| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_43536
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_59389 |
3 |
1492 bp |
MLOC_59389.2 |
Available |
Available |
LOC_Os03g08320.1, FRAME:-3, EVALUE:7e-34, 13103.m00955 protein ZIM domain containing protein, putative, expressed |
| MLOC_59388 |
1 |
984 bp |
MLOC_59388.1 |
Available |
Available |
LOC_Os03g08310.1, FRAME:+3, EVALUE:6e-27, 13103.m00954 protein ZIM domain containing protein, putative, expressed |
CDS Structure of MLOC_59389
CDS Structure of MLOC_59388
Contig Sequence (6034 bp)
>contig_43536 6034 assembly3_WGSMorex_rbca.fasta
CTAAAATGGCCTAATTTTCGGCGCGATGCTTGTTTAGCGCGGTTGTTGGAGATGCTCTAA
GAAAAGAGGGTCATGATCGAAGAGAAGAAGGCCATACTCGAGGAAAAGAAGGTGAATATC
GCAGCCGATGCGAAGGACGTCAAGATGTTGTCCTTGAATTTAGAGTTTTGGATGCTAAGT
GGTGACGCAAGGATGATTGTGTAAGTCATCTGCTATAAGATGTTGCTGCGGTATAAAGAT
GAGTTAGAGGCGGCGGCACGTACTGCCGTACCCAAAAACCATTTTTCACATATGACAGAA
CACACTAACACATAATTAAAAATAACCAGTAAAAATAACATATTGCTGGCCATCACTACA
CTTAATCCAGCTTACAAAACTAAGATGCGTAATTAGTAAACTTGCATATACAGTAACAAA
TCCATCCCATCAGCATGAAAGAATTCTTTTATTCGACACCAAAGAATTCTCAGACACATG
AAGAACATACCCCACTACTTAGCCGAGGGTATATATTTACCCAGGGGCACGCGGTTAATT
AGCGGGCGTAAGATAAAAACGGCAACAATTAAGGATCCACGTAGCAGAGTACTACTACTA
CTACAGTATACGCTACTACGTGGAGAAGCAGCAAGGCAGCGATTTATTCCTCTCCGGGGC
TCGTCAAATCCTTCAGTTCAGCTGGAGCGCGGAGTTGACGCCGAGCCACGGCGCGCCGCC
GTCTTCCGGCGCACGCTTGCCGCCGGCCGTCTCCTTGGCCGCCGCAGCCCCTGGCGCCGC
CAACGGCGCAGGGTACGGATCGACCGTGGCGAGCCTGCTCTTCCTCTTCTCGAGGAACCT
GTGGAGCGACGCCTTCCTCGCGATCGGCAGGTCTGGACAAGCGCGCGCACGCCGCAAAGC
CTTCGTCAGCGGAGCACGGACAGTATGGATTTTGATTTGTAATATAATACGAGCGTAGCG
CGATCCTTACCTGCCAACCAAGGCTGCCCCGGCGCGCTCTGGCAGACGGGCTCGGCGGCG
GCGTCGGAGGCGGGCGGCGGCGCGATGAAGGAGCCGGCGAGCTGCATGAGCTCCCCGGCC
TTCTCGGCGGGGAAGTCGTCGAACACCACCGTCCTCCCGCCGTAGAAGATGGTCAGCGGC
GCTCTCTCAGGCCCCGTCCTAATCAAAAACAGCACAAGCATCAAACAGGAGCGAGTATTT
TCGAAGAGCTCACGACGTGCTCCGGTCTCCCGGCATGAGCAAGACTGGCCGGCACGATCG
AAGCTCTAGTTCGCGCGCGCGCGCGCACGTACCTGTCGTGGGAGGCCCTGACCATGCCGG
CGTGCTGGGGGAAGAGCTCCATGGTCCGGATCCTCTCCTCCGACGCCACCGCCTGAACAC
CATCCCCGCCGCCCGGCATGAGGCCCATGGTGACCACGCCGCCGGGCTGCTCCTTGATGT
ACTGCCGGAGCAGCCCAAACGCCGCGGCCAACCTGCTGCCGCCAGCGGCCTTGGCCGCCT
GCTGCTGCTGCTGCTGCTCCGCTCCCATGTCGAAGTCGAACGATCTGGCGCGGAAGGAAC
CGACGAGGCCCGTGCCCGCCGAGGTACGTATGTGTGCGTCCGTCCGGCGGGGGGTTAAGT
CTCGGCCGCCTCTCTCTCTTTTCGCGGGCGCGTACAGCTGGACCAGTAAAGAATAGGCCT
AATTCCTGTTTCGCGGGCAGGAAAGGAAAGGAAAGGAAAGCGGCACGTGAAAGGCAGGCG
CCGGGCGACGGTCGACCGGAGACGGGGTGCGACTAGTGATAGTCCGCCTCCCTCCCTCCC
TCCCGGCACCGCACGTCTCGCCCAATTTCGCCGTGGGGTTTCCTTCGGTCGGCGTGTGCG
TGTGTATTTGTGGGGGTGTTGTGCATGTGCGCGGCCTGGTGCCGGTGGTGGCGTCGAGCG
TGCAAAGGGGAATGTGGGGGACGATGGTGGCGCATGCGGTGCGCGCGGTTCGTGGGATGA
TGGTGGGGTCCCGTACTCCCCTGGAATAGGGCCGTTTTTTTAAACACGGTATAGACGTAC
ACACTTATACATCACATACATTTATCTTTATAAACATATATACACGTATTTCTTATTCTA
TGAACATGATCGACACATCAACTAGATAGCGATGAAGCCGTCAAAAGGTCCGGAATAAAT
AAATACTAAAATGCAACCATCAATATCAGGTTTAGGACTTGAACCCTTATGTAATAAGCA
GCGTTGCTTGACTATGCAAAACTAGCGTGATAAGAAAGTTAAGGGTAAATGAGTGTAAAA
GGCAGTTCGTGCTGAAAAGCAATAACCAAAATCCAATTCAAACACATCAACTGAAAAAGT
GCTAACTGGCTAGTGCCTCGGAGTCGACAGGACAAGTTAACGAAAGTGAGCACATGCTCG
CAACAAAAGCTTAGGATGACTAAGTAGGCAGTTTAATGAACACGATCACAACATATAAAG
AGCCAATGTCATGCATGGGACGTGCAAAGGTGGCAGGGAACGGCACACCAAGCCATTCTC
TGCTGTACAACTCCCACCTACGGCGAAGAAAGTGTGAAAGCACGCAGAAAGATGCGGGCC
GGGGCACCGCATCGGTCGGCCCAAATTGCATGGGAACGAACGAACGAACGGCCTCGATCA
TCATGGAGAAGACACCAATATTTTCTCTTGCGAGTAGGGGCACGATTTAACGTACTTACT
CGGCCGTCTATCCCACCCACGACGTCGACCGCAGCGCCGCCCGCCGGAGACGCTGCCTGC
CACCTACATCGATCGATCATCCCGTGATACGAACGGAGCGAGAAGCTTCGTTCATCCATC
CATCGATCCACTGACGCTAGCTAGCATCTTGTCGTTGACGCGTGCAAGTCGTCGCGGTGG
CAGATACAGTAGAATATAGAGAAGGCGCCACGCCGAATGCGCAAGGAATCGATGGAGTGC
GTGCACGACGTACGTCCTACGTACACCGGACGATATAGTACTAGGATATACAATGGTCCC
AACGGCCTGGTGCAAAGCATGCGTGGATAGACAATGGGATCGGTTTGGCCGCATCGTACT
AGCCTCTCTGTCCTACGTCGCGTCGATGAGCTTGCCACCATTATGTTAACACATCGACTA
ATCATGCACGCACAGGATCAGTTAGATTAGATTAGCTAAAGCTCCCGTGGAGTGGTTGCC
TCCGCTGTGTCCTTGGCCGCGTGATCACCAGTCACCTGTATTTTCTAGTAAGTTTCTTCA
CCGAAAGCTGGCTAGCTAAGCTAGCCAGCCAAAGGGAACCGCGTCCAACTCGGCCGATGG
CTATGTCTCGGCAGCCTACTCGATCGGCACAAGTTAGTTTCGCCGTAGCGTCGCCGAACG
TACGGGGGCAGCCTACTCGATCGGGCTACCGGCGGCCGGCGAACGTAAACTCGGCTAGGT
TCAGAGGGAAACCGTGCGGGTTCACCAAAAGGGCAGCGTTCCGGCGCGTCGCAGCATGTG
ATTTCTGTCTCGTAGAAGGAACGGGAAATGGCCCGTGCAGCGTACGTGACGCGCCCGCCT
AAAGTGCATGCATGCGCGGGTTTGGCCGTGTCTGGCTGCCTACGGTGCAGGCTTCACTTT
CACGAGCACTGCGTATTTCGGGGGAAGTTTTGTTAGGCCTCACGAGGTTGATTCCTCAAA
AGAAATGGTGCACGTGTCACAAAAGCCAAAACGGTCATGTGGCTCCCATGGTTTCGCTTG
CTTTTCTACTACGTACTAGGATGGAATTAATGCTTTTTAGGATTGTTGCTATCCTTAGTC
ATGGGGAAACAGCTAGTAGCATGGCAGGCCCCCTAATTAACCAGCCGAACTAAAGCGGCA
GGCAGCGGCAGCGCTTATCTTGATCTCGGCATTTCCATCGTCCATGCACGACAAACGTGA
TGCAACGTATATATACGTTCCTTTTTTTTTTTTCATCACCCAGCGCACGCGATCAACGAC
GCGGCTCCGGGCGTCCATCCGATGCGGATCGACGGATTCGGGCCACTCATCCCGCTAGCC
GTTGCAGAGGGTGTTAGATGACAGCCTCTCGAAAACGGGCAGGGGGAGACGGTTGCTGGT
CGTCGCGCCAGCGCGAGGACGCCCGTTTTCGAATTCACGCACGCACCCACGGTTAGTTCG
CCACCTTTGCCCCAGCCCCCGTCCCCTCTCCGTGCCGATCGCGCGCCGCATGCCAACCGC
CCACGTTTTCCATCACGCCCCGGCCGTCCCTGGCCGTCGACATCGGGTAGCCACGCCGCA
CCGCACCGCGGAAGGCTTCTTTCTTCACCCCCTCCCTCAACTGCATGGCAACCAACTCCT
CGTCTCGTCTCGTCTCGTCTCCTGCCTCTTGTCGTGTCCACCTATATAACACGGGGGTCC
GCGGCGGCCACGAACTCAATCGATATCGAACGGCGTCCGCGGTTGGAGCAGTGCTTAGCC
AAGGCCATTGATCGCCACCGAAAACCTCCCTCTCTCTCTCTCTTCTCGGTTCGCCGCGCC
TCGCCTCGCCTCGCCACTAGTCCCATCGGATCTGTCCAGCTGACGATGCCGCCCATGGCG
AACACGACGGCGACGGACTCCGCGGCGCGGCGCTTCGCCGTGGCATGCGGCGTGCTCAGC
CAGTACGTCAAGGCGTCCGGCGTGGCGGTGCCGATGGCGTCGACGGGTAGCTGCGGGACG
GAGCAGCGCGTGATGGGGGGCCTTGTCCAGGAACCCGGCTCGCCGGCGGACGGGGCGCAG
CAGCTGACCATCTTCTACGGAGGGAGGGTGGTGGTGCTCGACGGCTGCACGTCGGCCAGG
GCCGCCGAGCTGATCCGGTTCGCCGCGGCGGCCGCCTCGCAGGGAGCGCCCGTCGTACAT
GCGCAGGCGTCGGCTCCCGCGCCGGCGTTCGTCGACATGCCGATCGCGAGGAAGGCGTCG
CTGCAGCGGTTCCTCTCGAAGCGCAAGGACAGGTCCGCCACCGAGGTTCCTCCGCCGTAC
GCGCACCGCGAGGAGGCGCCGCGGCCGCCGCCGGCGAAGAAGGGCAAGACGGAAGCTTCC
TCCTGGCTCGCCCTGGGTAGCTTAGGGGGCATGCACGCGAAGTGATCGCCTCGACATGCA
TGGCAACGTCGGTACATCGTGCTCTGATCAGTGGGGAGTTGAATCAACCCTTACTACTTC
CGTAGCACGGTGCTATTAACATCTACTCGTAGTAGTAAGTAGTAGTAATACTATTGATCA
ATTCAAGCCACATGATCGTGGTATCCATCCATTTAACCCATGTTTATGTTTCTTAATTTA
TTTATGTTGTATATATGAACCTTGTGTTGCCATGTTGCGCGCCTCATATATACGGGTGCG
CCGTTTATTTTATTTTAAATTTTATGAACAATGAATTTGTGCAAACATTATTATATATAT
GGAATTACATACAAGATAATAAATGGTACAATCTTTGTATAAAACCACTAATCATGATGA
AATTGTTTCTATGAATGAATTTCATGAACTCTGTGTCACATTCAGAAATATTTAAATTTG
TGATAGTTCAAATAAAGTGAAAAAACTCAACCATGTTAAACACGTGAAGGAAAAGAAATC
GTACACACTTCATATGCAACCACTAAGCATGGCCGAGAATTCACGAAATGAAATTCATTA
GAAGCCCCAAAATAAGGTGTTTCCCAACGTGTGTTCTTCTATATGATACTAGTGCTATGT
TCTTCTATGATACTAGTGCTATATTCACAATAAGGTCGTCCTATTCGTCATCTTGGACGA
GGAATAGTTATTCTTCACTTTTTATATTTGGTAAACGTTTTCCGACAGTGCGCCGGCCGA
AACGTTCGGCCGATCGCGTGGCTGGCGTTGGATCGACCAGATCGCGCGTGCCCACCGCCT
TCTCCTTTCCTCTCCCCCTTCCTCCATCTCCTTCCTCCTCCCCATCCTTCTTCTTCCCTC
TTCTTTCCCCCTTCCCCCCTGCAACCTCAGGCGTTGTCGGCGAGTGCTGCGGCTTCTCCA
CCGGCAGCCGCTGCGCCTGACGGCGGGGATCTCG
