG
TTGAATTTGAACCATTTCTCGCTGAATTTGAACTATTGTTATACTCGACTTTTTTGCATG
CTATGTCTGAATGATTTGTGCTATTTTGTATTCGAATTTCGATGAATTTCGTCGGGTATG
CTTGATATATATGTACATAGAGTTGGATGGCCGACTTCCACATCCATGTTCGCGAACTAA
TCCTTCATATACATGAAAGAACGGAAGCGGAAATTTGTGAATCAGCATTGAAGATGTTCT
ATGAGAGTCTACAACCGGACATAGCAAATATGACCCCATAAACGTCTCTGAACGCGTCCG
ATCATTGACTAGACATGTCCCCTATTTATCCGCCCGCATAACCACACTCCTCATTTTCTT
CCGCACATGTTCGGTCAGTTGCACGTGATTGGTGAAGAGAAAAAGAGAGAAAGAAAAAAT
GAATAAAGAAAAGGAAAATGTGGTCCGGGTAGGGTGACGTCCTATGTGGCGAACTGAGTA
AACACGTATGTGAGCCCTCAACCTATATTTGAGATGGATATAAGGGTTCACAGATAGGTT
GGAGATATAAAGATGTTATGAGGAGTTTGATTGGGTTATTTTTTTTCTTATGTAGACGCG
TGTTTGATGCTTATAACTCCATGTGCGGACTGCACGTAATAAGAGCGCCTCCAATGGGAC
GATCCATATTGTCCGTTTGGGTCATCTGAACAAAAACTTGACCCTACCGGGCGACCCAGA
CGGACGTGCATGTCCGCATGATGTGTGTTTGTTGTCCATCCCGACCCAAACCGGACGCAA
AACTGGGCCTCAAATGGGCCCGTGACGGACAAAACTGGGCGCTCCCGTCGTCCGCTCTCG
TTCGCTCCCCCCTTTCGTGTCCTCGTGTCCGCCCTGGTCCCACCTATCAGCGGTCCGCCC
CTCCCCAAGGCCGCTGCCGGTGGAAGTGGTCGGCGATCCGTCGCGGCTGCTGACGCTGCC
CATCTCGACGCGGAACCTCCTCGAGCGATCCCTGCTCCTCGCGGCAGCACGCTCCGACGG
CGACGGCGAGGAGGCCGACGATGGAGGGGTGCGGGGACACGACGGTGGCGCGGCAAATCA
AGCATGTCGGGTTGGTGCGGAGCCACGTGTCGATGCACACAGCATGGAACGCGTGGCGAC
ACACCGGGAGCAGCCGCAGCTCGGCCTCTGGCCTAAAGGGCAAGAGGCAGACGACGCAGT
CCAGGGAGCTCCTGGGCAGCACCGCCAGCGCAGACGCCATGGTGAATTGGGGCAGCGAAT
CGATCAGATCGTTCTTCCCCTCATCTGTCTCGTGCATCCCGGGCAGTGGCGAGGGTGGGG
GAGACGGGCGCGAGCGGTTGGAGCGGTCGCGGAGGCAGACACTGATGGAGAGGGAGGCAA
TGACGACGAAGGCGATGAGTCCGACGATGATGAGGATGCAGGAGAGCACGGAGGTGCCGG
TGTCGTCGACGTGCCGCGGCGGAGGAGCCGGCGGGACACGGACGCGAAGACCGCCCTGAG
GAACGGCGGCGACGGATCAACGACGGCTAGGTCGTGTGCCAGGCGGACAGGGAGAAGAGG
AAAGTTGCGTCTTCCATGTAGGCAGACTCACTTGTTCGTTTTTTGTATCTCGTGCGTTGG
GTTCGTCCACCGACCGCGCGTGTCCATCTCATGTCCGCTAGATGGATGGACGGCCCAACA
GACAAAATTAGTGTCCGTTTGGATGGCGTCATTGAAGTTACTTGCAAGAACATTATTAAA
CCACCATCTGTCCTATTTCGACAATATCATCTTGAGCAACAACACGATTGTTCAAACTTC
AAATTTCGAAAGGAGGCTATGCCGTGGAGCTTGCATGCTAGGCCTTTTTATTTTCGAGCT
TCGGATGCTAAGCCCTGTTGGTCTGGGCATTGTGCAGATTGGCAGCACAAGCCAGTAGCA
CGGGCTGCCAGTACACTCCAAAACGTGCCAGCTTTTGCATTAACAGTGCCTGTCTGTATG
TGCAGCGTCAAAGCCTCGAACGTACACCTTGCGCGGCAGCCAAACGAAACAAACAAGTTA
ATTAAATGAACCAGACATCACTCCAGTAAATAGTACTGTAAATAGTTACGGCTAGTGCAG
TACGTGGTAATTCTCTAGTTCTAATGACACTCGCGCACGCACCCGTGACAAACTTTGATG
CCACATTCCTTATTGCACACACTGAAAATTAAGCCGGAGATTAACAATCATACGTACGTA
CGTACGTACACCCAAATGCATGGCTAATGTCTCGACTAACTGCGCGAACACGTGAAGGAA
AGTCGTCCGGTGGGAAAGGAAACTAGTTGCAGGACTCCCGGGCGAAGCCGACGCGCGAGT
TGGCGACGTCGAAGACGATCCGGAGGTTCTGCTGCTGCAGGTTGGCGACGACGTTGACGA
CGGAGTTGACGTTCTGCGGCGCCTCGGCCATGGCCAGGCACGCCAGCGGCGTCGCGCTGC
TGTGGATCAGCGTGTTCTCCATGGGCAGCGCCAGGTCGACGCCGCCGTCCATGTGGATCG
TCACGGCCGGCGCGCCCCCGGCCGCCACCTCGTCCGTGTTGAAGCACGTGTCGAACGCGC
CCAGCGACGTGTACCCGCTCGGCGCCGCGACGTGGCGCCTGAACTCCTCCCGCAGCGCCG
CGTAGACGGGCGCCGTCCACCGTGTGATGACCGTGCCGGAGTCGACCACCGTGCCGGCGC
CCGTGCTGGGGTCGAACGCGAACGATCCCGCCGGCACCTTCACCGGGGACCGCCCCACGC
TCAGCCCCGTCACGTTCACGTAGTAGAGCGACGAGCGGTGGGGGTTCTTGAGCATCGGCG
TGTACCTCGCCGCCCGGGGCTGGCCGGCGGTGCCCAGCCGGAGCGAGCCGGAGAAGTAGT
ACGACTTGTAGCTCGGGAGGCAGTAGGAGAAGACGCCGTTGTACATGTTGCCGACCTGGG
ACAGCAGGGCCATGGGGCCCCGGCCCAGGCCCAGCAGCCCCTGCTTCGGCAGGTTGGACG
TCGGCCCGCTCACCGAGCCCACGCACCCGAACGCGTAGTTGGGGATGGAGTCCTTGCCCA
GATGCAGCCAGTCGCTGGCCAGCTCCGCCTGGAAGGAGGCGTCGGCGAACGGCTTCGAGA
AGGCGCACGACGGCAGCGGCGCCGCGCTGTCGTAGGGGTCCCGGTCCGGGCAGGGCTGGC
CCTGGAGGATGGAGCACATGGAGGAGGAGCAGGGGAGGGGCGCGTAGGAGGAGGAGTTGG
CCGGGACGAAGAGGCTGTTGGTGGGGCAGGTGCCGCACGGGGAGCAGTGCGCCCAGGTGG
CGTCGGCGCTGGTGTCGAGGGCCAGGAGGACGGGCTGGGCCGGCGAGCCGAGCCCGGCGC
GCACCACGTAGGAGGGCGGGGTCTGCCCGGAGGCCACTGGCGCGGAGGTGACGCCGGTGG
AGGCGGCCTTGGAGGAGAGGAAGAGGAGGCGCGCGTCGTCGTCGCGGGCGAGCGAGATGA
TGGACTCGAGCGGGGAGGCGGACGGAGGGTGGACGTTGTGGTAGACGGAGAGGTCGGCGG
CCGCGGCGACTGTGGCGGCGAGGAGGA