Contig Data
morexGenes
Links



Map Locations of contig_43794 (3890 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43794

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59652 2 3131 bp AK372823 Available Available None





CDS Structure of MLOC_59652






Contig Sequence (3890 bp)

>contig_43794 3890 assembly3_WGSMorex_rbca.fasta
AAAAATGCACTATAATTTGGGTATTTAAGGGGAAATGTGGGAATGAAACATGTCAAATAC
ACTAGAATTAAATGGTGTTATGGGATATGTGGGGATTGAGGGGTTTGACCGAGATAATCC
CCACAAATTCCCTAAAATACACTAATACCAAACAAGGCCTAAGGGATTGAGTGAAACCCC
AACCTTCACACAATCTCTTCAAATCCCCATTTATCCCCAATACACTAGGTAGGGGTAGTG
TATTGGGTATTGAGAAAAATGCACTATAATTTGAAGATTTGAGGGGAAAGGTGAAGATGA
AATATGTCAAATACACTAGAACCAAATGATGTTATGGGATGTGTGGGATTAAGGGGTTTG
ACCGGGATAATCCTTACAAATTCCCTAAAATACACTAATACCAAACAAGGTCTGAAGGTT
GGGGTTTCACCCAATCCCTAGGGGGATTATCCCCACTAATCTCCTCCAAAAGGCCTAAGC
GACTCAAAAAAAAAATCGAAGGCCAGATCCAAAATTGATACCTCATCAAGAGAGCCCCAG
CCCCTACGGAGCTTAGTGAATTTAAGGATGTTAAAAAACAAATCAGAATGTTTCAACGTG
AGCAGAACATCTCAATTTGCAGCTTGGCGCGTCCGAAAGACATCCTTGGCCAACCCATAA
TACATTATTTTATCGCCAAGCCAAACAGGAAAATTCCAGCCAACAGGAGATCCACCAACC
ACATAAGACCCTTGCACTGTTTCCGCGAGGTGCTTTGGGTGATTTGCCATCCCTCTGCTA
TTTCCTCTGCTGTGCTCCCTGAGTTATCATCACTTTTGGGTGGCCGGTGCACCATCATTT
GCGATATTAGGAGGAACTGCAGGCTGACCTGTCCGAGGAACTTGATTTCTTTCTCCAGAT
GAAGGAATCTGCTCTGTGAGTCCGTCCTTCACGGCTCCAGCCAACGGCTTCTCTAGTTTC
ACGGGTTCAGAAGAGGCGCTGAGATCAAGCCTCATTTTCTTGGAGAGTTCCATGACTGTC
TTTATCTCTGAAGCACAAAAAGGAAATGCGTGTCAAGACATCAATGTTCATAATTAATAA
AACATGAGATGCTACCTCTGGTGGTGGTTGGTTATTTAGTTGATTTCAGTACTTCAGAAA
GTTTGATGTAGACATCTAACATGAATTGCAGAAATTCCTTCACGGAATAAATGGATACAG
ATGGAACGATATTCTGTATGAGTTGCAGTATTGTGAAGAACAAATTTCTGCATAACTAAC
ACGGGCAAGAATCTAGAACGACATGGTACATAATATTTGTAACAAATTTCTGCATAAACC
CAAGTTCTCACATGTCAATAAGTAGTCATGATGTCGAATCTAAGAGATAAAACAAGTTAA
TAGTTTATATGCTTCAATCTGCAGGACTGTATAACATAGACCGCATCAAGCACAAAATGC
AAATGCACAACCTAGGTGATCCACACACAAAAAGGACCAACAAACTACACTTTGCAACAA
GTTGACTACACAACCAACAAAAGAAAGAGCAGTGTGATGTACATTTAACCAATTCGGCAA
TCTCATGATTAAACAACACAAGACTACATCAGTCCAGATTCAGAGATGCGTCTCCATGCA
ACAGTTCATCTATCGACATATAGTCCTTACAGAAGTAAGGGTTTAAAAATATCTCCTTCC
GTTGTTCCATTGTCTATATGATCAAATATAAAACCTCCATGACCAAGATAGTGGGCATAA
TTCGTAATGACTCTTTATTTGGGTTTTTTTCCCCATGTTTGCCTTTGCAATCAATACAGC
GCACATGCAAGCAGTATTTGGCTGCACTCATGTACCGTCGGTCCTACCAATTAATGGCTG
CAATGTGCACCTTTTACCTGATCATGCAACCTCATGAAATCTCTTTGCAGCACAAACCAC
GTTCAGTTGTCTATCCATTGTACTGAATTTTGTTTTCCTCGATTTTAATCAGATCTAAGA
TGCCCTTTGGGTGTCTTTATTTAAAAGAAAAGCTAGTTTGGATGTGGGAGGGCTCAGTCT
AAATATTTTAGGTTTAGTCTCGACTGCTAGATACCTTAGAAGAGTAATTTATTTTGGATA
AGAGGCAGCAGGATTCTGTGCTAGTCCCTATTTCACGTATTGCTTAGCACAAAAAAGGCA
TGAGACAACAAGTAACAGCTATGGTTCATCCAAGGTATTGGTATATCTTGTCCTAGCTCT
CAAGCTAGATGATATATTTCCAGAATGCTAGAATTATATTTGCTGGTAGTAACTAACCGT
TGAACAGCAGTGTCAAACCAAATAGACACCTCTTCACAGACAGGCCAATTAACTACACTC
AGAAGCTATCGGGTAGATTCCCTCCTTCCAATGCTTACATACAACTCCATCGATTCAATC
CTCAGCCTCTGTACTTCTTCACCACTCTCCGGGTTAACACAACCCTCCTCTGCTGCCGGC
AGTGTGGATAACATGACTTAGGTTACCTCTGGATGAAATTATGGTAATCAAAAGGATTCT
TATACGGATCGACGACCGAATAACCTTTTGTTTTCCAATTTTCTTTCATGTATCCTAGGC
CGTCTAAGACCATGGTGTCTTTCTAGCATAGAATATGTTGGAGAGAAACAAAATTACCTC
TCAGAATCTCGCCAGCAGCATCACTCTTTCGGAAATCAGTAGCTTCGTGAACCTTAAAAA
CAGAGGCAAACAGTTCAGAACAAATTACCAAGAAATTACCGGCTTAACAATACATAAAAC
ATATTTCAGCAAACATAAGCACGTGAGGGTTCAGATTGGTACATTTCTTCTTCGATCTTG
CAGCCGAAAATTGCCCAAAACCCCGGCTTTCCGGAAGGTTAAGAGGCCAACTAGCTAACC
ATGTCCACAATTCATAGCAACTAACTAGTACTAGCAGTGAAAAATATTAGTGCACTTGCG
TGTGGGAGTGCAGACCTGGACGAAGCGGAGGCGCAGGTCGGCAACGGTGGCCCGGATCTT
GTAGTAAGCGGAGGTGTGGAACCCCGCCTCCTCCAGCTTCCGCCTCTTCGGCGCCGGCGC
ATCGGGCTGATGAGGAAAAGGAGGGGGGAAATGGGAGACCTGGGCCGCGAGTCCTGGGGC
TGGAGGAGGAGGAATCGGCCGGGCGGCGGTCTCGGCGGTTGCCGTCGGAGGGGCCATGTG
GAAAGTATTATGAGAGACCTTCGCCGCAGGCTCTGTAGCTGTTAGGGGAGGAGGTGGCGG
AGTGGCGGTGTCGGCTGATGCGGTCGGAGGGGCTGGAGCAGGCGGCGGCGGGGCGGCGGG
GTCGGCGGCTGCGGTCGGAGGGGCTGGAGCAGGCGGCGGCGGGGCGGAGGTGTCGGCTGC
CGCGGTCGGAGCAGCCATATCAGAAGGAGCAACGGAGACCTTCGCCGCGGGCTCCGGGGC
AACTGGAGCCAGCGTCGCGGCGGCGGTGTCGGCGGCTGCCGCCGGAGTGGCCATGTCTCG
CTGGATGGGAATATTATTTACGACTCCCGGCGTTGGCGTACTTTATACTGGGCTGGCCTG
GCCTGGATCTCGGCTTCGGTGTGTCCGGTCTCGACCCGAGCTAGACCCACGGGCCACTTT
TTAACCGAAACTTTGAAGGCCTAGAATTTATTGTCTCCGACAGTGTCAAAACGGTTTTAG
ACTGGGGAAACACTTTCTATCTATAGTCTCATGCAAGGTCATCGTCGGATCAGGCAACTG
CCATCGATTTTAGTGAAATCTCACTGTCACAGATTTCGCCATATGGAAGAAAAATCCAGA
CAGTTTAATGCTAACCGCCCGCACCCTCCGTCCGTAACTTGCTCGCATTATCCCTTTCCT
CTCGCCTAGCACGCAGGCCTCCTCGACCTCGCCGCCAACTGCACCGCCCC