Map Locations of contig_43702 (11081 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43702

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59542 2 2822 bp MLOC_59542.1 Available Available LOC_Os01g59620.1, FRAME:+1, EVALUE:0.0, 13101.m06339 protein histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
MLOC_59543 3 1499 bp AK376459 Available Available None





CDS Structure of MLOC_59542






CDS Structure of MLOC_59543






Contig Sequence (11081 bp)

>contig_43702 11081 assembly3_WGSMorex_rbca.fasta
CGGGCTACGGCAAATAGCGGCGATCCTCTAAATCAGCTATAGCGGAGCTATAGCGGGCTA
TAGCGGCATATTTATACATGATACCATTTAGCGGCACCCTGCTGAAAAGGCTATAGCGAG
GCTATAGCGGGGCTATAGCGGGCTATTTATAACTATGGGAGAGACGTTGTAGATTTGCTA
CTCGCTTGGTTATTTGTACCCTAAAAAATGCCAATTGTTTCATATATTTCTAGAAAAGTG
CCACCGTTAGTCCCTTTCTTCTCAATTAATTGACTCAAGCCCGAAGAGATCAGGACTCCA
GAAATGTTTGTACTTCTAATTTATCCCAGGGTTGAGTTGAGGAGTTAGGACTTTAAAATT
TATCCCAAAATTGAGTTGAGGAGCCAAGACTTAAAAATGTATTCCAAAGTTGAGTTGAGG
AGTGAGGACCTCAAAATTCGCGTGTTTTCTCTCCTTTCTTATAAAAATGTTGCGTGATTA
ATACCTTTTACGGTTTGTTGAAGCATGTGTCGTATAATTACATATTCATTATGTATTAGT
ATCTTATTTGCAAATAATAATTTATTTTCCGATGTTTGTACTTTTATAGTGATTTTTATA
GTATATACTCTATATTAGACTTGTGAATACTTCTTTTCATCCTAATATAGTCATCGGTCC
ATTATACCTGATCGCACTAGGGCCCTCAAAATGCCATGGCCAGCCCTGAAGACGATGTAA
AAGTCATGCCCTAAAATGCATCGCGGCTGTGTTTTGCATATTGGAGCACTATTTTTGCCA
CTTAACCTGTTAGGACATCTTTAACACCGATCCACAAATTTCTTCACTATATATTCGTTT
TTATGTCTAGACACGGTCCATGAACATGATAGGAGGAGCCATCCAACGCTAATTACAAAG
TACTTCCTCTTTTTCGGTTTATAGGGCTTAATTCAAAAATTTCACCAACTAAGATAGATG
ATGAGTGATGAAATAATTTTGATAGTTTGCAAAAGTACTTAACTAAAGAGCTCGTTTCAT
TAAATGCAATGCATGCATATGACCAATAAATAATTAATAACTTTTACATGCATTGGTGAA
TTTTTTAATCCTTGCATGAAGTGATTTAGGGCACCTTGATATCTAAGTGTGTGATGGAAA
GCAATAGAAATAAGACTTATAAAACGGAAAAATGAAAGTTTTGAGATGAGCCCTTCAAAC
CGAAAAGGGGGTGGTATCATGTTGAGAGGAGAAAATGTAGATGGGGACCATGCATATGGT
GGAGATATTTATGGTTTAGTACCGGTTGGAAGAAGAGAGAGGAGAAGGGGGCCATGCATG
TGCGGATGGGAGGAAAGAGAGAAGAGAACGGCATGCATGTAATTGATCAAGTGCATGTTC
GGACTCCCGCAGAGCTTTTCCACGTTTGTCTTTGATGCAGGACCGCGTTAAATTACAGAA
GTAACAATAGTGTTCGGTCGGTCATATGTTGGAGTTTTGTGGGTCTCCCTTAGATATGAT
GTTAGAGCATCTTCAATAGAAGATACTATTGCTTGCATCTCCGAGGCCAAAAACACCTCT
CCAACAAATGGTATAGATGCAAAAAAATTATATCTCCGTTTTTTGAAGATGTAAACTACA
ACACCTCGCGGTCCAAATTTGCATCTCCACCTACAGAAGATGTAAAACTGGCGGCCGCGC
CAACGCCAACTGCCTTCCATTTCATCCCCCCTTCCTCTTCCTCCCAGCCGTCGACCGCAA
CTGTCGTCGCCGCCCGACAGCCGTCATGCCACGCCATCGCCGTCCTGCACCACCTCTGTC
CCCTCCGCCGCCATCCTGCGCCACCTCCAGCCCCTCCTCGACCCCCTATCGCCGCCCTGA
CTCCTCTCACCCGCCACCGCTCCGCGTCCCGCAACCGCCAACCCCGATTCCCACGACAGC
TACCCCCGATTCGCCACCCCCGCCTCCCGCCACCGCACCGACTCCCTGCTTCAGCCGCCT
CCCCCGATTCGCCACCCCCGCCTCCCGCCATCGCACCGACTCCCCGCTTCGACCGCCTCA
CTCTGCCTCCCCCCGCCGTCTCAATTCTCCTCCGCCTTCGTCGTCGCTGCCCCAACTCTC
CTCCGGCCTCACTCTGCCTCCGCCATCGCTGCCCCAACTCTCCTCCGGCCTCGCTCCACC
TCTCGTCGCCACCTTGATCCCCAGCGTCGTCGCCCTGGCTCGCGTCCCGCCATGCTTCGT
CTCCGCCGCCGCCGCCCCGACTCTCCTCCGACGCTGCCCCGCCTCAACTCTCCTCCGGCC
TTTCTCCACCTCCCGTCGCCGTCAATATACATCTACGGTTGGAGTTGTCTCTTTTTAGAG
ATGTAAAATATATTTTTTAAAGATGTAAATTTTTTACACCTTATGTTTTACATCTTCAAT
TTTTCATCTTTTATTGGAGATGCTCTTATACACACTCACGAAAAACAAGCAAAGCTGAAC
TACCATCACATCTGAAGCGTCGATTTTCTGATCTGACGGGCGAGAAGAAACCAGTGGCGA
CCCTCCGCCGCGCCTCTCGGGTAGCACTACTAGTGGGACAGGTCCGGAGCAAACGAACCA
TCCTCCCACCCACAGACCACAGTCCCCCACCAAATTTCCCCTCCTGCCCGAAGTTGAACA
GAACAGCTCCCATGGCTCCCTCCGTCACCTAGAAGCCGCGGAGCGGAGCCCCGGATACTC
GCCAAGGTGAGCTCTTCTCCACCCAAGGTGCGAATCTGTACATGGTTTGCGATTTCTTCC
AGTGTTGCTCTGGTCCGCCGGGGCGGAGGTCGTGGGATCTCTCTCCCTCCGCCCGCCCCA
AAAACCCCACCTTTCATGAGCTCGGGTGGCGAGTCACCCCGACCGGCGGCCGGACTGGGA
CCTGCTCTCCGGCGGCGCGTCCTAGGGTTTCCTTCAACATTCTTGGGCATTTTTACCGCT
GCTTGCTTGATTGCCATCCGTTTGCTCGCGGAATCGATGTCGATTGTCGTCTATTTTGCT
TCGGGTTTTCCTCCTGGTTGGTTCGATTCTTCCATTTCGAACTGCTGTGACCCGTCAGGA
AACCTAAAGTTAGAAACTTTACATTTCCGCGCGGGCGCGACCACGCCGATGTGCTATGTC
ATGGACACTAACTCTGCTTTGCTTGATGCAGGGATCCAGCTGCTGCGAGTCAGTCATGGA
CCGGACATCGAATTTCATGCCTACCCCTGATCAGAGTGTCCTGGATGTCCAGCCCCTGAG
GACTCTGGCTCCGATGTTCCCTGCGCCTCTGGGGGTCAATACGTTTAACCTGACCAACAC
CACCCCGCCATTGGTATTTGTCACTTCAGCTGGGCAGTTTCCAGGGGGGTTTGGTGCTCC
CGGCCATCCTGCTTTCAGGTCATTCGCTGCCGCTTTCGGTGCTCAAGATGCTTATGGAGG
GCAGCCCGCCTCTTCTCGTGGCCAGGATGCCGGTGGAGGACAGGCTACCGCCTTTGCTGA
TAAGTATGCTGCTAATGGAGCTACAAATCCTGGCGCCACCGCTGACTGTCCAATTGATGC
CACCCCTATATCAGCTTACAGGTCGACACCGCCAACAATTATACCACTGGACGACGATGA
CGATGACAATGAGCATTTGGCTGGCAACCAAACGTCAGCATCTGGGCGGAAGATCAAGAG
GCCGTCCCACCTAAGTGGATATAAGATGAGTGGCGGTTTCGGCAGTGATGACAGCAATGT
TGTGAAGGCCAAACGCCACAGGTCCTCTTACAGGAAGGCTGGTGCTGACAATGAGTTTAC
CTTGGTGCCCCTTTCATCAAGCAATCCCAGGGAGGTTGTGGAAGAGGTTCTCATGACCTT
TGAGGCCCTGCGGCGTAGATATCTTCAGGTAGATCAGGCACAAGAGAGTAGCAAACGTCC
AGACCTTAAGGTTGGTGCGATGATGATGGCACGTAATCTCAGGGCTAACATAGGCAAGAG
GATTGGAGTTGTCCCTGGAATCGAGATAGGGGATATTTTCTACTTCAGGATGGAGCTATG
CATTATTGGCTTGCATTCTCCTACCATGGCTGGAATTGATTATATGACCCACACCTTTGG
TGATAAGGATGATGATTCTGTAGCAATATGTATTGTCGCTGCAGGTGTTTATGAGAATGA
AGATGATGCTACAGACACACTAGTCTACAGTGGTTCAGGAGGTAGTAGCAAGAACAATGA
GGAGATGCATGACCAGAAGCTTGAGAGAGGTAACCTTGCTCTTCAGACGAGCCTGTTGAG
AAAGAATGTGATCCGGGTTGTACGGGGATTTAAAGATCCAGGTTGCCTGGGTGGGAAGGT
TTATATGTATGATGGCCTCTATAAGATCCATGAGTCCTGGAAGGAGAGAACAAAGACTGG
GATCCAGTGCTTCAAGTACAAGCTGCTGCGGGAGCCAGGACAACCCGAGGGAATGTCAAT
CTGGAAGATGTCCCAGAAATGGGTAGAAAATCCAGCAACTAGAGGTAGAGTTCTACACCC
TGATCTATCATCTGGTGCTGAAAATCTTCCAGTGTGTCTTGTCAATGATATTAACAGTGA
GAAAGGACCAGGCCTTTTCACCTATATTACTCAGGTCAAGTACCCAAAGCCACTAAGTTC
TATGAAACCATTACAGGGTTGTTCGTGCCTCAACGCTTGTCTGCCCACTGATACCGATTG
TGGTTGTGCAAAGTTTAATGGAGCTAATTTACCTTATAGTTCAACAGGCTTGCTTGTATG
CCGCAAGAATAGGCTATATGAATGTGGTGAATCTTGCCAGTGTTCAGTTAACTGCCGTAA
CAGGGTGACACAGAAGGGGGTTAGGGTTCACTTTGAGATCTTTAGGACAGGAAATCGAGG
CTGGGGTCTTCGTTCATGGGATCCTATACGGGCTGGCTCATTTATCTGTGAGTATGTTGG
TGAGGTTATTGATGATGGTAAATCGAATTTGGATGATGGTGAAGATGATTACCTTTTTCA
GACTGTGTGTCCTGGTGAGAAGACATTAAAATGGAATTGTGGACCTGAACTGATGGGGGA
GCAAAGCATGAATAATTCAGATGATACATTTGAGCCGCTGCCTATCAAGATAAGTGCAAA
GAGAAAGGGAAACATCTCACGTTTCATGAACCATAGTTGTTCCCCTAACGCCTTCTGGCA
GCCGGTTCAGTTTGACCATGGAGATGACGGTCACCCACATATCATGTTCTTTGCATTGAA
GCATATCCCTCCCATGACAGAGCTGACTTATGACTATGGTGAGATTGGAACCGATTCTGG
TGGTATAGGTTCCCCTGGAGCTAAGAGCTGCCTTTGTGGATCCTCAAATTGCCGGGGCTA
TTTCTGCTGATTATGGAAGATGTGCATTCTGCTTATCAACATGCCAATCTATCTGCTAGG
TAACTCCTTTGCTGTTGGGCATCCCTGCTTGTCATGCATATTTACAGTCATCTAATTCGT
TTTTGATAAGCAAAGCAATTCATGCTGATAAATACTAGTTGGGATATTTGTATTTTAGCT
TCGCTGTAGCTGTACTACTTGTGCTTACATGGAAACTGTGTTGTATGTAGGAATGCATGC
AAGAACAATGTTATTCCTGTCTAGTGGCATGTAGAAATTCTTAGCTTCTCTGTTAAGAAT
GAACAATGTAATTCATGTCTAGTGCCTTGAGAATTTTTCAGCTTCTCTGTTAATAACTCG
AGACATTTCATGGTTTAGTTGTTCTTGCTACAAATTATTTGGGTCAGGTATTTATGATAA
TATGTCGATGTGTTTCATATCCTGCATAGGATTTCTCTGTTAAATTTGTTTTACAAAATT
ATTTGGGTCAGGTATTTATGATAATATGTCGATGTGTTTCATATCCTGCATAGGATTTCT
CTGTTAAATTTTTTTTACACCATATAAACTTTGAGCTGTTACTTTACTTGTGTAATGGTT
TCTAATGCTTGTAAACCAGCCCACCTCTACTTTCTGAACCTAACTTGTGCTGGTCTTTCG
CAGATCATTTTTTGGGTCGTTCTGGTGGTACCTAGGAGGGAAGTGTGCTCAAGTCTGACA
GAGGTAGGAGCGTCTGACAGAGGAAGTGTGCTCAAGTCTGACAGAGGTAGGAGCGTCTCA
AATGGCTCCCCTCATGACTACGCCGTAGTGGAGATAGTAGACTTTTGTCAAGCTCTGCAA
TGCCCATTGTCACACAAGGACAAAGTAGCTTGTTGTGATTCTGTGACCGTAGGCCTTGCG
AGGTCAGTTTTGTATGATAACCTTAGTATTTGGGTAGCTCAGGTTGAACCAAAACTCGTT
GCAACCAATATGGCTTCAAGTACATTCAGACCAGTGGGCTGGCTTCAAAGTCTAGAATTT
CCTGCCACGGTTGTTCTCTGTTGGGTTCTGTTCAGGTTTATATGCTACAGAAAGTTATGA
TGTTGACTCTTCACATTCAAAAGAAGTCTTCAATGGCATTAACTTATGTAGCATATAACT
CATATTTTGTTGATCAAATTCATGGTCAAAGTTTTCCTTAAAATGTGTGTACACCTCAGA
AACCCAAACCGAGGGAGTAGAATTGGTTGGAGTCTGTGGTATGCATTGCCAGTTCTTGAG
GAGATTCCCGATAATTGCTTTTAAATATTCATAATAACTGAAAACGTCTCTGGGTTACGA
ATAAGTTACAGCTACACCAGGAACTTCAGGCCACAGGCCCTTGGCCATAAAAGCGATGTA
GTAGTACACTGCATATCTTAATTCTCCAACTGGAGCATCAGTTACAAATTAACGCTAGAT
TTTTCAAGTAGTGCAATTTACAAGCGAGTGTAACAGTGGGGCAAACTCATACCAATGACA
TGTAAAGAAGAGCTACATCGTCCCCGTCAAAAAATAAATAAAAAATACAGCGTTACGGGA
ACTGGAAAAATACTACAAAGAAAAAGCTGGTTCAGAGCATCCTCGTAGTATTCCCGACCC
TACACTCACATGTGCATACGCTTCTTGATTCTCTGACCACGCGCCGCGACCGCTGAATAT
GCACCTTGATGTTCACCAGCTTGCCAGCAATCTGCATTTCGGGCATGGAACGGATAAACT
GTTATAGTGAAGATTACTGTATTTCTTACTCCCAACATTTACACATAATAGGAACGAAAC
TGCAGATAAAACAATTGCCTTATGGTGTTGTTGAGCTCACAACTGATGCAGCAGCAAAAG
AACACTTCTATTTTGCAAGTATAATATGATGAACAACTCTAGAAGAATGCCAGGGAATTT
ACCATTCTCCATGTAAGGTCTTCTGGTCCAAGGGGCTGAGCAGGACTCGAATAAAGAAAA
TGCCTCGAGTACTGTCAATGCATCACGGGTAAAAATAGTCAAGAAGGTGGGTCTTCCAAG
AAACATAAGGGTAAATTTGGTTGGTGCCCAAAACACCAAAATTGGCATATTGCCCATACC
AACTTAACCCACTCTAGTTCGTTTTTCTTGGCAACATTGTCCAAATCATGGGCAAGCAAG
ACCTTCACTGAAATTTTGGCTAGCCAAACTTTTCATAGAGAGAATTTTGGCAAGCATACC
CTTAAATCGTACAACCTCTGTACCTAAATAATTGTAGTTGGGGAGAACTAGTCTAGTTCT
CCAGAACTACAATTATTTAGATACGGACGGAGTAGTATTTAAGTTTAAAATAAAAAGCAA
ACCTTGAGAAGATTGGATTGCATCTCCCTGACTCTTTTGCCATCGATGCCTCTTAGGTAC
TTCACCAGCCAGCCAGGTTGCACAGCATCAGTTGATGAAACAAACAATGCTATCTGCACA
ATGAAGTAACATGTCATTATTTCACAGTACAGAAAAGTTTGTTCTCCAAACGCAGCAGAC
CAATGCCGATGACCAATGGTGAGACACAAATACATAATCATCATGCTAAAATAAAATTGT
AAGCTTAAATCTTGATGGGATGTAATATATGCATCTCCAACAGACTGCATGTATAAACTT
TCAGTGCATGATCACACATCTGCACATCTATATAGACGTCTTTACTACAGTTTAATTGAT
TGATATTGCTAACACACCATTTTTTTAATTTATAGTGACCGATATCACCAACACATCTTC
TCGGTCCATCTCACAGTGTAAGTATATAGAAAATAAATAATTCCTAGGTACAATGATTTC
ATAGACACCGTGCCAACTTTTACACAAGCTTCAGAAACATCATTGGTGCAGAAAAATTGT
TATATGTCAAAAAATAGATTGCATTAATTCTACAACAGTCAATGCCACTGAAGTACAGAT
CCCAGACCTGTCCATCGCCAAATGCCAACTATGCAACTATAGTTCTCATGTTACTTGTTA
GTAACTCATAGAGATGGAAATATTTGTTTGTTATTCATGAGATTCAACTAGCAAAATATC
CTCATTTTTTTCAGGTAACAGGTAAAGTTTTGGAGCTCCAGTAAGATATACCAAGGGTCT
TTCGCGAACCTTCATGCTTCAAATTACGGACAATGGTAAGGCATGTTGTAGAACAATGGG
CCAACTATACCTTACTGTAGTCAAGTATTCCTTCAAAAGGGAGCTCTAGCTCATCGCTGA
TTATAACTGGGATACATCCACTAACAATTGCATCAAACAGGCGAGCAGAAGATGGAGTAT
CCCCAGCAGGATTCAAGCAAAAGAGAGACTTGCGCATGCCAGTCTGAGCTGCTACTTTCC
CCTTAGCCCCAGCAGACCCTTCTTCTATGATTATGTCTTCTATGTTTTGTAATTCTGTCA
CAAGTTTACTGCGTATCTTCCCACCCTAAGCAAGGTCAACAAGGTGAAAGACCAAAGGCA
AATAAGACAACGAAAAGTGGAACTATCAATGCATATTGCATATATATATCTGATTTTATC
AAAAGCTTGAATAGTAGCAAGAAACTTACAGCATTTCTTTTAAGTCTTCCTCGGAAGAAC
AGCAATGTACTTCTTTTAGATTGAGTTTCTGACACACACTTATAATCACAAAGGTCAACA
TTTGGGACATATGGAAGGATAACATCCTTTTCAAGATAAACTTGCCCAGGTTTATACCTG
ATATAAGGTGGAAAACATGAGTTGTGTTGCTCAACTGACGTATGCAAGCAGCATAGAGGC
ACTGTGGCGAACAATAAAGGAATGAAGACCATACCAGTTCCCAGTAGAATCCATATCAGG
TAGAAGCCATATTGCTTTCTTAACAAATCTTCGGACTGACTTAAAAGACCATGGGTGATG
AACAGGAATAACATGATCTCTGCCTTCTGAACGTTGCCAAGCAGGTTGATCAGTCACCCA
CTTCAAAGCTTCCTGATTCCAGGTAAGTAATGGTAAGATCATCTTGAATATAAATAGGGA
TGAACAAAACAATTAATAATTTGCAATCTAGACAGAGAGTTGGATATTTCCTACAGCCAG
GTGAACCCCCAAAAAAAACATTACAGATAGTCATAAAATATTGAGTTCATTCCATGGCAT
GCGTTGTTATGATTTCTGGTGTCACTGCAGAACCAAATAACTTTTTCTTAATAATTGATG
CCAGCTGATATTCTGAAGAATCAAAGTGTAGCTTGGTCATATGCATGTCCTACAACAAAT
ACTAGCTAAAAAATTAAACCTTGAGAAATGCTCGCACACCCTATAAAGTGCCTTGCATTC
TTGTTTCTCCAGCAAGAAGTAACTGATTGTTGTGAAAAATGGAACGTAGAAAATGTCTGC
TTCTTCTTGCCGCTCAACCCTGATAACATTCTTCAGAAGTCTTTGTGATTCAGGAGCAAT
TAGATCAGCCCACAGCCAGTAGTCAATAGAATGCTGCATATGTGAATGGAGATCAATTAA
AACAGTAAAACAAAACAAATGGTAAGTTCCAGCTTCATAATGCTGCACTATTACTTAGTG
TACAGATATTTAACAAACAATGTTGGAAAACTGATGTATTAATTTGTGACATGCAGAGAA
GGTTGATCTAGACAATATTAGTGCATGCTATCCTAGTTCACTGTTTCAGGCTATATGGAA
ACAGGGTATCAGCAATAAGAGATCCGAAGATCGTCAGCAAACGATGCACATCCTTATGTT
TGAATATTGTAAGAATTGACAAGTATCTACATATTCAGACAAACTAGTCTCAGTAGCTAA
TATAACAGGCACTTCAAAGCTCTAGCAACCAAAATATTGTACATATCATCACAAGACAGA
GATGCAAATCCCAATCTTCAATTTCTCTGTTCAGGCTGTAAACATAAATTGCTACTCCCT
CTGTAAAGAAATATAAGAGTGTTTAAATCACTACTTTAGTGATCTAAACGCTCTTACATT
TGTTTACGGAGGGAGTACAGCGCAAAAAACTACTCCCTCCGTCCCATAATTCTTGTCATT
GTTTCAGTTCAAATTTGAACTAAAACAACCCCAAGAATTATTGGACGGAGGGAGTACTTA
ATATAAGATCCAGTCGAGAAGTGTGTGAGCCTCATTGACATAACTAGCTTAGCAACATTG
GGTCACAAGAATACTAGAGATACCGAGAAATCCTACAGCAGATTAGTACATAACTATGAG
ATCCAACATACTAGCATACAGCTCATTTCAGAAACACTTGAAAATCTTCCGAAAGCATCA
AAGAACAGATTTATCACAGTGGAATATAGCAATGCAGCATTACTACTAATGCTCCACTTT
CAGCCAGCAAGCAATCAAATGCCCCGCAGGCTACAAACTAAGCGCTTTCTACGACCAAAT
CTGGGAACAAGGAGATCTCGTGGCATCAAAACAAAGCGACAGTGAATGATCCAATTCGAT
CTCGCGGCTCGCTCACCTGCTCGATGAGCCTGTGCACGGGGCTCCCGTTGGAGGTGAGGT
TGGTGGTGTCGCGGTACGAGTCCCTGAAGAGCCTGAGCAGATCGTAGGTAAACTTGCGAG
GCATCTCGTACACGTAGACCCTGAGCGGCGCGGGCGCCGACGGCCACGCGCCCCGGGGGT
CCCCGTACAGCCGGGCCTCCTCCGCCCTCCGGATCGCGGCGTTGAGGTCCCCGGGGGCCG
CGGGGGGGGCGGCGGGGCGGGGGGCGCGGGACGTCGCACAG