| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_438554
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59720 |
1 |
948 bp |
MLOC_59720.1 |
Available |
Available |
LOC_Os04g58640.1, FRAME:+3, EVALUE:5e-59, 13104.m06164 protein cleavage and polyadenylation specificity factor subunit 5, putative, expressed |
CDS Structure of MLOC_59720
Contig Sequence (4080 bp)
>contig_438554 4080 assembly3_WGSMorex_rbca.fasta
GTCGCCGGGCGATGGCTCCGCCACTGTCTCCTTGTATATCCCTTCTGACCTCATCCATCA
CCAAGGCAAAAAGATAAGGGAAGTCATCAGTGTCGCCATCACNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTACATGTCCTTGATGAGGGTAATGTACTTTGGTGGGACTTTGTGTTTCT
CCAAGGTCCACCACATTAACATTCCGCGGTATCTTATCATAGGCCTTCTTCAAGTCAATG
AACACATATGCAAGTCCTTTTGCTCCCTATATCTCTCACTGACGATTATCTGCATCTGGA
AGAAATAAAAGACCGAACTGCTATTTCAGTTTCTTCGACAGATCTATAACGGTCATATTT
ATGGCATGTCATGTGTCCGAGAGAAAAAAATTATGGCTTGTCATTAACATTATATAGTTC
CGTATGTACTATGTTGTGGCTGTTCCTAAATGGAACAGTGACATAGCTGCTAAGTGCTAA
CAGCAGAAATCGCTATCACAGTTTCCAATATTTAAAACATGAAGTACCTACCATGATACT
AACACCCAAGTATAATTTCCTGTATCTATATTCAAAGTGAACATCTGTAGAAGACATGCC
ACTCTGCCATGTAGTATTTACTTACCAAAGTATGAAATACCTTAAATCAGCATGAACTCA
TGATACTAACACCCAAGTATAATTTCCTGTATCTATATTCAAAGTGAACATCTGTAGAAG
ACATGCCACTCTGCCATGTAGTATTTACTTACCAAAGTATGAAATACCTTAAATCAGCAT
GAACTTGCGTGTCTAGCTTCTTACAGTAATCTTGGGTTTCAGTCCTATTGACAGCATGCT
CACTTTGTTGCCATGAGATGTTTTTGATCGTAGACCTTGTGTAATGTAAACTGTATCCAT
TCCTATAAAGCTGTAATGTGTTTCTTACTTACAGGTTGGTGAGTGTGTTGCTGTTTGGTG
GAGGCCAAACTTTGAGACCGTGATGTATCCTTATTGCCCTCCACATATAACCAAGCCCAA
GGTACATTCTTGCTTTAAGAGGTTTCTGTTACCATCTATTGTTGGGATTTGGGATTAGAT
AATGAAATTGACCAATGTGATGAACAGGAATGCAAGAAGCTTTTCATTGTTCATCTAACT
GAAAGAGAGTATTTCGCTGTTCCAAGGAACTTGAAGCTACTTGCTGTTCCACTGTTTGAA
CTCTATGACAATGTTCAGGTAAGGGACAGTCCCCCATGCTGAAAGTTAGCTTTCCTTGAT
GTTTAAAAACATTGTACTCATCCCTCGAGTGTGTCCAGGTATATATGCCTTAATAAATTT
CCAGTGACATGTTTTTTATTCCACCACAAGAATCTGACCCCATACAACTGTTTTTTTTGT
CTTGTTTCACATAAATGAATGATGGTACTACTGAATTAATTTCTGCGAGAAAGAATCCAT
GCCATCAGTTTTTACCATTTTTATTTCTGTTTAACCAGGCGATGGGGATTGGATGGCTGT
AACATGCATTTTTTTAAAAATGAAATTCAGACTCCACAAAAATTTGCTCAAACATGGCTA
TATTTTGCTGTTCGACTTATATTATTACATCGTGCCGTTATCAAGTGTCTTAAATGTGAT
GAAGGTCTGAAATCTGTTTTCTATTTGGATGCAGCGGTATGGACCTGTAATTTCCACCAT
CCCACAGCAGCTGTCTAGGTTCCAGTTCAACATGGTGAGCTCGTAAGGGTGATGAGATAG
TGTCCCCAAGGTCTCTTTCGGCAACCCACTCCGAGCGTCTCTTCGACACCAAACTGGCTA
ATTAGTAGCATGACGTGTTTTCTCAGTAACCATGTTTCCATGAATTATGCAGCACTATTA
GTCTATAAACTAGACATGTACCATTGTTGGTCGTTAATTTCGCGGTTCCGTTATTACATC
TTAAATGTGTTGTATGTGTGGTGTATTTTGTGGTTGTTGTTCTTTGTTCTAATTTATTTG
TGTATATGTACCAATGTATGTATTTATGATTTACATGATGATCTGCTGTAGTAACTCTTC
AGACTTGATTTCTTTTGTCCGTCGATGAACTGGGAGTGTTTTGGAAGGACCCACCCCTTC
AACTCGCAAGCTTAATTCTTATTGTCGGCAGCGTACCAGAATCTTTTAAGCTTTTTCTAA
ATATTTTTTGGCAGCATATTGCAATCATTTTTGGATGGCTACCCTTGGTCGTATAGGTTC
AGGAATGTGAGGTGACCAAAATGCCAAAAACATCTGTAATTTGGTCTGAGACCTTAGCTA
GCGTTGCTGCTGTCTGTTTCATGTATGCTCTCTTTGTCCGGAAATACTTGTCATTGAAAT
GCATGTATTTATGTATTTTAGTTCTAGATACATTTATTTTCATCCATTTGTGCGACAAGT
AATTCTGAACAGATACATTTATTTTCATCCATTTGTGCGACAAGTAATTTTGAACGGATG
GAGTATTCAAGTAATAATAACCATTTCAATTATGCAACTTCTCTCAGTCATACCCACTAG
TTTGGAGAAAAACCATTTCATTATACAATTTCTCACTTACACATATCCACTAACCCTAGA
AGAAGAATGAGATTAGATTTTGGTAAAAAAAAAGGACTGGGAGGCCACTCCATTCTATAG
CATATTCAGGACACTCCATTGCATCCGATGTTTAGGTACCCATGATGAGCTTCTGAATCA
ATTATCTGTTGGGAACTCTGCTGTCAAGCATGGCGTGTATGGAAATGAACTTTCTATGAA
TTCATACCCTTCACGAAACCCATGGTAGCGTGTCGGGCGCGTGTTTCCTAGGTATTGGAA
CTTCGAGCTACTCAAATGATAGGCCATTCCTCTCTGCAACGAGTCGCTCAGAAAGATAAC
TTCTTTATGAGGGTGAAATCCAAGGATGTAAAACTCTTTGGTGCCAAGGACGTCCTTGTT
TTCCTGATTTGCTTCTTCTTTGTACTCTGGAAATCTATCATGGTAGGAGTCGTCGTTGAC
ATCTTCTATGATCCAGGACCCATGAGCATCCGGATTGTATCTCAGGTCTGCCGATATACG
ACCAAGGACAAGATTTGTCTGATACTTTAAGACCCACTCGATAGGAGCACGAGACTCGTC
GAGGATCCAAACTTGAAGCCAACGATGGTAAGCAATTGATGCAAAATACACTCCCTTTTC
CGATTTTCCTAGTCGTCGTTGTGGAACTTCTTGCGTCATGGTAATACCTTGGGGCGGTTT
GATTACTTGGTACTTGCCACTTAACAAAGATATTCTGCAGATAGACAAATATAGTAGTTA
CAAAATTATCGCAAAGCCAAAAATATATATATTATAGGTCGAGTGATATTTTAGTCGTAA
ATTTTCCTAGTAGGAGGATAAATCCCTAGCCTCTGCACGAATCCATTACTAGTTGAAGCT
CGAATTCGTCCTATTTAGGTCAAATTTCAACTTCAATGTTATCTGAGAGCTTCTGATTTT
TAAGACCTCCCTACAAACTCACTTAGATCAGTTGGATCAAGATCAAACGGATGGACAATT
CTGTGTATAACTTGCCATTCTTTTTGGTTGATGATGTTGTCACATTTCTCAAACCGGACC
TTGGGAGCCTTAGAGCATGTGCTGCGCTGCTCACAGACTTTGGCATGGCTTTGGGACTTT
GCACAAACATGGCCAAGTGTTCTGCGCACCCGATTCGCTGTTCGGTGGAGCAGGTGGAGT
GGATAGCCGATGAGCTGGGATGCGAGGTGGCTGGATGGCCATGCCGCTACCTTGGGCTGC
CTTTGGGCTTGTGGAAAATATCGGCAACGCAGCTGCAGTATTTGGTGGATAAATTGGTCG
ATCGACTTCCTGCGTGGCAGGCAAGACTGCTCTACCGGTCTGGGCGATTGGAGCTAATGA
AGACCACGTTATCTTCTATGCTTGTTCATGCAATGGTGGCCCTCGATCTGCCAGTAAAAA
GCATCGAAGCAGCAAATAAGATATGTCGTGGATTGCTGTGTGGAAAGAACGTCGAGATGT
GCAGGGACGGATTCGGGGGGGGGGGGGGGGGGGGGCGGCGTGGAGGCGGACGAGGCGGTG
