morexGenes - Barley RNA-seq Database

Contig contig_43776
Source Contig contig_43776
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_43776 (6477 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_43776

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_59632	2	4173 bp	MLOC_59632.2	Available	Available	LOC_Os09g19830.1, FRAME:+3, EVALUE:0.0, 13109.m01868 protein histone-lysine N-methyltransferase, putative, expressed
CDS Structure of MLOC_59632

Contig Sequence (6477 bp)

>contig_43776 6477 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGCCGCCGGCGCCCCCCGCGCGGACGCCGATCGGCGCGCGGCTGGTGGCCC
GCGGGGTCAGGCCGAGGAGGGTCTCCGCCAAGCGCTCCTGGCCGCCCGGCTGCGGCCGCT
TCCGCGCTGCTCCGCCTGCCCCCGAGGCCGGCGACGGCGAGAGGGGCGCCACCAATGGCG
TCGTCCAAGGCAGAGTGGATGAGGAGGCCAGCCACGCGGGCGTTTCCTCGGCGGCGGCCC
CTCCTCAACCGGATACCGAGGGGTTGGCGGAGGGGACGAAGGAGGTTGGAGATGCGATTG
ACGCTGGCGTTGTTTCATCTGCAGCGTGCAACGGCGACCTCCCTCACGCCCCGCCTCAGC
CGGAGACGATGCCGGAGGAGAGGAAGGAGGGCAGAGACACACACATGGACACCGCCGGTG
TTTCCTCCGCGGTGTGCAACGGTGACCTCCAGCACGCCCTGCCTCAGCCGGAGACTGAGT
GGATGGTGAAGCTGGGGAAGGAGGGAGGAGAGGCACACATCAACACTGCCGGTGTTCCCT
CCGCGGTGTGTGACGGTGATCTTCTGCACGCCCCGCCTCAGTTGGAGACCGAGGGGATGG
TGGAGGTGAGTAAGGAGGGTGGAGAGGCACACACGGACACTGCCGGTGTTCCCTCTGTGG
CTAGTAAGGACGATCCCCCGAACGCCCCGCTTCAGCCGGATACAAGCCGTGGGGATGCCC
GCGGTCAGGCAGAAAGCAGCGCGATCGACGTGATGCCGCTGGCGTTTGCTGCCCCGAAGA
GTTTTGATGTTGCTGCTGTCAATGGTTCCGTCGAGAATGGGGGAGATGGGGCCGAGTCAT
TGCTGATGAAGGGGAACCGAGACCTGGGGAGTGGTCGATTGGTCGGGGAGGAGGATGTGG
CTGGCAATGGCATAGTGATGGAGAACAGAGCGGGTAATGGTGAATTGGACAGAGAAGAGG
ATGGGCATGATACAGTGAGAAAGAAGAGGTGGTTGATGTCTGCTGTAAACCCGCCTCCCA
AGAAGAGGGCCATCTCAGCTGTACGCAAATTTCCACCTGGCTGTGGGAGATCTGCTGTTA
CTGGAACTGGCAGCAGAGTTGAGGAAGGGTTGGTATTGGAAGCCACGCCTACCAGTTTTG
CTGCCAGGGGTACCTCTGTAGTGGATGCCTTGACCACGGTTCCAGTTTCAGGTCATGGTG
CCTCTCCGGTGGTCATGCGAGATGCTTCTAATGAGGAGGTGCAAGGCAAAAGAACGGAGG
TCAAAGGGGTGGGTGATGGTGAGGTGAGAGGCAAATTCGAAGGAAGCTTGCGGGAACGTA
CTCCTAAGACTTATGCCAGAGGTCGTGTTGTTGATGCAAAGACAAAGGGGAAGCGACCAA
AGAGTGTCATGATAAATGATACATTGCTAGATGATGTTGGGGCCTCTGGAGACGGTGCAC
TGAGAAATAAGAATTCGGGCACTCAGAGAGATGATATGCGCTCAAATAGTAACATGAAGC
AGGGTGTTGTGAAGATGAAGAGTAATGACATAGGCGATGACTCTTTGATTAGGTCTTCTA
AGGAGCCGGGGTGTGAAAATCATGTTATGGCCGATCAAAGGGAAGAAACCAATGATTTGA
CCTTCATTAGTGATAGGCTAATCGTACAAGCATTGATGGCTCCGGACAAATGCCCGTGGA
CAAAAGGAAGGAAGTCTATTGGTAGTGCTTCCAACTCTCTTACTCCTAGGAACAAGTCTC
TTCCTCCTAAGAAGCCGAAGAAAAAGGACGCTACTCCAAGGAAAGATTTACCCCCCAAAG
TGACACCTTCTACATCGACAATGCACGAGAAAATTGAGCACGGAGATTTCTTGGAAGATG
ATGACAAATCTATGGCATTACTTGTGCCTGAAAGGAAAGAATTGTGTGTCACGCTCCCTC
CTTGTGCTCCTTTTGGGGACCAGAGTGTTGATGCTCGGAGCAAAGTTAGGAAGTTGCTCA
AGTTGTTCCAGTTGATATGTCGGAAGCTTATGCAAGCCGAGGAACAACATATACGTAATG
TTGGAAGAATTGACCTTGAGGCCGTTGAAGTTCTAAAGAAGTATGATGGATATTCTAAAC
CCGAGGCTATCGTGGGCGATGTTCCCGGTGTTGTTGTTGGTGATGAATTTCATTTTAGAG
TTGAGTTATCGATAGTCGGACTACATCGACTTTATCAAGGAGGCATTGACTCTGCCATTG
TGGATGGTACCCGCATTGCAATAAGCATCGTCGCTTCCGGTGGGTATCCCGATGAGTTGT
CTAGCTCGGACGAGTTAATATATACCGGCTCCGGAGGTAAGGCCACCGGCAAGAAGGAGG
CAGAGGATCAAAAGCTTAAGGGTGGTAATCTTGCCATGAAGAATTGCATCAAAACTAAGA
CTCCGGTCCGAGTGATTCATGGGTTCAAAGGTCAAAGTAGAAGTGAAGTCGGGCATTCTA
AATCCAAGCAAATATCAACATACACTTATGATGGGTTGTATGTGGTGGTGGATTGTTGGC
AAGAAGGAGCAAGTGGCTCGATGGTCTTCAAGTACAAGTTAAAAAGGATCCCGGGTCAAC
CTGAATTAGCTTTACACATAGTCAGGGAGACAAGGATGTCTAAAGTTCGTAAAGGTCTTC
GCTGTCCTGATATATCTCTAGAGAAAGAAAGGATTCCCATATGCGTGATCAACACAATTG
ATGACATGCAGCCAACACCATTTGAGTATATCACCAAAGTCATATATCCACCGTCATATG
CAAAAGAACCTCCGCAAGGCTGTGATTGCACTGACGGTTGCTCGGATTCTAGTAGATGTG
CTTGTGCAGTGAAGAATGGAGGAGAAATCCCGTTCAATTTTAATGGTGCAATTGTTCACG
CAAAACCGCTCATATATGAGTGTGGCCCATCTTGCAGGTATGGTGTTAATTTTTTGTAAC
TTAACATAACCTAACTAGAGAATAGCCAAGTTTATTTTAATCTGATCTTTAGATTTAAGA
ATTGAATTTGCAGAACCTGGAAATGTTTCTTGTTGTTACTCATTGGCTAGATGTCGGTCT
TAGATGTTCAGTCCGAGATGTCGGTGAAATACGAGAAATGGCTCATAAACCAAACTTTTT
TTACTTGAAGTTGGCTCAAAAACCTAACTTGTTCACCAGAATTTGGTATTGGCAGTATTC
TTTCGCATTGGACATTTAGGTTAACTTGGAGTCACAAAATTTCATTGAAATTAGTGAGCT
AACTAAATGCTGAAAACTGCATGCAGGTGCCCTCCAACATGCCACAATAGGGTGAGCCAG
CATGGTACCAAAATTCCGCTGGAAATATTCAAGACTGGGGAGACAGGTTGGGGTGTAAGA
TCTCTCAGTTCTATCTCTTCAGGCAGTTTCATATGTGAGTATGCAGGTGAGCTATTGCAA
GATACAGAAGCTGAAAAGAGAGAGAACGATGAGTACCTGTTTGATATTGGTCATAACTAT
GATGATGAAGAACTTTGGAAGGGGCTTCCATCGATGATTCCAGGTTTAGAATCTTCTACC
TCTGAGACAATAGAGGAGGCTGTGGGCTTCACAATAGATGCTGCGAAGTGCGGTAACGTT
GGAAGATTCATCAACCATAGCTGCTCCCCAAACCTGTATGCACAAAATGTCCTCTGGGAC
CATGATGACAAGAGGATGCCACACATTATGTTTTTTGCTGCCGAGAACATTCCTCCGCTT
CAAGAGCTGACTTACCACTACAATTATACAATAGGTCAAGTCCGTGACAAGAATGGTGTG
GAGAAGGTGAAAGAGTGCTTGTGTGGTGCGGCTGATTGCTGTCACAGGCTTTACTAAGTT
GTTGGTTTTCGGTGATTGGTGATGTTAATGTTCATACTCAATGGAAATCAGTCCTATAAT
GGCAGTGCTCACTCGCTTTACCCTTCTGGCTACCTTGCACTCGTTGCCGACATGTAGTGT
TTATTTTTTGTGCCAGTTGAACTGTTACTTGTTACTGCGTTTTGAAGAACATATAAGCTC
CAATTGCTCACCTTTTTTGGTGTTTGGGAGACTTTGAAATAGTATGAAATATCCAGGTAC
GTTTTACTCTCTTACTTTTTTCGAAATAAAATTGTACTGGCTATGACATGAGGTTTGACT
GTTGGTCTTTGTTATGACAAATTCTGCAGAATCAAGCATTTTGGCTTGTTGAAATCTTCA
CATGGACCTGGAGGATACAAATATGCAATGATTAGCTTGTTTAGAGCTTTGCACTGAACA
TGTTACTAGTAGGAGTGTAGGACTAAAGATGGTGGCTACAAGTGCCCAGAGTTGCGTCGA
CTTCCCGTTGCGATTGCTTCTGCACAAGGAATGCCCCGCATCATTTTGCTCAAGTGTGAT
CGCAAGGCTGTAGCAAGCTGGCGATTGAAGTTGTTGATTCATATCCTTTTTTTTGTCTTT
ATAAAAATGAATTTTGTGGATCCAATAGATCTTAAAGAGTTGCAGCTCGTCCTGCCTGTA
AATTTTCCAGTGTTAGTTTGGACCATTATATAGGCTTGCTGGAGATGTTTTTCAGATGCT
ACCATGCATCTTCAGGAATTATAGAACATATCTACTGTTTCCACATGTGTTTGTTTTCTT
CTATTTGTTCTTTTATAAGCCATGTTGCGAGATGAACATTGCTTTTTCTTTGTACTCCCT
CCCTCCCAAATTTATTATCTTGGACTTGTCTAGATATGGATGCATCTAGTCACGTTTTAG
TATCTAGATGCATTCATATCTAGGAAAATCTAAGACAAGAATTTTGGGACGGAGGGAGTA
GTAGGTAAGAAACGAACCATGCGAAGAACTATGAAAAGGAAAAAATATAGCAATAGTTTT
AGTCTTTGTCGCAGTAAGTAAATACTTCGTCCGTTCCTAAATACTCCCTCCGTCCAAAAT
TACTTGTCCTAAAAATGAATAAAATAGATGTATCTATAACTAAAATAAGTCTAGATACAT
TCATTTGTAGGACAAGTATTTCCGGACGGAGGGAGTATATGTTTTTCTTAGAGGTTTCAT
TTGTAGACTACATTCGGATGTATATAGACATATTTTAAAATATAAATTCATTCATTTTGT
TTCGTATGTAGTCTTCTAGTGAAATCTTTAAAAAAACTTATACTTCCTCGTCCCAAAATT
TTTGTCTTATATTTGTTTAGAAATGGATGTATCTAAATACTAATACATGATGACTAGATA
CGTTTATATCTAGACAAATCAAAGACAAAAGTTTTAGGACGGGGGAGTATTTAGGAACGG
AGGGAGTACATAATTAGGAATATGGAAAAAGACAAATCATCTTTCTTTCTTTTTAGTAGG
TAAATATATATATTTCATAAAACAAAAAAAATAAAAATTATATATATTGTATAGTTAAAA
ATATTTATATTGAATAAAAGTGACATAATATAAAGAAGACTTTGTTCCATACATGTTGTG
AAGGGCCTTTGATGAGGTAGACGTTGAGATAATAAAAGTTGTTGGGATCACTTTTTTTCT
TCTTCAAAATCACTTTTTTAGGGACTTAAAAATCACCTCTATTATTCTATTCATTATTGC
ATAATGTTCTGGGGATATAAATAATAGGCAGTCTGCAGACATGACGGATGTTTGGGACTG
AAAGGCTTGGTTGTTGTTGTTGTTGTTGTGCAGACATGACGGCCTGCTCCCAAACCGGTC
ACTGCTTATTTTTTTATCAAGTTTGGGTAGCAAACCATGTTTTCCACGTGGTATCTAGTC
GCTGCTTTAGCGAAACTATGAGCTTCAAAATTACAATTTCTACTCTCACGAGACAATGAA
GCTCATACTCCCTTGGCCTTGTTGCATTCGAACAAAAAATGTCGCCAGGAATCCGCAGCT
GAGCTGCATACCTTAAAAATATCTGAGTCCATTATGTTTCAATGTGCTCTAAAATCTGCT
GTAAGCAATGATATTTTTGCTAACCGCCAAACAAACACCTTCATCTTGGAGGGAACATCA
ATACTCCAAAGTTTGGCCCAACTTCAACATGGCACCCAAAGGGTTTGGATATGGATACTA
TGTGTCTAAACCCATACCAATCTCAAAAAATTGTCCATACCCGTACCTATACCCGCACCC
TGGGTTTCAAACTGTTTCCATATCCGTACCCGGCCGGGTGTGGGTAATACCCGCGGGTAA
AAATATCCGTGTATATTTCAACATTTTGACACATAAGCATTTCAACACATATATACATCA
TTTCGTCACCAATATAGAACATTTCAACACATAGGTTTTAACATTGCAGTATATATATAC
AACATTTCAACACATTTCTACAACATTCTAACCACATTTATACAATATTTCAACACATTT
ATATAACATTTCAGCATATATGCACAATATTTCAGCACATGACACACAAGTAGGGGGTGG
CGCATTTTGGATCAGGAATTCGAAGAGTGAGGGCGTGGCTGTTGGAAATATGCCCTA