Contig Data
morexGenes
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Map Locations of contig_43780 (4101 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43780

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59636 1 1260 bp MLOC_59636.1 Available Available LOC_Os02g11060.1, FRAME:+2, EVALUE:1e-29, 13102.m01246 protein WD domain, G-beta repeat domain containing protein, expressed
MLOC_59635 1 1399 bp None Available Available None





CDS Structure of MLOC_59636






CDS Structure of MLOC_59635






Contig Sequence (4101 bp)

>contig_43780 4101 assembly3_WGSMorex_rbca.fasta
CCTTCAAATCTCTCTTTACGGACTCTTCCCATGTCAAGTTCGGTCTACCCCTGCCTCTTT
TGACATTATCCGCACGCTTTAGCCGTCCGTTATGCATTGGAGCTTCTGGAGGCCTGCGCT
AAATATGACCAAACCATCTTAGACGATGTTGGACAAGCTTCTCTTCAATCGGCGCTACCC
CAACTCTATCTCTATCTCGTATATCATCATTCCGGACTCGGTCCTTCCTTGTGTGGCCAC
ATATCCATCTCAACATGTGCATCTCCGCCACACCCAACTGCTGCACATGTCGTCATTTAG
TTGGCCAACACTCAGCGCCATACAACATCATGGGTCGAACCACTGTCCTATAGAACTTGC
CGTTTAGCTTTTGTGGCACTCTCTTGTCACAGAGAATGCCAGAAGCTTGGCGCCANNNNA
TCCATCCAGCTTTAATTCAATGGTTCACATCTTCATCGATATCCCCATAAGAGTGGATAC
AAATAGAATACTGAATTATATAAGAGTGGTACTGGTTCAAATCCCAATGCTGCAGTGTGA
AAGCAGTTGAAAATACGAGTATAAAACTGAATGGTAGCCATGGGATCCTACCCACAATGA
TTGAGATGAAAGTTAAAGAGTATAAGTAGTAGTCTATTGATTCTGTATCGAGTATTATAT
CTATAAGACTATAACAAAGTAATCACCCCACTGACTAGAATTGTGCTCTCTGGCCATGCG
GATTTTGTTCTGAAAAAATCCATGCGGATTTTGTTCTGAAAAAATCCCTTCCGTGTTCCC
TTTTTCTTAATGTTGAATATTGATGTTTATGATACCTGATTCCGTTGACATGACTTGAGA
ACTTGCCCGCATAAAATAAATTGCGTTAGAAGGACTCAAAACCCCGCCCGCGTAGAATGA
GCCCGTGCGCATGAACTAGTCCACCTAGGTAATGCGGTGTTGATCCTTAAAAAAAAAGCT
AATGTGTTGTTTGAGAAAGGAAAGGAAGATAACCTTAAAAAAAAGCTAATGTGTTGTTTG
AGAAAGGAAAGGAAGATAACCTTTTATATTGGATAAACGAGTTTAGTAAAAAGCAGTTCA
ACCTACCTTGTGTCTAAAAACGTTTTAGTTATTCGTAACCGACTGGGCCACATGAATGTC
ATAATGGGCCTGCTCCTGGGCTTCCAGGATCAATGAAATATAGATGCATGAGTGGTGTAG
TCGAACTCAAGACCTCCGCTTCCGTACCTGGGGCTGTAGCCAACTAATCTAGCATGTGTT
TGTGATTGAAGAGAGATTCGTTTAATAAGTGGTCCCACCTCGCTCAATCACATCAATTTA
TATAGGCCGTGAGTTGTACAAGATACAGCCAGCCTCCTAAAAAATCAAGCTCGGTAAATT
GTGCGTGTGGCTGCACGTGACAATTAAAAAGCAGAGAGAAGACCTAAAATAAAAAGAGGA
GGATGTGCGCATAGCTAGGCTGGTAAGATGATCGGAAAGATGTACCCCATACACGGGGCT
CATGGGATGTGGATGCTTGCATGGCTGGGTTCTGTTGTTGTGGCTTCGAAAAATCAAAAT
ATTGTTAGTCTGGTGTACGATCCGCGAGGAAGCTAGCTACCTACATATGTCAAGCACCAA
AAAAGTCCGCAACACTAAGTTCGCCGGAATTTAACCCCTGACATGGACATCTTGCTCACA
TGGAGTGAAAATGCCAGCCCGTCGAGTCTGTCTGCCGCCACCGTCGTGTTTAGCATCATG
TCCATGCCGCCACCGGCAAGGCGTCCATGCCGTTTAGTGAAATGAGGGACGAATAAGGCG
CCACTTAGGTACTAGATTGGATAGAAGAAGTGCGTCCATGCCGTTTAGTGAAATGAGGGA
CGAATAAGGCGCCACTTAGGTACTACTCCCTCCGTTTCATAATATAAGTCTTTTTAGAGA
TTGCACTAGAGGACTAAATACGGATGTATATAGANNNNNNNNNNNNNNNNNATTCACTCA
TTTTACTTCGTATGTAGCCCCCTAGTAAAATCGCTTAAAAGANNNNNATTTAGGAACGGA
GGGAGTAGATTGGATAGAAGAAGTGCGTGTAGTGGCACACGGAACATGTTTTGTGAAATA
AGCGAGATCTAACACTTAGTGCTTATTCTGAATACATGCAAATTTTATTTTCCGGTACAA
CGCCTGGATGTTTTTGTTAGTTATTCTCAAGCGCAGTTTATATCGCAAAGCTGAAATCCA
GTGTGTGGAAGTCAAAGCATGATTTGTGTCGACCCCGCCTTTAGTATTTGTATAGTCTGC
ATGCTTGTTGTTCTATGGTTTGTAATTTCACATTGTTACATATCAAAAATAAGTTCCTCC
TTCCACTGTCATATGGTGTCGTGACATTCGTTATTCTGCTTTTTTTCAGCCTGCAACAAA
GGTCATCACGGCCCCGTCCACTGCGTCCGGTTTGCGCCTGTTGGCGAATCATACGCATCA
GGATCAGAAGACGGCACCATCCGGATCTGGCCGCTGAACCCCGCAAGCACCGATGATGCT
GAGGCGCCCACCGCCAACGGCAAACCAAAGGCAGCCGCGGTGGCAAACGAGGTCGCCCGT
AAAATCGAAGGCTTCCACATCAGCAAGGAGGGGCAGACCGAGGCGTAGGAGGGAGGATCG
CATCGTCACTGAACCTGGCAGTGTTTAAGCCTTGTTGGGGGTACTGCCGTTGCCGTCCGT
CAGAGCCGGTCCTGGTCTCATGGTGTCGCCCTCGGGTCCATCACGTCGAAGCTTCTTTGC
CGACCAAGGGCGGCGGACGATTCCGTCTGGCTCACGCCCGGACGGTGGATTTCTGTAAGG
GGTACTCTTCGGTAGACTGTTAAGATTAATGATAGCATCTAAGGAATCGGAATAAACCGA
AGGGGGAGAGCGAGTCCAGCAGTTAGTTTGTTTGCAGAGAGTAAAAACTTGATGTATCGC
CCGATAGCAGTCGCCACACAACAAATGTCAGTCGTGTCGACGCTGATTTCGCCCATCGTT
CTACGGCGGCGACGGCCGACGAGGAAGACTGCTTGCCCCAGTACGCTCTACAGCATAACC
TTCCGAACGACATTACGACAAGCATGCATGATCGTACGTTTGCCAATGGTTACTCTTGAG
TACTGCGGGGGTGCAGCACGGTAGTACTCCGTATCTTTCACGAAGACATGAAGTGGTGGC
GAGTTATGGCGTCGGCATTGACAGCCTGGTCTGGTTCGTCGCCCCGTATGTTGTGCGAGC
AGTCCCTTGGATCCGCCTCACGTGGTTTTACAGGGATATCCCGAGGCCGGTCTCTGCGTC
GCCATTTACGTCCCGCAATTACTCGCAGCGTCCTTCCTTCGGTCCTCCGCCCCCGCCGCA
CCGCAGCGTGCAGAGAGTCCGGCGGCTTCTGGCCCTGGCCGCCGCAGTGCACACTTGCCT
TCTCTGCCTGCCATCCCGCCCACATCTGCATGCATGCATCTCTAAAATTTACCACTAGCG
CACGATGTTCGTATATACGCGCATACACCTTCTCTGCCTGCCATCCCGTCCACATCTGCA
TGCATGCATCTCTAAAATTTACCACTAACACACGATTAATATTTTTTAACATATTACAGA
CGCAAGCGTTTATATATATACACGCATACATTCGCCCTTACGAAGGCATACACGTACATA
CACTTACCCCGTACGATCGATTTGACACGCGTGTTTATGATACATGGCCGATCGTCACGC
TGGGCCGGGGACGGGGAGCACAACCCGCCCCCAGAAACTGATGCTCCAGAACCAAACTGT
GTCAAACTGAACGTTGATGGTTCCTTCTCTCCGCTGGAGTCCTACGCGACCGCGCCGGAA
ATGCCATCCTCGGTCGCACTGCTTCTAGTATCACTCACGTTCGTCCAAGCTGTAATAATG
CAGGCCACCTGTTGGTACATTATGGTATAAAAATTTCAGGACCCAACAGCTGCTGCTTGT
TTGGGTTGGGGGCCCGGAGGGCATTGCTTAGAGCATCTCTAGTAGAACCCTCAAACTCTT
AAATGTAAAATCATTTTTAAGGGTTGAGAATTGCCCATTTTTAACACTTTTAAGGGTTGA
AAAACAGGGGCAAAGACTAGA