Contig Data
morexGenes
Links



Map Locations of contig_43841 (4066 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43841

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59706 3 1412 bp AK358063 Available Available None





CDS Structure of MLOC_59706






Contig Sequence (4066 bp)

>contig_43841 4066 assembly3_WGSMorex_rbca.fasta
CAAACATGTCATTGTACATTTTAAAAGCTGGTTTACAGTTTATATAATTTGGCCTCCAAA
CATGCCCACCTGGATTATTTTTATAAACCAGATTATATAATCTATGTTCATAATCCAGAT
TATCATAATCTATTATGATTCCAAACAGGGCCTTAGATGTGCAATATTTATTTCATATTT
AAATGTGCAATAAGCAAAACCGATTACTTTTCATACTATGTTCGTCATGTTTATAGTAGG
CACAATTGACCGGTAGGCAGGAACAAAATCCCTCCTGCACAGATCTACACATGAGCATGG
TAGCATCTTGTACAGTCATCAAGAGCTAAGGGCAACTCCAACTATCATCAAATTTGCCCC
AAATTTCCGAATCGAACTACCCAAACACGGACCTTTTAACCATCCAACTCTAGTCTCCAA
ATATTCGCGGATAATGGGTCAGGCGATCCGGGAGTCCAAATATCCACAAACCAACACCAA
ATCAGCAATAAAGCCCTACTGCTATACTGTCTAATCTACTGCTATAAACAGAGTACCAAC
AAAAAGTTGCATCTCAAGTTGGCTTTATTGTTAACACAGGCGCCACCAAATGTTTGTGAT
GAATTGTCTTTTGGAAAAAAAAGTTCATAAATCAGCTACCAGCATCTCCATGTGACAAAA
TGCCAAATTCATGCACACTCTTGAGAGTTGTTCAGGGGGAATTTTTCCTCCCTTAATTAT
TACCTGCTGAGGATGAGCCGCCGGCTTATCGTGTGGCGTCAGCACAAGCGGGCTCGGCGG
CGGCCGGACGTACTCGTCGGCGCGCGCGCAGAGGAACATCAGCGACGCGAGCCCCTGCAT
GAGCACCCTCCACGAGTTGGCCATGGCTCCCACGAGCAAGTCCCCGCAGAAGGTGCCCGT
GGCGCTGCGGCCGAGCGCCGCCTGGTTCATGCACCGCATGCACCGGTCGTTCGCCGCCGC
GAAGAGGACCCTGGCCACGCCGAGGACGCTGCCGGCGGCGAGGTGGTATGAAACGCGGAT
GAGCGCCGCGGCTACGCGGAATGCCACGCACATGAAGAGCAGCGTGTGGAGCAGGAAGGC
GGTCGGCTTCTTACGCGTGTCGCCGCGAGGCCAGGAGGAGCTCCTGCTCGTCCCCTCCGT
CGCCATCGCCGTCGCCGGCCTGGGCTTTAAGAAGCACGGGACCTGGTAGGGTGGGTGGAT
TGGCACGCCATGGTGGCGTTAATACTGTATTATGAGAGACCAAGACTTGCTGGTGAGCAC
ATGTTGTGGGCCTCGTAGGTCCGGAGGGAGATGCGACTGCGGTACCTGACATGCGCCGTG
GGCGGCTGCGACGGTTGCGGTTGCGGCCACCGGAGAGGAGGTGCGCGCTGGTGGTGGCGG
TGGCGGTGACGGCGTTGTGGAAGGAGGGAGGGGATAGGTAGGTTGGGGCTGGCATTGCTG
CAACTTTTATCGTGGTTTTCTTTTTGTGTGCTCCTCTTCGTTTCTGCATTCGTTTGAGCC
TCCGTCGCGACGAATGTCGTTGTTTGGGTGGGAGCTGAAAGCGGCACGTCAGCTGCTGAC
GGGCTGGAGGTCGATGACACGATGGGGACAGGAGGATATTACTAGATGCGGTTTGGGAGG
CTGAAACCATGTGACATGGCAAGCAATCTATAGTAAAAAAAAATGAGAACAGAGGGAAAG
AAGCCTGTGTCTTATTGTTATAGGAGAATGAGGAGACTCGAACCCGGACAGGCGACAAAA
ACCTTTGTGCTGTCCACCACTTCATTTAGGAGAGCTTCTCGCAAGCAATTTATAGTTATT
TAATTTATTTTAAACCTTTGATAGAAGGAGAGGTTTTTTCCCAACATGGGTGACAGCATA
ACCTTCGTGTCGGCCCATCACCTCCTTTGACATAGGCATAGTGACGGTCCTATTTGACTT
ACTAGTGTCGATAATATCAGCTTTTTATTTTCTTTCTGACAGTTTGTGTTGGCTGTGTGC
ATCCTAGTTATACAGAGGTTGGGCGCTACTCATCATGATTTGTATCCTCTTGATGCTACG
TTATGAGTTAATAAAAATGCCCTTTATAAAAAAAGATTTAAGCATTACACCCGGTCTTTA
CATATTTAAGATGGACACAACCAAATAAAGTCCTCTCACACATATAAAGAAACAAATAAA
AAAACACGTAGAGTCCATATAACGCCTAAAGGGGAGGTGGACCAATACTAAGATCATGTC
GCCATCCATGTTGGTTAAAAGTATCATTGGTTGTATCATTTTAATCATGTACACACCTTC
GTAAATAGGTCTTGATTCTCCATGCGTTGTAGAGAGGACTATAAATAAAGAGTCCCGATA
CATCTGTAGATAACCTGCACCAGAGAAATACTTTTCTCGTTAAACACCTTATTGTTTCTA
CATAGTCAAAGCGACCAAATAATGGCGGTCGCTCCCACCCTAAGAAGAGTTCTATACCTA
TGATCAATCCCTTGTAACCAGTAGCCAAATACATCAGCAACCCTACAAGGAGGATACAAG
CCAGAAGCTATCTGGATGACTAGCCATATAGAACGAGCGAATTTGCATTGGAAGAATAAA
TGTTTTATTGTCTCATCACAATGAAAAAAGACACATTGCGAACTTCTATGCTAATTCCTC
TTAATAAGGTTATGTTTACTAAGAATGACTTTGCGTCGAAGATACCATGCAAAGGTTTTA
TCCTTAAAAGGCACCTTCATCTTTCAAATCTTCTTGTTATTATCAACTGATACATCAGGT
TGGATTAATGCTCTATACATAGACTCCACTGAGAATTATCCATTTCCATGAAGTTTCATC
GGAATACATCATGCCCATGTGACAAATGCACCATGGACAATCGATGGAGCAGGATGTACC
ATGATTGGAGTTTCGGTCCAATTAAATCTCTTCTAAACGTCACATTTGGCGGAAGTGATT
CCATTACCGTGGTGATAGTATCACCCTTATGACACATAATGTTGTATAGAGCCGAATATT
ATTTTCAGAGTGTGACATTTTCTAGCCACTTGTCCTTCCATAATCTAATTCATGAGCCTT
CACTAATCGAGAAGGATACATATGAGAGAAAATATTTATTCATAGCCATAAGACCCGTCC
AAAAGTGAAAATCTCGAGGCTTCCAATATACTTGGGATACCATCTTGGAACCCACATATT
TTCTCCTAGGGAGGGTTTGCCATACACCATGTTCCATCGGTAATTTAAACAACCATTTGC
TGAGGAGGGTTGTATTCTTAACCTCAAGGTCATGAATGCTCAACCCGTCTTGGTCTTTGG
CACGCAAACCACACTCCATTTGACCATTCGATATTCCTTTCTCTCGCTATCTCCTTGCCA
AAAATAATCTTGATCAAAAATCATCCAATCAATGTAAAACTCCTATCGATAACTGAAAGA
AGGAAATCATATACATAGTACTCCCTCCATTCCTTTATGTAAAGTGTATTATTTTCAGCC
CGGTGACCAAGATACACAACTATAGACAATTTATGACAAAATTATCCTTGTATAATTCAT
TGATTAGCAGCAAGTAAATCATTTAGGCTAGGAAAGGAAAAGATACACGCAATCGGTAGA
TAGATAGTTTCCTTTATTTGTCTACAAGAAGAAATACATGCAATCAGGGGAGAGATACTT
TTCTTTCTCTGGAGGGTCAAGAACGGAATTACGAGGATATGGAACAAATGCAAATTACAC
TATGGGTTTTATCAAAAACAAATACACCCTATATAAAGGAACGGAGGGAGTATCGTGTTA
CTAAATAATATTTTTTATGAGGACCAATGTGTTGGAAAGTGTTGCATGGGAAACAAAATT
TTCCTATGCTTACGGAGATTAACATCTACGAGAGGGGGAGTGCATCTGCATNCCCTTGTA
GATTGCTAAGCGAAAGCATTGAGAAACGAGGTGTTTGGGAACGTAGTAGTAATTCAAAAA
AAATCCTACGTCATACCAAGATCTATCTAGGAGAAACCAGTAACGAGAGAGGTTGTAGAG
CATCTNNNNNNNNNNNNAGATCGTTAAGCGGAAGCGTTACTATGAA