| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_43723
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59568 |
2 |
1631 bp |
MLOC_59568.2 |
Available |
Available |
LOC_Os07g46840.1, FRAME:+3, EVALUE:9e-118, 13107.m04961 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
CDS Structure of MLOC_59568
Contig Sequence (6389 bp)
>contig_43723 6389 assembly3_WGSMorex_rbca.fasta
GACTAGCAAACATGTTGATGTGGCAAGTACTTAAAGAAGAGAGAGGGGGTTAGAGTAACA
TAGGTAGATACAGTATCATGTTAAATGCTATGCTACTATGTGTCATGCATACCAATAAAT
GAGACCATCTATAATACTAATTTATGATACTATGCANTATGAAGATAGTATCATACAATA
GTATCATACTATATGTTACTCCCCACTATGAGCAGCTTCAAAGTAACAATGCCGCCATGC
CATAGGCCTCGCAACGTCGGTCTCGCTCGCTTCCACCCCCACACCTCATGTGACCGTCTC
CTATAATCGTTGTCTCTTGCTGTGGTCGGTTGGTCGGTGCCAAGCCGCAATGGTCGATTG
AAGGCGACCCGAGGCATCAGCACGGTGTACCAATCGCTTAGACAATGGATTGCAAAACTT
AGACCGCCAGTTTGACCATTCAGTGTTGGCTTTCACAAGAACCGAAAAAAATCACAGATT
TCAAAATAGTTCATATAAAATTAAAAAAATCACAAATTTGAATAATTTCATAAATTAGAA
AAGTTTGGGAATTTGAAAAAAGTGCACAAATTATGAAAAAAGTTCATAAATTTGAAAATA
GATCATGAATGTGAAAACCTTAACCAATATTTTTAGTGAATTTGAAGAAAGATCATAAAT
TATAAAAAAAATCAAAATTTTGGAAATAGTTCATAGATTTGCAAAAGGTACGCGAATTTG
TTTTTTTATGAATTTGACAAAAAAAACTATGCATTTGAAATTGTTCATGATTTTCGATAA
AGGTCGCTAACTTACAAAAATTCATGAAATTTAAATAACAAAAGAAAAAAAGGAGAAAAA
ACCCGACAAAGCCGAAAAGGACAAAAAACCCAAAGAAAATCAGCTTTGGAGGGAAGCTTG
TAGATGATTCCAAAAATGGGTGCTGAAGAAAAAATCAGCGGGGTGTGACCCCTGTACAGA
TTGTCCTCTATTTGACGCTAGAAGCGGCACATAGGATATAGTTGATCTTCTTATGGCTAC
TCGTCCAATCCTTAAGCGCCAGTAAACAATCCTGCTCTCCCGCCTCACTCAGCTGGGCTA
GGCTTAACAAAGGCAACGCCACCAAATCACTCGAGTCGCAGCCTCGCAGGTTTTGATGGC
TGACCGGTCAACCTTTGGACATAAAACACAAATCCTATTTTTTTTAAACAAATAGAAAAC
ACAAAATAAAAAATCATGGATTTGAAAAGGTTCATAGATTTACAAAATAGTTCATGAATA
TGAAGAATTTCAAATTTTGAAAATGTTCATGAATTATAAAATGATCCTGGATGTTGATAT
AAATGACGGGTTTTAAAAAAATATCAATATATTAGAATTTATTCATGCAGATGACAAAAT
TCACGACTTAAAAAAGGTTCATGAATTAGAAAAATGTTCAGAAATTTGAAAAAGTTAACA
AAATCAAAAATAATATCATGCTTTGAAAAAGGTTTGCAATTTCAAAAGTTCCCTTGAGTT
TGAAAAAAGTTCATGAATTTGATATTTTCTACCAAATTTCATAATAAATTCACAATTTTG
AGGGGGAAAAATCAACAATCTTGAAAAAATACATGAATTTAAAAAAGGTTCACGAACGTG
AGAAAAGTTGACAAATTTGGAAAAAATTCACGCATTTTAAGAAATAAAATGTAAAAAAAA
GGAAAATGAAAATGTAAAAACCGAGTAACAACAAGAAAACCAAAACACGTGTTTTATCCT
AGGTTTTTGAAAAACCTAGATAGACATCTTCTTCCAATTCGTGTTACCATGCATCCAAGA
TCCACAGCTCGGGACCCCCTACCTTGAGGTCAGCTGGTTTTCACACTCACAACAACGACT
CTTATATGTGCCGACCCATTAGGACTGAGGTGAGCGAAGGGGCTCCAGTTATAAGTAACC
CTTTATTTGGCGCTTTAGGCGGCAAATACGGTCTCGGGTCCGTCTTCCTTGCATTCCCCT
CCACAGTTTCTTTGGCTTTCAGTAGTCAATCCATCTTAAAATACTTGAAAGAATATGTTC
TGCTAAAGAGAACTGTATGACCAATAATTAGTCTACGTGTATATTTTATGTGATGTAGAA
TGGATATCATTAGATTCATATTGTAAAGAACATATTTATGCTTGCGACATTGTGTCTTTA
AAATCACAGATTGGTAATGGTGTAATTATTGTCAAAGACTTGTCCCTGAAACCTAATATG
TATAGTAAATATGAAATGTAGGAATAGTAGAACCAGCCCACCAGAGTTGTTGTCCTAACT
TAACACATTATTTTAAAACATTGAAGAGATTTCTACTTCCTGATCTCTGCACCAATTAAA
AATGCATACAATTATTTTAATATAAACACCAAGATAAACATGATTTTCGGGATTTCTTTA
ATAAGTACAAGATTTTTCTTGATGAATGGCTTCATCACACATCAAACTTGATTCTTAATA
AATAAAGAAAAGCCCATGTTCATCACTTCTCAAGTCTAAAAATTGGACACGGATCGTATA
GCTGCACAACCACGTGCCAAACCACTATGAAATTTTGTGTGCATTCATGCATTCATAAGT
ATGACTCTGTGTTTGTATATGCGAGCATATGTGATTGTATTGTGTTAAATAAACATAAAC
CGGGATCAGGCTATATCGCTCTATATAGTCCTAGACAATAGAAAAATGTTCAGCAACTAA
CGATAGTTCGATACCTTTAGCGATAATACATAGTATCATTTTAATGAGACCATAATCAGC
TAGCTGATCCGGGTCACATGATATTGTGTAAGGGCATCTGTAAAGTCGACCCGCAAATCT
CTCTATGTGTTATGATCACGTTTGTTCGGACTTTAAAAGTCATTCAACACAGTTTTATAG
TTCGCACACGTGACCACGCCCCGCTTTTGACAATTCTGACCCACCGAAACCATTCCTCAC
TCGCGCGCGCGCCTTCCCATCCAGCGCCAGCTGACCGCATTCATATCCCTGTAAAACAAA
CCGAAACTTGGGACGAAAACTTGGAACGGAGGCAACCTCATACTGCCTTCACCATTGAAG
CACCGCACCGGTCGAGGGCGTTGCCCACTGCATGCCCAGTTGCACATGCCTCCTCGCCGC
ATTCAAATGCATCCACTAAACCCGTGTGGAAGCCGAGGAACCTACCCCGACCACACATTT
GTTCATGAACAGGCCGGCATTAAACGCAACGTCGGGCAAACTCCTCTTGTACATCTTTCA
TTTAAACGAGGTCAAACACCTCGCAAGAATCGCACCACCAACTCTGCTCTCCATCTCCTC
CTTCTCCACCCGTTCGATGCAATCTGACAAGCAGGACGAGCAGTTCTCTAGAGTAAAAGC
CATCTGGATGGCCCATCGAGCCCATCGGATGCAAGCGAGGCAGCTCGCTGCTGCACCTCC
CGCGCTTGACCCGACGAAGCAAGGTGTCGTCCCAAGCCGGTGCATGGTTCAACAACTCAC
CGCTCGAAGCCAGCTCGCGAAGGAGTAGCTAGTTGCTGCAGGCCGGTACCGCTGGGAGCA
CGGCGACACGAGCATTGTCGCAGCCGTTGACGCCCTGCTGGTAGAGAAAGAAGCCATCTG
CATATAGATCAACGAGTCAGTGGCCGGCGCGTGCACGTTCGTCGTTAACATCGAGGGAAA
GTAGAACACGGGAGGCCACCACAACTTGTCTCACATGTAGGCCATCGCCGACGCGTCCCC
AGCTTGTACTGACCTGCCCAGTTCTTTATCTTAAACCAACGACGGCCCTTGTCTGGGCTC
CACGGAAGTGGAGGAACCCCCTTCCCCTCTGGCCGAAGCATCAGTTGGCGATTACATTCC
AATGAGCGGTGGAGTGTATGTGTATCGTTCGAGTGCGGCTGTTTTTTTAGTTTAAATATA
TTCAATATGTAAACGTTTTCATCCTTTTACATGAAATTCATTATGTTTATATGAAATCCA
ACCATGGTTGAATGAATCTTATCCATTATGTTCAAACTCTTATCAATTAAAATGTATACA
ACCAGAGTTGAATGACAGTCTTTCGAATCCGTGTCCATGGACGGATACATTAGGAAATTT
GCGGGTGGCTTGGAGATGGTAGCGTCCAAAACAGCACCCCACTGAACGGTGGAACAATCA
TCACAAACAGGTCTGACTTTATGCCTCCCACATTCATACCTATGCTGCTGGGTGTCCGCA
TGCACCATGCGAGAAGATAAACAAATGGCATGAAGTTGAATTCCCCGCCAAAAAAATATG
ATGCCAGGAAAACGACGTCCTTTTCTAGACATAGCCGATCGAGCTCCAGGCTGCTCTGCT
ACATATCTCATCGATCACCAGCGCGCGCTCTTTCGATTATCCATGGTCATAAGCATCTGG
TCTAGTCAAATCTAGCTCGGTCACGCGGCACCAGACGGGGCAGGATGTTCGGAGCAGTGA
AGCATGCCGTCGTCTTGGCGAAGAATAGCCGACCCGTGTCTGCCTTCGCGAGCCACTTCT
CCGCGGCTTCCACCTCGCAGAGGTGCTGGTCATCTGGTGATCTTAGCTTATGTTCTCGCT
TACGAACAGATCATGGAAGGTCGTCCCAAAGGTGTTTGTGGGTTTGATTCATTTGTAGGT
TGGCCGGGAAGGTGGCCGTGATCACCGGCGGCGCGAGCGGCATCGGCAAGGCGACGGCCG
CGGAGTTCGTCAGGAACGGCGCCAAGGTCGTCCTCGCCGACGTCCAGGACGACCTCGGCC
ACGCCGTCGCCTCCGAGCTCGGCCATGATTCCGCATGCTACACGCGCTGCGACGTGACCG
ACGAGGCGCAGGTCGCCGCGGCCGTCGACCTCGCCGTGGCGCGGCATGGCCGCCTCGACG
TCATGTTCAACAACGCCGGCATCAGCGGCACCCTAACGCCCGTCCCCCTCGGCTCCCTGG
ACCTCGCCGACTTCGACCGCGTCATGGCCGTCAACGCGCGGGCCGTGCTCGCCGGCGTCA
AGCACGCCGCGCGCGTCATGGTCCCCAACCGCCGTGGGAGCATCATCTGCACGGCCAGCA
CCGCGGCGGTGCTGGGAGGCGTGGCGTTCCCGGCGTACAGCATGTCGAAGGCTGCGGTGG
TGGGCCTCGTGCGCGCCGTGGCCGGGGAGATGGCGCGCGCCGGGGTGCGCGTGAACGCCA
TCTCGCCCAACTACATCCCGACGCCGATGGTGATGCGGTACATAGCCGAGTCCTACCCCG
GGACGAGCGCCGAGGAGCGCAGGCGGATCGTGGAGAGGGACATGAATGAGATGGACGGCC
CGGCGCTCGCGGCGGAGGACGTCGCCCGCGCGGCAGTGTACTTGGCGTCCGACGAGGCCG
GGTACGTGAACGGGCATAACCTCGTCGTCGACGGCGGGTTCACGGTCGGCAAGGTGCCGA
AAATGCCGGCGCCGTGACGTTGACAGGTCTTTGATGCGATCAAGTGTTCTGCCTTGGACC
AATTGGACACGTTCGTTCTTCGCCGTTGCAGTTGGACAACCTGTTACGCTTCATAGTACT
CCCTCTGTTTACCACTTAAAAAGAAGTACTCCCTCTGTTTTTTTAGTCTGGATATAATAT
TTGAACAACGCTATGCAGCGGCACCGCACCTATAAATTATCAGTGACGACGTAGCTAATC
ACCCTTTTAATGTAAAAATAGTGTTGCTTTATTAATTAGGTTACTTCAAGAAGCATTGTC
ATGGTGCGGCCAAACCCCCCTCTCTTGATCATGCATGCATCAAATGATATCATTAGATTT
ACTCTAAATGATCGAAATTAAAAAAAAAATATCTTTGAAACCGTTAATTCAATCGATGAT
CCGTTTTCGTCATCGACTTAGTTTTGATGAAATCTTCAAAACTTGATCTCGTATAAACAT
GTTTCGACAACTTTTTTTCCTCATACTTACCACATTTGCTGCGCTTACTTGTCATATTAG
TAAGTACTTACTCGTGTGATAAAAAATAATTTAATCACCATATTTTTGAAAATTGCGTAT
AAATATGACATCTCGACATAATCAAACTGGCAAATACAAACAATTTTTTTTGACGATTAC
GTGCAAAAATATGACAAGTCAACATATTTAAAACCGACGACCACAACAAATCTTTTCTGG
TAGTCGTTTGTAAATATGACAACTTGACATGGTTAACCTAGCAAGCACAAAAAATAATTT
TCTAGCAAAGTTGTATGTAAATATGATAAGTTGACATATTGAAATTAGTAAACACAATCT
ATGACATGCTTTTATATCATATATAATAAAAATTGCTATGAGGCAATAATCATTTGTCGA
ACATGGTCGTCGGGTTTAAGCAACTGTAGTTGCCAAAAATCTATACACACGGTTGCCAAG
TAGATGTGTATAAGCCTGACAGTAGATGT
