Contig Data
morexGenes
Links



Map Locations of contig_43754 (6249 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43754

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59603 4 1329 bp AK372286 Available Available None





CDS Structure of MLOC_59603






Contig Sequence (6249 bp)

>contig_43754 6249 assembly3_WGSMorex_rbca.fasta
TGACCACCTACACCGCCTGGTACATCGCCGTCGCCTCCCTCATGCACGGCCAGGCCGACG
GCGTCAAGCACTCCGGCCCCACCACCATCATGCTCTACTTCACCGGGGCCACCAACATCC
TCTATACCTTCGGGGGCCACGCTGTCACCGTGTAAGCCGACACGACCCACTTGCTTGCCT
TGCCTTTTTCACCGCACTAATCTTTCTCCGAAGTTATTAGTGATGATCTACGTTACTAGT
TTAAGTAGCCATGGCATCGGCATGCAATGTAACGGTCACTGGCCACGGAGCGCGCACGCT
ACTAGAGTAGCTACCCAGCTCGGGGTCACGTGCAACTGGAATGCCCCTCTGACATGCGGG
GTCGATCGCCGTCGTGTATGCTATGCAACGGCCGTCACTTGGGGACCACCTAGACCTAGA
CATGCACGCACGGTGCCCATATGGCCATATGCATGCACGCACGCAGTATATCCCAAGAAC
ACACACGTGCTACCCACACGACATCAACCGAGCACAAATGCTCGTGCATGGTGGAGCGGA
CCGTGCGTATACGTTTCCAAATTTTCAACATAAACAAAGTCGAAACCTGAGCTAGCAAGA
TAATATATATATCTAGAGTTCTTACCCCAAAAAATCAATTTAGGATTCATATTTGTGGTA
CCACTAGCCAGCTTGTAGGTTATTCGTTTAAACTTTTCCGTACTCATATACCAACAGTGT
TATTGTGGTAGCCAGTACGTACTACAAGTAGCTGGTACGTAGGTTTAGCACAAGATTATT
CGTTCGCGCTTTTTCGTACCAACAGTGCTCACGTTGGAGTCTGGAGCATCATCAGGCATC
TGCAAAGAAACACACACACTGTTTCGGACAGCAGAAGAGAAGCGAGTGGTACTAATACTA
CAAAGTGCTGAATGCAAGCAAAACTAGCCGAGTACCGCTGCCGCTGCCGCTGCAAAGCGC
TGGACCTTTGGCTTTGAGGCTTTGTTTGAAGCCTCCCCTGCTTTTTTCACCACAGCTAGC
TCTGCATGCATGCGCATTTGCATTTCCATCTCTTGTGACCATTGCATGCCTGATACATCA
GCTAGGTACGTAGGCCCACTTGCTGTAGCGTAGATAACGAGCCGTCCACGACACCCGGGC
CCCGTCGTCATGTCTGTGCCGCCTTGTCACGGCAAAGCCCAACCACGTCCATGTCCATCT
CCATCTCGCTTTGTTCGTGCCGTGGCAGACTACTGTGCATGCGTGGTGCATCGCTAATGA
AGTTCATTTGCACGAACCTTAGAACACGCGGGCAGCTAATCTGATGCATGTTTGTGTGTG
TTTGTGTGTGTGCAGGGAGGTGATGCACGCGATGTGGCGGCCGCAGAAGTTCAAGGCGAT
CTACCTGCTGGCGACGCTGTACGTGCTCACGCTGACGCTGCCGTCGGCGTCGGCGGCGTA
CTGGGCGTTCGGCGACGAGCTGCTCACGCACTCCAACGCGCTCTCGCTGCTCCCGCGCGA
CGCCTGGCGCGACGCCGCCGTCATCCTCATGCTCATCCACCAGTTCATCACCTTCGGCTT
CGCCTGCACCCCGCTCTACTTCGTGTGGGAGAAGCTCATCGGCCTCCACGACTGCCGCAG
CCTCTGCAAGCGCGCCGCCGCCAGGCTCCCCGTCGTCGTCCCCATCTGGTTCCTCGCCAT
CATCTTCCCCTTCTTCGGCCCCATCAACTCCGCCGTCGGCTCGCTCCTCGTCAGCTTCAC
CGTCTACATCATCCCCGCCATGGCGCACATGGTCACCTTCCGCTCACCACAGTCCCGCCA
GGTTCGTCTCCTATTTCCAACCAACTAGCTACTACACATATTAATAGTTATTACCCTTTG
CTTGTGCTATCACTTTATTTTTCTAATAATCTAAACACTGTGCTATGAGATGTTGATGGA
CTGATCTAGACGCCGGTGAGATTTATCGACATGCATGCATGGGTTTTTGTTTGTGCATGG
CTACACGTCTGGGCTCCATGCTGCATACAGCTGCTCCAGGAGCAGCTAGCTAGCTAGTCG
CCATTGTTGCAGTCTTGCAGATGATGTAGCTAGCTGGGAACAGTGAATCTGCAAGCTCAC
AGTGTAAACTGTGAACACTAGGGGGACATGACCTGTCACTCGTAGAAACGACTAGCCTCC
TTCACAAGGTGCATGCACAATTGCTGGCTCGTCAGTGCCTGATACGTTTCTCGATCAGTT
AACTGGTGCCACAAAAACATTCGATTAAAAATATACTCCCTCTAAACCCAAAATTCTTGT
CTTAAATTTGTCTACATATAAATGTATCTACTCACGTTTTAGTATTTACATACATTCATT
TTTAGATAAACTTAAGACAAGAATTTTGGAAGGAATGGAGTAGTAGTTTGAGTAGTAGTA
CTGTGTACTCCACTCCGTTGGAGTATGTATTGTCTGCGTATCTGCTGCTCGTGCTGCTGT
ATGTTATGATGTCTCGCTGAATGCAAGACAAAACCGCAGCATGCATCCAGCTAGCTTAGC
AGTGAAGTGATCGAGTGTCAGCACCAGCGATGATAATTTCAAAAAAAGTACGTCCACCAC
TCACCGTCGTGCACAGTAGCGCAAAGTTGAGGGAAAAGTGCGGTGAAATGCGAGCGTGGT
TTTGTATCATCTGCTGTCGGGGAGCCATTGGCATCGATCGATGGATGGAGCACGCAGCAG
GCGCGCAGTCTGCACATAATTCTGTCCGGACACCGATGCCGCCATGCCATGTCTAGAAAG
CAACAAAAGCAGCAGCAGCAGTGGTGGAGTAGAGTAGTCCGCCACTTGAGCGCTTGGGGC
TCTCAGCTCCACGCACCAGATGCCCCCTGCACCTGTGACATCATTATGAGTACCATTTTC
GCATCGATCTCATGCCATTTTGTCATGGCACATACTGTAAGAATTTATCTTTGTCTAACG
AGGGATGCAAAATGCAGAATGCGGTGGAGCGGCCCCCGCGGTTCGCCGGAGGCTGGACGG
GGGCGTACGTGATCAACTCGTTCGTGGTGGCATGGGTGCTCGTCGTCGGCTTCGGCTTCG
GCGGATGGGCCAGCATCACCAACTTCGTGCAGCAGGTGTCCACCTTCGGCCTCTTCGCCA
AGTGCTACCAGTGCCCGCCCCACCCGGCCGTCGCCTCGCCGCTGCCACTCGCCCCGAGCC
CGTCCATGCCGTTCGGCTTCAACATGACCGGCATGTTCGCCCCGATGTCCGCCCCGTCTC
CGTCTCCGGCGCCGGCACCAGCGCCGATGCATTTCGGGTCCCTTCACCACCACCACCGGC
ACCATCGCCACGGTCTCTAGTCGATCGGAAGGACGACGCGCACGACGGATGGTTCGATAA
ACCGGCCGGAGCTCCATCTACCTAGTTTCTAGCTAGCTAGTTTAATCAGCAGTGTTACTT
GGATTAGCCCCTAGTAGTGAAATCTCTTGTGTTGTTGTGCCTCTCTTGTTCTTCTTGTGC
TGGTGGCAGCATGGCTTGCTATTAGTCGGCAGCTAGTGCGAGGTGGCCTTAGCTGCTGCC
CTGTGTGTGGAGCTGCTTTTCAGGCAGGAAGAAGAACTAATGTAACCCGAAGGAGGGAGA
TGCTCCTGCTCCTGCAAGTTTTTCTCAATAATAAATTCACGCCTATTGCTGCCTGTTTGA
TTCGTGAAGGAACCGGAGTGCTGTTGTTGTCGGGTACATTTTAAAGTGCTGTTGTTCTTG
GATGGAAATTTTGCTGAATGAAAAAGCTATAGGCGTGCATTTTCGAATGAAAAACTCAAG
CAAACACACGCACGCGGGACACAGATTGGATAACAGCAGCCTCGTGTCGTGCCTGCATTC
TCAATTTTCAGTCTAGGGTTTCCATGCGCGCGCCCACACACACTCTGTGATAGGGCGCCC
TGCAGCGTGTCAAGTGTAATCCCGTTTGTGACATGGCTAAAGACATCCCAACAGTTGTAA
GATAATTGTTGATAAACTTTGCCATCTAAGATATATGATGATGTGACAACAAATAAATAA
AAAAAGAAAAGAACGTTGTATGTACATTAACCAACAGCTCTTGCACAAGCTCCAAAGTTA
CATAGAAACCAATTGCATTTATTCCCTCTTTATTAAATAATTTAGATGCAACCATTGAAG
TAGTTGTATGATCCCTTATTGGTTGATGACATGAACAATTTTATCAACAAGACTACATAC
AGACTGCTGAAGATACTCTAAGTCCACGTGGTTTCACTTTGCTATGCGGCTATGCCTATG
GGCACTCACGGTTTTCATCCTAGACATGCCTTTTGTTCACAATGGCATTTACTTTGGGTA
ATCATGCACAATGTCAATGTAAATAATCACCGGTTAACGTCGGCGGTGGGTGAGTGATGT
TGAAGTTATGTCATGGTTGTAGTAGTCGGCTCTTCTTCAGGGTCCATGGGTTCGTCTCGG
GTTATTCGTTGGTGCAAAGTTGAACCTACAACGGCGGGTCCGAGTGGCAACCATGACGAG
TCCCAAGTGGCACCGATGTGAACTTCCATGTTGCCAGCCTTGCGTATTTTTTCTTGTAGG
TCTCCTTCGGAATCAAAGTTTATGATGTCCCCATCGCGGGCGGTTGATTGATTGGCGTGG
AGTTTCGTGTGGCTTCACTCAACCACTTTGGAGTGGGCTCAGTTTCATCTACGGTGAGGT
AGAGTCACTTGCTCATAGAGAAGGGATGTGATGATGTCGGCTTGGGGAGAAGTGATGACG
ACAATGTCTTTTGGGTTACCACGGCGAGGCTTTATTCACATTGGCATGTGAGGAATATCT
TGTGTGTGGCACTCTGAAAATTATGTCATTTTCCATCCAATTTTCCGTGAATAGAAAAAT
TGTTCTTAATTAATGGATGCAACAAATATTTTGTCTCTATTTATCATTAAATACATATAT
GGTCTAAAAAAAATAGAAAAAGATATGATAGTTAATAGTTATGCAAGTGATGACGATTTC
ACATTTCATAATAAAAAAATGTTGCTTACAATTGTCTTAGCAATGAGTGACTCCACATCA
TAAGGCCAAATAGGTAATTGTACTCCACTCATGTGTTCTCCGCCAGTTGGGCTCACTTCA
AGAAAGCCCACCCAAAATGGGGCTTTGCGGTTGAATTGTGTGTTCTCAGCATGTTGGGCC
CTCTTTGGGTGCCTTAACGCATGTGTGCTGAGAGGAGGTATACGTATCTTACTGGCATAT
ATAGTGCAAGTAAACCTGAAATGGGACTTTGTGGTTCACTCATGTATTAATTTTCTACCT
GTTGTGCCAATTATCACTGCCCGAACATGTGTGTGCTAGGGAACGTGTAGGTGTCTTTCC
TGGCTCGGCATTAGTCTAACCAAAATGGTTTTTTGTGGTTGGCTCATGTGTTTTCTGCAT
GTTGGTTCTATTGTCGGTGATCGAACATGTGTATGTTGGCCGGCATGGCAAGGTATATGT
ATCTTTCCTAGCTTGGCGTAAGCCCACGTAAAATGAGGCTATGTGGTTCACTCCCATGGT
TTTCACCTGTTGGGCCTAGTTAGCTTGCCTCAACACCAAGTTGCCCCATGGGAACCATAT
GTGGAGCAAATCGTCTAGCTAACTGAGTCCAATAGGGACGCCAAAGTAACCATGGCATGA
TTACACGGGTCTAAACATCTCGACTTCGGTGTCGTAGGCCTTGACTGTTTTTATGAGAGC
GAGCACCCATAGAATTGCGCTCACCCCGCGTGTTATCCTTTCGTGGTGTCATGAAACATT
CGCAATAGGTAGGTTCACCTCATCTTAGTCAATGACCAAAGCTCATTCAACATTATTACA
ACAAGGACCCACGATCATCCAACTGATCTCAAAATAGTCATACCCGGGGTGACCCATGAT
CCAACAGGCTAGATCACTTGCCCTAGCATATTTGGTCATTGAGAGAATTATTGAAGGGTG
TGTTGGGGAACGTAGTAATTTCAAAAATTTCCTACGCCACACAAGGATCTATNNATGGAG
AAACCAACAACGAGCAATGGATTATTGCATCTTCATACCTTTGAAGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNATGGAGTCGTACACGCAGCGATTCAGATCACAGTGGATTC
CGTCTATGCACCGAATGACGATGCCTCCGCGTTCAACACACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGCAAGGAGGGAGGAGAGGTTGATGGAGAACTCTGACAGCACGAC
GGCGTGGTG