Contig Data
morexGenes
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Map Locations of contig_43832 (5374 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_43832

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59695 1 507 bp AK354142 Available Available None
MLOC_59694 1 757 bp None Available Available None





CDS Structure of MLOC_59695






CDS Structure of MLOC_59694






Contig Sequence (5374 bp)

>contig_43832 5374 assembly3_WGSMorex_rbca.fasta
CGGGACTGGGCCTCGTTGACGGTGATGCTGCGCCCGTCGAGCTCCTTGCCGTTCATCTCC
TCGATGGCCTGGCGCATCGACTCCTCGCTCCCGAACGTCACGAACCCGAACCCGCGCGAC
CTCCCCGTCTCACGGTCGTTGATGATCTGCACCCACCCCACAAAAACCAACACCAACACC
AAAACCAAAAACCATCAGATCCGGTCAGATCCGCCACACAAACCCCAGATCGGGGCCAGA
TCTACGTGAAATTCGAAGGGATCTGGGGGGGAGGAGGAGGAGAAGGGTTACCTTGGCGTC
GAGGATCTCGCCGTACTGGCTGAAGGCGGCCTGGAGGTTGTGGTCGTCGGTGGCCCAGGC
GAGGCCGCCCACGAAGCAGCGGTACTCCGTCTCCGCCATGGATCTCCTCCTCTCCTTCTC
CTCCTACGAAAACCCTAGGCTAGGCTAGCTACTGTCTCTCGGACCCGAACCGAACCGAAC
CCGAACCGAACCAGGAACCCGAACCGGAAGGGGAGGAGAAGCCAACCCCGAGAGCGATGA
GGAGGACGCTGCCCGTCCGTGGCCTCCCATTTATAGCGGCTGCCAGCCCGCCCCGATCGC
ATCACGCGCGCCACGCGGGTGCGCCCTGGCCCACGCGTCAGCGTCACGTGGCCGGGCCCG
CGTGTCGGTCCGGACCCACGTGTCGGCGGGTGGGCGAGGGATGCGGGTCTCGGGATTTGG
AATATGCCGGGGGCGGCCAAGTGGGTGGGTGGGTGGAGTGGACGGGAGATATTTTCGCTG
CCGCGGCTACGCGCACGCCTCGAGTCTTCTTTCCCAAGGAAGCGCGAGAAGGAAAATCTG
GATTTGCTTTCCTCCACAGCTAGCAGAACAAACCCTAGGGCAATTTACCAAAAAAATGAA
ATGAATTTAATTTTTATTTTATTTTCTCTATCTATCTAAAAGATAATTTGTTTATTTTTG
CAGGCGATCTATTCTATATCTATAATAATAACTGCGTCAGATTTTGAGAATGGTTCGAGG
GTAGGGACGGCATTAATCCCCTTGATCTTTTACAGAAAACAAAATCATTGTACTCGGATA
GTGACGTCTTTTTACACTTGAACCAATGTCGACATGTGAAAAGGGATCGGAGAAACCTCG
ACGCCCTCCAATACTGATCTTTTACAAAATATATGTGTGCAGATGCACATGTATTTTTGG
TTCAAAAAAAGATGTACGTATACTTGCTCCAGTCCGAGCCGCTGCCCGACGCCAATGCAA
GATTAACGTTTTGCTTCTTTTTCGGCTTCTATGTGACACGTTTTAGTGTAAAAGAATGAG
CTGCGAGTGCGGTGATTTAAACTTTTGTGTATACAGATACGCTTTCAAGGTGTGTGTTTC
TCAAACATTTATTGACATGGATAGAAGTTCAAGGCATGCGTTTCCTAGGACAATACCCAA
AAAAATGAATTTGCTTTTCTTTTCTTTATCTATCTAAAAGGTAATTTATTTATTTTTGCG
GATGATCTATTCTATACCTATAATAATAACTGCATCAAATCTTGAGAATGGTTCGAGGGT
AGGAGCGGCATTAATTTCCTTGATCTTTTTGTTTTTTGACCCGAATTCCCCTGATCTTTT
ATAAAAGAACAAAATCAATGTACATATGTGTGTGGATGGTGGCATCCTTTTTTTTACACG
TGAACGAAGGTTGACGTGTGAAAAGGGATCGGAAAAACCTCATCCCTCTCCAATACTTGC
ATGGGTCAAATCCAAACTTAGGTTGCCTCCTTGTGACCCGGCTCATGGAAGTGTGGAGCG
TTTGACTTGCTCTAGTCCGAGCCGTTGCCCGACGCTAATGCAAGATCACCGTTTTGCTTC
TTTGTTTTAGTGCAAAAGAAAAAGCGGCAGGTGTCGTGATTTATAACATTTGTGGATATG
AATACACGCTCAAGGTGTGTGTGACATGGATAGGCGTTCAGCGGTTCAAGGCGTGCATTT
CCAAAACATTTACACTCCCAATGTCCAAATTATCTCCATCTGAAAAATCAAACTATATGT
GCCTTGACCAGATTTACAGGAACCCCGGTAACTCGGTATACTCCATGTCCGGATATACTG
CAAATGTTTGTATATTGCTTTTACGAAGACCTGGATAGGCGTTACGAAGCCTGACCTGAA
TAGAAATAAAAATGGCAGGTTTCTTCGTGGCTTTTGTTTTGTTTTTAGGAACGAGGGCTT
TATTCAAGTCATATACTCCCTCCGTTCCTAAANNNNNGTCTTTAAAGAGGTTTCACTAGT
GGATTACATAAGGATGTATATAAACATATTTTAGGATATAGATTCACTCATTTTGCTCCG
TATGTGTATGTAGACTCCTAATGAAATATCTTAAAAGATTTATATTTAGGAACGGAGGGA
GTAATTTCTTCACGGCAATTTTTTTTTTGTGTGTGTGTGTGCGTGTGAAGAAATTGGTCG
AAACTTTGCTGGACCCGGTCCACCTGCACAGATCGAAGCGGCAAAAGTCGGGGGACCCGT
AGCGGCCGGGCGGGGCGCCGATCCCTAGGCGCGGAGCACGATGCCCCCACGTGACGTGGC
GCGGGGCCCACACCGCCCTCTCTCCTCCTTCCCTATCGCGGTGGCCTGCCTGGATGAAAA
CAACAATAATATCTCCGGGGCGCGAAATGACGGCCATGCCCTTCCGTCCGTCCGGAACGG
AACGGGAACTGCGGGGCGCACGCGCACGTCGGCGTCGTGGCCTCGTGGGTGGGTGGGTCC
GGCCTCGTCCTGACGATGGGGCTGGATTTGGTAAACTAATCCGCGGCAGGGAAGGGCAGG
GCCCACCTGCCTGCGGGCGCCGTGAGTGGAGTGGAGTGTGGATTGATTTGGATCAGGACA
GTGAGGTGGCACTCGGCTCGCTCCCTCCCTCGACGTTGCTTTCCCGTGATGGAACGGAAC
GGAACGGAACGGACCTTATTAGGTCTCGTGATTGACTGATTGGTTGATCAAAATCAAAAT
GATAGTGGAAAATGATTGGTTTTTGGAGGCCGCAACCGTGCGTTGCAGGACCGATTCGAT
GGGCTGTCTGATCCAGTCTCGTGCCAGCAGCAGCTGCAGGTTGAACAAACGGTGATGATT
CTTTCGAGGGAGGGCAGGGGCAAGAAAAACAACAAGAAGAAGAAAAATGCGAACCAACAA
GCTATGACTCCCTCTGTCTTAAAAATAAGTGAAGCAAAAGGAATTGGGAGATGGCCAAAA
GGAAAAAAAAGAAGGTCCCACCGAGACTTGAACTCGGGTTACTGGATTCAGAGTCCAATG
TCCTAACCACTAGACCATGGGACCGGTTCGATGCCGACAACTGAAATTGGATTTACTTAT
CGAGTACTGTTTACTCCCATAGTCCCATTAATATGGTTCCAACTGCATAACCCAGCACCA
TCAGTCGGACTAGCTGACTGCGGGCCAAAACTGGAAAGTTCAAACTCGCTTAATCTGATC
TTATTAAAAGCTCTGCTGATTTAGCCACGCGGCAAACGATGTGCGTTTGGCTCTGCGGAT
GTCCGATCCGTCACTTGGTCTGACCAAGGATGCAGATCCGTCACTTAGTTAGCAACAGGT
GCCATCCCTTGTTTCTTGATGCCATGCCATCCACGTTCCAAGGCGTTGTGCAAGCCATGC
GTCGCAGCATCATAGCAGTTTTTTCTTCTTCTTCTTCTCTTTTTTTTTTTGAGGGGAAGC
ATCGTATCCTATAGTAGGAGTTAATTGCACAGAACTGCGGTACTTGCGGTTAGGTTTGCG
GAGAAACACTGTATGAATTTCGATTCCGTGCACCTGCCGCAGTGTGGCGCTGTCTCCGTC
CTAAGGCGGGCGGAGATAGCGGTCTCCCCGCCGGCAACGTGTGAGGAGAGATGGTGGTCT
CTCCTTCGTCCTTGGCTTGGATGTCCTGACGTAAGAGACGGTGTTCCTCTCACCCTTCGT
TCAGTGCGTCTTTACGGCCTCGGCGCGTGCGAATCCTCTCCGTCACGGAGTTCATATTCG
ACTAGATCTTGTTGTTTTCTTTGGTGGCAGTTGTGTTCGGGCTTCTCTAGTTACTGTGTA
CTCGATGTTTGCAGTCCTGGCTTGTGTTAAATTTGCACCGTTTTTGTATTCACCGTCATC
ATATCCCTTAGCTGGTTGGTGATGGCTTAATTAATTTGGAGTTGGACTGCATGCCCTTTA
AAAAATATATCCTATCTGAACTTGACCTTATCTACCTTGATGACCATTTTCACTTGATTT
CATCCTCACATGGGCTACCTTGAAGCGTTTCTTTCGATGTTGGCCCATGTGAATTATTTA
GGGCGTGTTTGATTCACTAGATAACTTAAATCTAATGGACACGGTTTTTCCGGCTAACAG
TTCAGCAATTTGGAAGGGCATCGAGCATGGGTTGCAACTAGTTAAACGTGGAATGATCTG
GCGTGTTGGCAATGGGGCAAGCATTAGAGTGTGGAGGGATCCTTGGATCCCAAGGGGTCC
TCCGTTTACTCCTATTCTACCAAAACGGAATTGTCGCCTAAACAGAGTCCAGAATTTCCT
TGATGATCGTGGGAATTGGCAGCTAAACCTGTTGCAACAATACTTCTGCCAACCAGATAT
CGATGCCATTCTAAAGATACGTGCCTCTCCTAGCCAACAGGAAGACTTTATCTCCTGGCC
TTGGGACAAATCATATAATTTTGCTATGTCGCCGGTGCGGGACCAGGTTAGTCCGGGTGC
TTCAAGCTCTGCACCCACAGGCAATCGTCCGATCTGGAAGCTGGTGTGGAGTGCAGATGC
TCCCCCCAGATGCGGCACTTTGCATGGCAGGTTAGCTCCGGATCTCTACCCACAAATGCA
GAGAAGTTCAGACGTCACATTGGTACTTCAGGCCACTGCAGTCTATGTGATAGAGAGGAG
GAGTCGTCATTTCATGCGTTGCTGGTCTGTCCTAATGCCGCTCTCATGTGGGATACAATG
CAGCTATCATGGCCACTACCCAATCGGGTGGATATTCCATGCACTGGATCGGAATGGTTA
CTGCATTTGCTTGTTGTATCACATGAACATATCAGGAGCAGAATCATTATGGTACTATGG
CGGATATGGCATCTTCGGAATGAGCTTATACATGGTAAAACCATTCCCCCAGTGGATACA
TCTCGGTCTTTTCTTACTAGCTATTACAGTACATATCAACAAATCTCATTAAGTGTCGAG
GAGATTTTGAAAGGAAAGACTCCGGTGCTAGATACGAGGCATGTGGCAGCTCCCCAATCT
GTGCAGAAACGCAAACTGGTATGCCATGCCCGACAGAGCATGAGGTAGCACTGTCAGTCG
ATGGTTCATTCCATGCTGAGGATGGATCGGCTGG