Contig Data
morexGenes
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Map Locations of contig_43489 (4658 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_43489

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59327 2 2558 bp AK369485 Available Available None





CDS Structure of MLOC_59327






Contig Sequence (4658 bp)

>contig_43489 4658 assembly3_WGSMorex_rbca.fasta
ATGGATGCATGCATGCAAAAGAAAAATAGAAGGTGGCACATGGATTCATACATGCATAGA
AACTCTCATNNNNNNNNNNNNNTGGTCCCACATGGAAGGTTACAGAAAGGGAAAGTCCTA
CACTTGCGGCATTACAGGAGGGCCGACGACGGAGAGCGGAGGGCGGACGATGGAGAGGGG
CGAAGGGGCGATGGCAGAGGGCGCGGTGCCGTCACTAAGGGAGGAAATTCGCAAGCTGCC
CCTCGCGTCTGCTCTTACAAGCGTATTGAGGGTTTTAGGCGTGTAAATTTGAGGATGGGC
CGGTCCAATACCTGGGTAACGAACGGGCTGTGGGGAATTTTAGGGATTCTTTTACCGGGC
CTGTAAAATATCCTAAATAACGTGCAAATACCTGGATACCGAACGAGGCCTGAAGTTGGG
GGAAAGGAGGGGGCCCACCCCGGTGAAAATTAGGGGATGTTAGGATTAGTTAGAAGATTA
CATAGACATGAAAAAAAAAAGATTTTCGAAGGTTAGCTTTAGGAAGATTACCTAAGGATT
CGTAAAGCTTTAGGTAGATGTAGTATTTTTGGTCAACATTTCTATGCCAAAAGAGACTCC
ATGCCTACCGTATCATGCTAACAACACAATCATCAAGGTAAACTTTATTATATGCTGCAA
TTAAAACTGTTTTGTTTCACAGCTTTTACAGGTTTTGCAGCATTACTTGACAAAAATTAA
ACTAGTTTTATCCCCGAATGCAAGTACAGCAAGGACCCCGCGAGTGCGACGTACACGGAC
GCGGTGGCAGCGACCGCGGTCACCAGCACAAGGAACAGGATGTAGGGCCTCTTGCTCCAG
TGCCCCATTATCCCGAGCGCGAACGGGTAGAGCAGCAGCAGCATCCACACGTTGAAAACA
AGCCCGCTCGCCGCCCCCGCGACCTGCGCTGCCGACCACCGCCCAACGATCGCCTTGCCC
GCCGCCGCGCCGATGGCGGCCACGTTCACGGCCATGACCACCACGGTGGGCACCAGCAAC
GGCACCCACTGCACGTCGTACAGCTCCGCGAGCCTCTCCCTGGCGCCCCCGTGAGCTTCT
TGGCCGTCAGCTTGAAGGACACCCCCTTTATGCCGAGGGACCTGAGGAGGATGTGCAGCA
TGGCCATCGGGTACACGCCGGTGGTGCCGATGATGTAGAACTGCTCGTTGCGGACCCAGT
CGAGCAGCGTGAGGCCTGCCCACCTGATCTCCACCATGCCGATGAGCTCCACCGTGGCGA
TGACGACGACGACGAAGAGCGCGAACGTCTGGAACGGCCTCTGGATGTAGAACTCCCCCT
GGAAGAGCCACATGACCGGGTAGAAGTAATACATGAGGATGAAGAAGGTGGAGACCGGGT
AGGTGGTCATGTTGATGTAGGCGACGCGCTGCATGGGGTGGAGGCGGCGGCCGGCCAGGA
GCGGGCAGAAGCGGGAGAAGAACATCTCGAGGGATCCCCCCGACCAACGCAGGATCTGGT
ACAGGCGCTCGGTGAGGTTGATGGGCGCCGTGCCGCGGAACGCGTCGGGCTCCATGGCGC
AGTACGTGGAGCGCCACCCCGTCCGGTGCAGCCGGAAGCCGGTCACCACGTCCTCCGTCG
CGATGTTGTACACCCACCCAACGTCGTTGCCCCACTCGGTGCCGTCCTCGTACGCGCAAG
TCATCGCGTCTGCGAGCTCCGCCTCGCCGACTGTCGCCGGTGACGGGACGGACCGTTCTT
GGTTGGCGGCCGCCGGCATTGAGTTGATGAAGGACGTAGACTTGCCAAACATGTTGGGCC
TGTGCGAGGCCTTGGCCTCCTTGGCGTCGTCGGACCGCCACCGTGGAGGGTCGGCGCTGT
AGAGAGCGACGCGGCGGAACATGCATCCGGTGCCGACGAAGGAGGGGCCCTGGATGCCGT
TGAGGCCGAGGAGGGTGGCGTCGAAGAACATGCGGTTGTGGTTGCAGTAGCGGTCGGTGG
GGTCGACGTCGTCGAAGCGCTGCGGGAACTGGACGAAGGCGGTGTCGGCGCCGTCGCGCG
GGTCGAGCATGAAGCACATGGCGGCGCGGAAGGCCTGCGAGTGGTTGATGTAGTGGTCGC
CGTCGAAGTTGATGATGAAGGGCGCGTTGGAGAGCAGCGCGGACACGCGCAGCTGCACGT
TCATGGCGCCCGCCTTCTTCTGGTGGTCATACCCAGGCCGCTTCTCCCGGGCAATGTAGA
CCAGCATCGGGAGGCGCACGTCCACGGCGCTGAAATCCAGAGGGTGGTCGGAGCTCGCCG
CCATTCCCAGCTCAGGATCCTTGCTAGGTTGATCCAGCATAACCTGTAACAATCATCACA
TAACATGTTGAATTAGGCCTTGTTTGGTTTAATAAGTCAGGTGACTTAAAACCAGTGACT
TATAAGTCGCGTCTGTTTGGTTGTCGTCTGTTTGGTTGTCATCTGACTTATAAGTTAGCT
TTTCATGCAAAAGTGGGTGACTTATAAGTTCAAGTTGGGGTGGAGCAACTTATGACTTAT
AAGTTAGGGTGACTTATAAGTTGGGTCTGTTTGACAAAATAAGTCACTTTTTACAATTTT
CAACTTCTAAGTTGATGACTTATTTGAAACCAAACAAAGCCTTAGCAACAGTTTTACCTT
TCTGTATAAAAACATTTGCGTGGAAGTATATGTATATTTAATTTGTACCTGAAGAATTGC
AGGATGGTGTCCTTTCCGGTGGCCCTTGGCCGGCTTGATCCACGTCCCCTGCCATTGCGT
CGACCCATCGGCCATCCAAGTCGCGTTCCCACACCCTTCTTTCTCGTTTGCAGCGCGGTT
GCACGCCTCGGACCGCTGCTCGATGACGGCAGAAAGCCCGTCCAGCCTCGCCTTGAACTC
CTCATACGCCGCGCGCATCCTCCGATGGTCGTCAAGGAACTCCTTGGCCGCGCTGCCGGC
GTACTCCCCGCGCATCTTGGCCCAGAAGTAGCTCTCCGGGGCGCGAGGCTCGACGCAATG
CTTCCGGCAGAACGGGACCCACGACGCGGCGAACTCCGCCGTCAGCAGCAGCCCCTCGTA
GTGCACCAGCGACCCGCCGTCATCGGAGAAATAGGTGGCGTACTTCTGGACGGGGTAGTC
GGTGGCCAGGATGGAGAGGATGGAGTTCATGGTGTAGAGCATCGGCTCGTCCACCGGGTC
GACGGTGTTGATGAACACGTCGAGAAGGGGCAGGTCGGAGCCGCCGTCGGGCTGGTCGAG
CTGCTCTCTCAGGACGGAGATGCTGGGGACGCATTTCCTGGGCTTGAGCTTGGTGATCTG
GTTGAGCAGCCAGGTGACTCCGAACCAGAGGTCGCCCACGACCGAGATCCACCACAGCCA
CATCGCGTCCGAGTCCCGGTGCCTCATGCGCCACGTGAAGAATAGAATAACCACGATAAC
TCTGACCAGAGTCAATAACCTGCAGTTACGTTTGGACAGATGAATCATGAAACGATGTAC
TGATGCGAATTACATATGATACTGTAATTGTGGTTGAGCTCACGTGCTCTTGGATTTAGA
TACTAGTAGCGCTTACTATTTTTAGCACTGGCTACAGATCAAGATCCTACAGATACATGT
GCAAAGTGAATACTTGCACAGTGTACATTCTAGATTTTTGCCTTAAAATCCTTTTAAAAT
CTCTTAGCCGGATCAGGATCTGAGCGTTGAGATTCGCAGCAACTAAAAAATGGATCTCAG
CGGTCGGACATTCCGCCACATGCTAATGCTAAAATATAAGTGAATTTCGCCTATCAGCAT
GGAGTAGTAGTTTACTCTTAGCACTGTTTTACCGACATAAAGCTAGATTACTTTTACTGT
GCTCCCGTCCGGATCCGGACACAAGTCACAAAGGTCATGTCCTCTATGGCTTGAGCCGTT
GAGCGTGAGCTGGCGTCGGTGCATCCCCCGTGCCGCACAGTTTATAAGCAATGCAAGTAC
TATTTGGATCGTTTGCAGCTTTTGACTACTTTGACGCTGTCCTCTCGGTGCCTCCAGATC
ACAGCACGTTCTGTTTCTTAAGATTGTACTTTACTGCCTTTGGATCAATTAACTAATGCT
CTGTCAGTGTGCATCAACGTTCAGGCAAGCATACTGTTTGTTGTGTACATTCAGATTCAG
GTATCATCTGGTTTCGTCTATATAAAATGGAGCCGGAGGCGGGGCCCCTTCTGATCGAGA
AGAACATTTAGATCCAATCTGTCAAGAAATACTACAAGCAGTAAGTACTACTAGTACGTA
CCACATTGCTTAGATTTAGACTACGTACGAAGCCTAAGGGTAAGGGTTCGATCAAGTGGG
GAACATAAATCTATGGCGCAAAACAAGGGGGGGGAAGGAACTGAACTGAGAGTCTGAGAC
AATGCTCCCACCTGTAAAGGTTGATGAAGAAGCCCTTGACCCTGAACGTGCGGTATAGCA
GCGGTGCCCGGCCGTCCTGTTCACCGCCGCCGCTGCTCTGCGACGCCAGGATCTCTCTCT
CGTCGGCGGGCACCCAGTACTTGTCTTTGGCGCCGACGACGACGACGTCGGCGGCCAGCA
GTGGGTCGGCTAGACGTCCCCCGCCGACGGCCGCCGGGGGAGCCCGGCCACCGTCTAACT
TCCGATAATGTGTGTTTCAACAAGTTCTTAATGGTTCT