| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_43795
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59653 |
1 |
2340 bp |
MLOC_59653.1 |
Available |
Available |
LOC_Os09g28660.1, FRAME:-3, EVALUE:3e-144, 13109.m02828 protein gibberellin receptor GID1L2, putative, expressed |
| MLOC_59654 |
2 |
1605 bp |
MLOC_59654.1 |
Available |
Available |
LOC_Os09g28630.1, FRAME:-3, EVALUE:1e-155, 13109.m02825 protein gibberellin receptor, putative, expressed |
CDS Structure of MLOC_59653
CDS Structure of MLOC_59654
Contig Sequence (6801 bp)
>contig_43795 6801 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCACCTCCATTTTCTTATTTTATTCTGTGGTCCACCCCATTGCACCTTTCT
CTCCTCCATCCACTTGCGCGTGTCCTTTGGGCACACGTGGCGACCCAAATAAATAGACGG
ACATGAACGTCCAGACAACGGACCCAAACGGACAAAAAACGGACAAATCATGTGTTTGTT
TGAGTCGACTGGTTGGAGTTGCTTTTACGGGAAGAGGAGAGAAAGAGGTTGAGAGAGAAG
ATGAATATGACATGTGGGTTCATCTAGTTAGTGAGATTATTAGGGGATTCCGGCGAGGTT
TGTGTTTTTCCTACTGCACCAAACTAGTATAGACTTTAACAAGGTCAGAATTGATTGGAA
TCATAAGTATATGGTACTCCCTCCGTCTCGGATTATAAAGTATCTTAGATTATGCACCGC
GACCAAGACACAGAGGAAAATGAAAGAAATTAATGTTAATTTGCTAATTAATTCATTGCA
TACACGTGCTAGTTAGTCTCAAGTCATTAAAAACATACACGTTCCTTATTTGTTGATTCA
TTTATTCATTTCAAAAACAAGAAACGAGTTCAAAGTTAATGCACGGCTTGGAATTATTTG
ATTTCGTAAGATGACTTATAAATCGAGGCGAAGGGAGTACAAATTTTAGGAATTAGAATG
TGAGGGTTCATTATTTCAACTTTAACAGAACGTGCGAGTTCAAGTTTTTTTTTTAACTTT
ACTCTTCCTGAAACATTGATCGAGGCAACGACAATGACATCTGTACTTATTCTCTCTAGT
TGGTATATTTCCAGACTTTACTCTTCCTGAAATATTGATCGAGTACTTATTTTTAAAAAT
TCCAGTTCCAGCGATCAATTGTTTTGATATTTGAGGTGGATTTCTGTAGGCAAGCACCGC
TGCCACCCTTTGGCTTCACTTTGAGGAAGTTTGACTTTCAGGTTAATCAAAGACCAGGTA
GCATATTAAAACAGAGAAATGGCTCTATAAACAGTGAAGTAAGTGCGATTAGTGCTCAGA
AGATCAATTATTTTTCCACAAAAACAACCTTTGCCCCTGCCCGGCGTATTCCCCTTTCCG
GCCGGGCGCCATGAATCCGGACGAGGAGGTCGAATTCGATCTGTCCCCGTTCGCCATCGT
GTACAAGAGCGGCCGCGTCCAACGCTCTGGTCTAACGTCGCGGAAGAGCGCCGGCACCGA
CGCCACCACCGGCGTCACTACCAGGGACGTGGTCATCGACGCCGGCACAGGCCTCGCCGC
GCGGCAATTTCTCCCCAAGAGCGTCCCGGAGTCCCAGAAACTCCCCGTCCTCGTCTACTT
CCACGGCGGCGCTTACGTCGCCGAGTCGGCCTTCTCCCTCAGGTACACCAGCTACGTCAA
CGCCCTTGTCGCTGCCGCCCGCGTCGTGGCCGTGTCGGTGGAGCACCGCCTCGCCCCCGA
GCACCCTCTCCCCGCCGCCTACGACGACGCGTGGGCCGCGCTCCGCTGGACAGCGACGAG
CTGCGTTTCGCCCGGCCCGGAGACGGAGCCGTGGCTGGCCGACCACGGCGACCCCACGCG
CATCCTCGTCGCCGGCAACAGCAGCGGCGGCAACATGGCGCACAACGTGGTGATGAGGGC
CGGAAAGGAAGGGCTCCGGGGAGGCGCGCGGATCGGAGGGATGGTGCTGCTTCATCCGCT
GTTCTTGGGCAAGGCTCCGGTGCCGTCGGAAGGCACGGACTCCACGGAGACCGCCGAGAG
GAACTGGCGGTTGGTCTGCGCCGGCAAGTACGGGCTCGACCACCCGTTCTCCAACCCGCT
CGTGATGCCGCCGGAGGAGTGGGCGGTGCTCGGCTGCCGACGGGCGCTGGTGACGGCGGC
CGAGCTCGACCCCTCCAGGGACAGGGCGCGCATGTACGTCGAGGCGCTCCGGCGCAGCGC
GTGGGGCGGCGAGGAGGCCGCGCTGTACGAGACGGAGGGCGAGGGGCATATGTATTACTT
CTCGAAAGTCGCGAGATCCAACCCCGTCGTGGCGGAGAAGGCGGCCAAGGAAATGGCCGC
CGTTGTGTCCTTCATCAAGCGCGTTACATGTACCAGTACATCGGATTGTAACATTAGATC
TACATTGTGAATGCAAACCAGTCTTGCAGTTCGATTATTACTTGCCGGCATGCGTGCACC
GATCAGGGCTCAGGCGCCGGCGATGAACGCCACGACGCGAGCCAAGAGCTCCTTGGCCTT
GGCACAGTCCGGCTTCTGGAGGAAGAAGACGTGCCCTTCGCCTTCCGACTCGAACCACGC
CACGCCCCCGCGCCGCCCGCTCGTGGTCACCGCCGCGTAGTACGCTCGGTCCCTGGCCGC
CAGCCAGTCCTTCTCGCCGGCGCACACGAGCATCCGCTCGCAACGGAGGTTCTCCAGCCC
CGGGGCGTCCGGCACCATCGGGTTCATCCTCGGGTCGTCCGCGCCGCGCACCGCGCCGGG
GCACGCGAACTCCCAGATCATGGCCATGTCCTTGGCCGTCGCCTCGACCTCACCTTCGAC
GACCGTGTTCCCTCCGAACCAAGGATGCAGAAGAATCGCGCCTTCTATTCTCGGCGCCGG
CTGGAACGACGCTCTGATGAGAACGTTGTGCACTATGTTGCCGCCGGCGCTGTCGCCGGC
CAGGAAAAGGCGCGCGCTGTCGCCGTGCTCGGCGAGCCACTCATCCTGGGCCGAGGCGGT
CCACTGTAGCGCCTCCCAGGCGTCGTCGTAGGCGGCGGGCACCGGATGCTCGGGCGCGAG
GCGGTACTCGACGGAGACGGCGACGACGCCGGCCGCGGCAGCGAGGGACGCGACGTAGTT
GTGGTACTGTTGAGAGACGGCCGACTCGACGAGGAAGCCGCCGCCATGGAAGAAGACGAT
TATCGGGAGCTTCTTTTCGAAGTGATCTGGGCTGGTGGGGAGGAAGAGGCGTACGCACAT
GCCGGTGTCGGAGCCAAGGACCACGTCTTTGGACGTGACGCCGGTAATCGGGTCGAGGCC
GGTGGGCGCACGCGCCGGGCGACAGAGGCGGTCCATCTTGCCGCTCCGGTATATGCGGTA
GTCATCGCAGTCGAACACTACCTCGTCGGCGCCGGAATCCATCACCGGAGTCGCGCGCAG
ATCTGAAGGTATAGTTTGTTGAGTGGTTGGTGGCAGTGGCAGAGACCGGTGGTGGACTCC
CTTTTTTAACGTTGGCAACTGCCCTCCGAGAGGGAAATATAGCAAAATGCTAGTGAAAAA
AAGAGAAAAAAAAAAGGAAAAAACGCCGGTACCACCCCAAACCGAAGCTCCACCGACAAG
CCATGCACATCATCGAAAACCATTCTTGGGCCTCCAATGTGACGCCTCTAAGAAGCAACA
TCGTCAACCGATCTAGCACAACCAAATTTTAGGTTTTCACTCGAAGAACACAAGCCATGA
GATACGGAGAGCGAAACGAGCTCCACGACGGTACCTTCAAAAAGGAAAACAGAATCCGTA
AATGTCGTTACCGTCGGCACTAACAAAATAAATGCAGGATTTTCATCCGAGGCCAAACCA
ACCACCAACAAACATGTATCCGAGGCCTACTAGCGTCATCGGGAACGGACCAGTCATGAC
CGCATGTAGAAACTCGACGAACACGAGCCCCATGGCTGGGCCGCCATGCCGCATGCACGT
CTGGGCGAACAAAAACAGATCCACCCACCCTCCGCCTCCGTGCGCAGAAGTGGACAAGGA
ACCGCAATGAAGCGCAGAAGAAGAGCCGAGTTAGAACCGAAGCTAACAAGTCAGCACCGC
CGCACACCGAGTACGCACGAACACCAGGCCAAACTGACCGCCTCGCACCATCGCGTGCAA
GGACAGGACCGGCCGAGCTGGACCTGGTCTGCCTGAAAACCTCCTCTGCGCCTCACACGC
TGTACGACGCGCCACTCCAAGGAGATGGACGTGGACACGCTTGATAGAAGGGCCCGCCAG
CTCCCCCCAACCCACGGCCTCACGAGATCGGGCACGGCCGCGACAAGGCCGCTCCTTTCC
CCTCCACCTTATGTTCTCCGTATAAAATCTCTCTTCCGTAAACCCCTATCTCTCCGCACC
ATGTGTTCCAGTTAGGTCTTCCCCGACCGCTTCCTTCCCCTTCACCTTATGTTCTCCACA
AAGCCTATCGTCCACCCGTTTTTTTCCCCTTATTGTTCGTCACGCAGGGGAGATACAAGC
AACACCACCCTGGTGGATGAGGGGGACGACCCATCAATAGTGGTTGCATCGAAGCTTCAT
CGTGGCTACATCGAAGCATCGTCGGAGCTGCATAGCAGCTTCGGCCATCGTTGCCTCATG
CTGCATACCAGCTTCCGCCACGATCGTCAACGAAGTTGCGTTGTAGCGTGCCCGCGCTAC
ATACCAGGTTTCGTCGTAGTTGTCGCCCCAGCTGCGTTGCACTTTCCGCCATGGCTGTCG
CGTGATGCGTTGCAGCAGCCGTCATCACTGATGTTGCATCGCATCTTTCGTCATGGGCCG
CCGCGCGCTGCGCCGCAACACCTATCGTTGCCGGTGCTACATCGCAGCATCCAATGTGAT
GCGTCACAGCTTCCATCATGGGCCGTTGTGCATTGCGTCTCAACACCTGTCGCCGTCAAC
GCTGCATCACAACATCCGTCGACGTCTCCGACGCTACAATGCATCATCCTCAAGTTGCGT
CGCAGCTTCTGCCGTCATCACTGTTAGACAAAGTCTATTGTAACCATTGTACATCACGTT
TATAGGATCACGAGAGAGAGCACGTCGGCCCTTTGCCACATGTATAGGACGTGACTACTC
TCTCTATATAAACCCCCATCCATGTAATCCTTGATGATCAATCAATTATCTCTCCAACTA
TCACCGTGTGGGTCGCAACAGCCGTCATGGCTGTGGCGCGCTGCGATGCAACTTAGTACG
TGACAGAAAATGGTGATAATCATTCTAAAAAAATGCTTGTAATCCCGGAGTGCAAATTTT
GAGACGCTGAAAATTGATACTCCAAGAAAACTTGAATTCCATCTAGGCGACATCACCTAT
TTATTCACAAATAATACTACTGCACCTTATTCACCCAGTAAGCGAACAAGCAGTGATGCA
GAGCAGGTTCCTCTCGAAGACAATGGAGATGATCTGCAGACCAACTCTCTATCAGGCACC
GGCTATGAAGGCGACGACGCGGTCCATGAGCTGCTTGGCGTTGTCGCACCCGGGCTTCTC
GAGGAAGAACACGTGACCCTCCCCATCGGACCCGTGCCACGCCGCGGTGCCGCCCCACGC
GCTGCCGGCCACGGCGTCGTGGTACGCGCGGTTCCGCGCGGCGAGCCCGTCCGCCAGCCC
GGCGGTCACGAGCATCCTCACGCAGCCGAGCCTCTCCAGCGCCGGCGCGCCCGGCGCCAG
CGGGTTGATCCTCGGGTCGTCGGCGCCGCCCACCGCGCCCGGGCACGCGTAGGACCAGAG
CATCCCGGTGACCATGCACGCGGCCGGGTGCTCCCCCTCGACCGGCTTGGTCCCGCCGAA
CCACGGGTGCAGCAGTATCGCGCCCTCCACCCTCGGGCTGCTGTGGTTGGAAGCCGCCCT
CATGAGCATGTCGTGGACGATGTTGGCCCCCGCGCTGTCGCCGGCGAGGAACAGGCGGGC
CGTGTCGCCGTGCTCGCGGATCCAGTCGTCCTGCGCCGACGCCGCCCACTGGAGCGCGGC
CCAGGAGTCGTCGTAGGCAGCGGGGAGCGGGTGCTCCGGGGCCAGGCGGTAGTCGACGGA
CACGGCGAGGACGCCGGCCGCCGCGGCGAGGGCGTTGACGTAGTTGTGGTACGTGGAGGA
GTCGGCCGACTCGATGAGGAAGGAGCCGCCGTGGAAGTAGACGAGGACCGGGAGCTTCGC
GGAAGGGTCCTGGAGCTTGGGAAGGTAGAGGCGCACGGAGAGGCCGGTGTCCGCGTCGAG
GACGACGTCCTTGGACGTGACGCCGGTGGCCTCGTCGACTCCGGCTGGGAGGATGGGAGG
CCGGTGAAGGCGCTCTATCTTGCCGCTCTTGTAGAAGCGGAAGTGCGCCGGTGCCTCGAA
CACCACCGTGTCGGCGTCGGCGTCCATGGCTGTGGAGAGTGGAGATGGTGTTTGGCTTGG
GCCTTGGTGTTGTGACCATCTGGTTCGCAAGATCTGTGAGATTTAAATGGCGATAAGGTG
CCAGGTCGGCAGTGAACTGGGGGAGTGCGCATGGCCACACGTAATTTTTGGCCTCGGATC
CATTGATTTGGGATTCCACCATCGGATAATGCATCAATCGAGACAGTTGGTTGTACGATC
CGAAGGCAATGTATACTCACATTTTTATCTTCAAAAGAATTAATTAGAACCAATATCAGC
GACAAGCTAATAATTGGCACGCGTGTGAAACAATCCAATCTAGTACTCCCTCCGTCTTAA
AATAACTGTCTTAAGCTTAGTACAATTTTATGCTAAAACTTGTATAAAGTTGAGACAGTT
ATTTTAGGACGGAGGGAGTAGTACTGTACGTAATAATTTACGGCTTTGCTAAAAATCAGT
CTACTGAGACTTCGCGGTCGATATTGTAGTCCGTTGATTTTGCTTCAAGATTTATGTAAA
TAAAAGAAATTCCCAGTTTTTTTTTTCTTTTTGCATGCTATATTACTTGACTGAGACGTA
GGCAATCCCAATTAATTATTGAACATAAAAAATACTAGCAAATGGCCCGTGCGTTGCAAG
GGAAGAAAAAAAACAATCTTCAATGATGATGACCACATTATATTCACACATCATCGCTTG
ATTTTGAAATTTTGTACACAA
