Contig Data
morexGenes
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Map Locations of contig_43877 (5147 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43877

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59746 7 1862 bp MLOC_59746.4 Available Available LOC_Os07g42924.1, FRAME:+1, EVALUE:2e-125, 13107.m04499 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_59746






Contig Sequence (5147 bp)

>contig_43877 5147 assembly3_WGSMorex_rbca.fasta
CTAGAGGTTTAGGGCTTTTTCAGACACAACTTTGTCACGTGCAACCCTAAACCTCTACTT
CGTAGTTCTTCATCTAGATNNNNTTTCTGCGGAGCTCGGGCGAAGCTCTGCAGGAATAGA
TCACCACCACCGGAGCGCCGTCGCGCTACTGGGAAATTCATCTACATCCCCGTCTTTCTT
GCTTGATCAAGAAGACGAAGATCGTCATCGATTTATACGTGTGCGGAACGCGGAGGTGCC
GTCCGTTCGGCAGTTGATCGAAACGGATCATGAAACAGTGCATGAGACGGATCGTGGGAC
GGTTCGTGATACGGATCATGGACGGTGGAGATGTTTCTCGCGTCTTTCGGACGCATCGAT
TCCTTCTCCGGCGAAGTGCTACGTGCTGCTGTCAGTCGTGTCTGGCCCTACTCCTCGCCA
CCTTCTCCTCCTTCTGGCAAAATCAAGTTACAGCAAAATTGTTTTCAGACAACTTAGGAA
TATCCCACACGCGAGAAAGAAACCTTTGGATGGGCGTCCTCGGCTATTTTGGTAGTGGAA
GCTGTCGGACCACGGCCCACGGGCACAGTGAACTCGCTCAATTATAAAGCAGGACCTCGA
AACGCGGTACCTGTCCTTTCTCGTAGGCTCTCAGCATCCAGCTCCACAGATCACTGCACA
CGTAGCTAGAGAGGGTGAGCGAGGGACAACTTGCTGCTGGGATGACGATGGAGCAGAACA
CGGCGACGAAACCCATCAGATGCAAAGGTACTCGCGCGCCGCCGACGTACATGGCCTCGT
CTACCTCCATCCTTTCTTCAAATGCGTAGCCTCATTTGCAGCGGCGGTGAGCAAGGTGGC
CGGTCAGCCGCTGGAGATGGAGGAGGTGGAGGTGGCGCCGCCGAGGGCGCACGAGGTCCG
CATCAGAATACTCTGCACCTCGCTCTGCCACACCGACGTCACCTTCTGGCGCTTGAAGGT
GCGTCAGTTCTTTATATGTGATGCCACGGGTCAATTTTTTATAATACAATTTGATAATCA
GGGCATGCTATTTACAGTATTTTTCCTCTTTCGAGTAGGATTTCCCGGGCCAGCATCCCA
TAATCCTGGGCCATGAAGCAGCCGGGTAAATGCATAATATATCTACCCGTGTCCAAAGGA
CACACTAAATTCATCTGAAATCTTACTACAAATTCCACGATGAGATCGCAAATTATTTGA
ACTTTCAACTCCAATTATCCAAAAAAGAAAAAAACTTGCAACTGGCCAGAGCAACTATGG
CGAACTGTTTTTGTGTCCTTTATTCCCAGCGTGGTGGAGAGCGTGGGGGAGCACGTGCAC
GAGGTGGCCGTCGGGGACACAGTGGTGCCGGTATTCTCGGCGCAGTGCGGCGACTGCCCA
GACTGCCTCTCGGACCGCAGCAACATCTGCTCCGGGCTCCCCGCCGGGCCCGGCATGCCG
CGGGACGGCACGACCCGCTTCTCGATCGCCGCCACCGGCGAGCCCATCCACAACTTCATC
AGCGTGTCCAGCTTCACCGAGTACACGGTCGTTGACGTCTCGCACGTCGTCAAGCTCGAG
CCCGGCGTCCCGCCGGAGAAGGCCTGCCTGCTCAGCTGCGGCGTCTCCACCGGTAACTAG
TCTTCACTGACCTACTTTCGTTACAAAACAGCAACTAAAGCATCCGCAAACTGATTGCCG
GGTTCAGGTGTTGGCGCGGCGTGGAAGGTGGCGGCGGTGGAGCCCGGATCCAGCGTCGCC
GTGTTCGGGCTAGGCGTCGTCGGGCTAGCGGTAACGTCTGACTACGATCCCTCGTTCGGA
ATCATTGTACTCCCTCTTTAAACAAATACAAAAACGTGTGGATCACTAAAAATATTGATC
TAGATGCTCTTTATATTTCTTTACTGAGAGCATATATGCCACTGCTACTGTTAATATATT
GTGACAGTGTGATGCCTGGTTCGGGTTGTCGGCTGAAAGCAGCCTGATCTTGTAGTGTCT
GTCAGTCTGTCACAGTACACTGTACACCGCACGTTTCCAACTAGTGCGATCTACAATGTG
GCTTACTGTAGGTAGCACAAGGGTGCAGGATGCGTGGGGCTAAGCGGATTATTGGAGTGG
ATCTTAACACGGAGAAGTGGGACATCGGTATGTATCATAAGTGGATAGTTATGCAGGGCT
AATCTAATCATCTGAAGAAGAAACAATGTCAGGATAGTAATGATCAATCGCAGGTAAGAG
GCTGGGAATCACCGACTTCATCAATCCGAACGACATTGGGGAGAAGGCCGTGAGCGAGGT
GCGAATCCGATCCCGATTCCGATTCCGAATAAATCGTCGCGCGCGACGATCCGTTCATGC
AGTATTAGTTGCTAACGAGCTTTTCATCCATCGACATCTGTGTAGGTCATCACGGAGATG
ACCGGCGGTGGCGCCGACTACTGCTTCGAGTGCATCGGCTCGACGTCGGTCATGGCGGAG
GCGTTCCAAAGCTCCCGGAAGGGATGCTATGCACGGCCCATGCGGCTGGGCATGCCACAT
TTGCACATGATGTACGTATGAGTCTGATTCATGGTGATTGGTCAAAACAGGGCTGGGGGA
AGACGGTCGTGCTCGGCGTCTCCAGGGGCGGCGCGCCGATCAGCATTCCGCCGAACGACA
TCCTCTGGGGGAGGTCGGTCGTCGGCTCGCTCTTCGGCGGGTTGAAGCCCAAGACCGACG
TCCCTATCCTGGCGCAGAAATACATGGACAAGAAGCTGGAGCTGGACGAGTTCGTGACGC
ACGAGATGGGGTTCGACGACATCAACGGGGCGTTCGAGCTGCTCACCCAGGGGAAGTGCC
TCAGGTGCATCATCTGGATGGATGGGGCCAAGGAGACCGGTGTCGGCGTGGAAAATGGAG
GCGCCTGCAAGGCCAAGGCGTGATTGACATCGTTGTCCTCTCGTCACTAGCCACGATAGT
CACTGCTCGTCTGTGGGCGACTTCTTGTTGTCATGGGCTTTCGCTATAATGTCTTTCTTC
ATTTGGACGCGAGAGGGGATAGTTTATTTCATGAAAAAATGTATTTTAAACCCTGAATTG
ATAGAGGTCTGGCGGAACGAACATCAACTTAAAATCCTGATTGATTGTATCTTAAACTAT
GCAATTTCGGTCTTAATCAAACCTTAGCAAATTTTAACAGAGATTCATCTAATGGGCCGA
CCTGCTTCAGTTTTTTTCGTTTAAAATACAAACTTCAGAGTATATACATCACGATTGGGC
CGGCCCATCAATTTATACGGGATGAGATGGGTGGGAAAAGCCAGGGTATTACGTGGACCA
CACACGCACCAAACGATTTTTAGACGAGAAATCTTGATGCGATTTGGACTCGACTTGCCA
TCTTGTTTTGGATTTTCGGTCTCAGGTAGGGGTGCGATCGAGACTCCCTGCCTACTGCTT
CGTGTCTAGTTTTTACTAGCAGCAATTTAGCTAGATCGCTGATGGTTCATTCGAAATATG
TACTTACTAAAGCCCTAGCAGAGGAAAAAAGGAGTTATTTATTTACCTCGATGTTCCTTT
GGACGTCGAGCCGCAGCACAGAATTTAAACAAAAGGAAAAAAGAACAAAAAAATAAAATA
AAAATAAAAACAGAAGGGAAAAAGACAAGAAAAGAAAAAAGAAAGGAAAAAAGAACAAAA
AAGAAAAAACAAATAATGAACAAAACAAACTAAATCAACAACATGCAACATGCGTTTGGG
TGAACTAGGCCGGCCCAATCCCGGTCATCCCGGGCCAGGTCGACAATCCATGTTTGAAAA
ATGATCTGAAAGTTTGATTTAGACCGGGATTGCATAGTTCAAAATACAATCGATCGAGAT
TTTGAGTTGAGTGTTTATTTCGCCGAACCATTACCAATTCAGGATTTGAAATGGACTTTT
TCATTATTCTATAGAGAGAAATGTGTTTGATTTTTTTCTTTCAAAAATGATACTACCCTA
TAAAAGTTTACATAAAATACGAAGCACCTTGAACATACTAAAAGTTACATCTATGTTCCG
AGTTCAGGGACGTCCACTACTATCACGCCGACTAAGAGCATGTACACTCGGATATTACAA
ATATGATCCCTTAAATGCGTGCGGATGCCCGCGGATGCACCCGGTCAGTGATCGGACGTG
TCCCCGTCCGTTCATGTAGCCATACTTTTAATTTTTTTTTTATATATTCGGTCACTTGCA
CATAATTGATGAAGAGGAAGAGAAAGGAAAGAAAGAATGAACAAAAAACTGGCCTGGGGG
TGTGATAGCGTCTTATGTGGCGGATTGACCGGGCATGCCCGGCGCGACCACGAACTCTCG
TATCTTCCCTCATATTTGAGATGAATATGAGAATTTACGGACAACCTGAATGTATAAAAA
TGATACAAGGGGTTCGATTGAATCACTTTTTTTCTTCTCTCTTCTATTCGATCACTGACC
GGATACATCCGTGGATGTATGAGGATCATTTGAGACGTCCGGCTATACAAGCTCCAACGA
ACCCATCAAGTCTACTCTGCGGGCCAATGCTTTGAGCATCGTATGGTATGTTACACCTTC
AAGTACAACCGCGAACGCTCCCTGATATGAAATCCACCTTTAGGATAACTCTCATGATGA
CACCTTAATTGTTGTTCTTTGCCACCGCTACATCAACAATGATCTCGACGGTAGTGAAAT
CCACCTCTACTAGTAAAATACAAGGCTTTGGTCCAGACGATGAAAGGGTTTTAATTTCGG
TTTTGTTACGAACCGGAATCAATGGATGAATAAGTCCCGATTCGTGAGGCCAGGGCGCCG
GCCGGGCTGGAGTCTCGGTTCGAGACACGAACCGGGACCAATGGTCCTTGCTCCTCGCGC
AACTTTTTAGTCCCGGTTGGTGGCTGGAACCGGGACTAAAGATCAGTACTCTGTCCCGGT
TCTGGCCACCAACCGAGACCAAAGAGATGCCTATATATACTTGCTCGTGCCCACCCTCTC
CTTTGTTTATTCCAGTAGAAGGTGAGAGGTGTGTGCTGCTCTGTTCCGCCTATTGGAAAT
ATGCCCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCATGCTATAATTGCATTAACAGGAAAGAGTAATACATGTG