Contig Data
morexGenes
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Map Locations of contig_436759 (3617 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_436759

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59510 1 1767 bp MLOC_59510.1 Available Available LOC_Os12g03130.1, FRAME:-1, EVALUE:0.0, 13112.m00268 protein CDC45A - Putative DNA replication initiation protein, expressed
MLOC_59509 1 529 bp MLOC_59509.1 Available Available None





CDS Structure of MLOC_59510






CDS Structure of MLOC_59509






Contig Sequence (3617 bp)

>contig_436759 3617 assembly3_WGSMorex_rbca.fasta
AAAATATGTCTACATACATCCATATGTAGTCTTTTAGTGGAACCTCTAAAANNNNNNNNN
TTTAGGAACGGAGGGAGTAGATTAAGCGTTTTTTTATGAACTACTTTTGCTTGTCTGCTT
GCGCAATAATGGCAATATCCCATTTATCTTATTATTAGGCTCTGTTTGGGAACTATTTCC
TTCGTATGCTGGCAAAATTATGGCCACATGATCTCTATTAGGCTATGACTATTTGAACTG
AACTGCATTTTAGTTGTTATTTTGCTTGCCATGTGAACTTAATGTGTATTCGCTATGGTG
TGAACTGTATTTTAGATGGCTATTCAATTACACATGTGCCATGTTTCCTATTTTCCTCTG
TATATTTTTCAAAATCTGTCAAATTCTAGCCAATTTCAAAAAACGCTTAAGTGCGATTAA
GCTGCCCTTAAGCGTCCATTGCTCTAAGCTGTGGCCTTCCGCTTCGCTTACACTTTCCGC
TTTTTCGAACATTGGTCAAGACATCAACTCTCCATATGTGGCATGTGTACTCATCAAACT
TAGCTAAGCGGTTGGCAACATCCATCAACCTTTATCAAAACTCGGTTTCACATTCTCCAT
AGACCTAGAATAGGAAGATGCGGACAGAAAACTCTTGGAGGGGGCATTTTTGTGCGGAGA
AAACTGTAAATAGAAGTCTAAAATCCGAACAATATACTGCCCTGTAAAATTTATGATACC
ATTGTGTACTGATGATTTGGGAAGAAATGTGCAGTGATTGATTTGAGAAGGACTGGGCAG
TGATGGTCTGGAAGAAATATTTGGCTTATAACAAACCAAGTGCAGCTATGTGGAAAGAAG
ACGAACTTACATTTGGCTTATCAGGATTGCAATCCTGCTCAGTGAATTGGCCCACGAGGT
CACAAGTGATACAATCTTAGGCAGCCCACCATGACTGCATTCTACAACGCATCAACGGTA
TCCTCAAGGAATTCTATCTCATTAAACTATGATGGGGGCTGTATGTAGAACTGCCAAAGT
GTAAAGTAGCAAAACCTACCTGCCACAAGGAATGCAGTACAAATGATTCCTTAGGAGAAA
TCATAAGGATTTAATCCTACGAATAAAACAACGAATATAGGAAAAGGTCCTAAGGATTCT
AATCCTCCAAAAATCCTATGCAAATCAAAGGAGCCCAGGGGAGGTGTCCCTGAACTGGCC
ACTATGATCTGGACAAGAAAAGGTGGGACAGGAATAGAGGAATAGCAGTGACTAGTCCTG
ATGATCTACCACAAACAAATGTCAAGCATAGAACACTGCAGAATGTTCATACATAGCACC
AGTTGGATCTGTGCACGGACAGTGTCCTTATACTAACTTTATAGATGAAAGATCACTGAC
AAACACCATGTGTTGACATCTCTGCACTCATCAAAGATCTATGAGTTTGTCTGGTTCAAG
ATAAAACCATGATTTTCTAACAACACAGTAAGGATTTTCATCAACAGTATACGAGCACAT
GAATGAATCAAATCACTGTAACAACATCACAAATCAGCCAACAGGGCCTCTGAATCACCC
CAGTTGCAAGTTAGATGTCTTGTAAAGTACCCTATGACACTTGTTCTTTCAGAGTTCAGA
TTAATTACAGGTTCAGGACATTTGGGCAGAAAAATCACAGTAAGTCCATAACCCTGTGAA
AGACATGATAAATTGGCCCTCTGTAACAGAAGTCCTGTTCAAATTTGCTTGCTCTCATTG
TAAGAATGGTATGAAACTTTGTAAGTATGATTTTAAGTAGCTAAGCTAAAAATTGTTTAC
AAACATCAATTCTGTCAGGTAGACAATGGTAACATAGAGTAGAGCAACGCGTGTTAGTTT
GCACACTAAAAACTTGAAACAACTTTATTGATACAGAAACGAATACAACATTATCCTACA
ATAAAAGCTGCATGCTTATGCAAGTACAGATACTAACATCCATTCTATCAGGTAGAGAAA
CCAGTAAGCAAGTGTACCTTGCCCCTTGTAGGTCAGAATCAGGTTGGCATCTGAATCTGA
TGGATTATCCTTTGCTAATGGGGCAGTTGGAGAGTGGAACAGCCTCTCCTCTATCACTAA
AAACATGATTGCCAAGCAACTCAGATGTTGCAAATTACAATGTTTGTCAGGCTGCTATCT
GTAATTTGGTGAAAATATCAGGTGAGCAACATGGCATGCACCACCATCATCAACTAGTCA
ACCTCCTTTATTTAGAGAGCACAAGCCTCGGATTTCCCATCTTGGGAATGAAAGAATCAT
CAGCGTGGGGCGAGCACATGGCATCAAAGCTTCTCTGTTAACCGAATCATGAAAGAACTG
ACAGCAACAACATCAAGAACAATCCATGATGACTCAAACATGTCATGGAAATAATCTGCA
CCGATCTCCTCTGCCGCTGACCTAAATGCATTACCAAACGCGTTCCCCTGAACTGCCCCG
AGCCTTGGCTTCCCACATACACCAATGACCAACACCTTCTCAGGCTCCCTTGCTAAGCAG
GCACAGATTAGTGGCTTCATCCTTGCACCCCTCTCCTTTAGTGCATCCATCAGGAAGAAA
CAGAATTTAGTAAGCGCCTGTGGATGGCACAGCTTAGCAGTGTCCACTGGATCATCAAGC
TTCACCCACCGGAACTTCTTAGCACTCCGGATGAATCCACTCTTGGTGATGGCTGAGCTT
CCCTGCCTCAGTATCGCCATCTGTATCTCAATTGCAGATTGCATTCCTTTTCGCAGCTGA
TCCACATTGCTCAGCGACAACGCAGAGTATGCAACCCAAAATTGCTCAGCAGCACAGGAC
TCCTTTGAGTCCTTGGACTCGGCATTGAGGGATTCAAGCAAAGCTGTGACGCCATAGACA
ACATCCGCAGCAGACACCTTGGACCTGTAACCGTGCACCCTCAGGAAGCTCCGGTAGTAG
AACTCAGTGAGCCCATACTCAGGCAGGAACCGATCAAACTCATCGCGCATCTTGCGCTTG
ACCTCCATGCTCATGTACTGGAACCTCTTCTGGCAGTCGGCGAGCGGGAACCCCATCCTC
GCTAGGAGCAGCTTCAGCTTCTTCAGCCCGTTGTCGCTCCAGGTCTTGAGCTTGGTCGCG
ACATATGAGGAGCAGAGCATGGAGTCGAACAAACTCCACTCCCGCAGCAGCATCAGCCTT
GGCTCGTCCTCATAGGCGATGCGGGAGGCCTCCGGCGCCCGGATCTTGGTTCCATCCTTG
AGCGTCACCACCGACCCGAGGCCGGACGGGTCGAGGTTGCCTGATCCATTGATGTGCTGC
TCGAGCTCCATGACGGCAGCCTGGTAGCGCTCGTTGGTGATGCGCTCGTGGACGAACTGG
TCAGTGAGGGAGACGCAGGCGAGCCAGAGGAGCTCGTTGGTGTTCCTGCGGAGCGCGTGG
GCGAGCTCGTACATGAGGCACCCCGAAGGCTTCCCGTGGAAGGTGCCGAGGCGGTAGTAC
TCCCTCCGCAGCTTGCCGAACAGCCTCTCCGGGTCGCCGTCCGCCTCCTCCCCATCGTCC
GAGAGCCGCCGCCTCTTCCTTCTCCCTCCCTCGGCATCAGAATCGGAGTCGGAGGCGTCA
GAGTCCTCGTCCTCCTC