Contig Data
morexGenes
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Map Locations of contig_43476 (5587 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_43476

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59323 2 1734 bp MLOC_59323.1 Available Available LOC_Os11g10510.1, FRAME:+3, EVALUE:0.0, 13111.m01117 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_59323






Contig Sequence (5587 bp)

>contig_43476 5587 assembly3_WGSMorex_rbca.fasta
TGGTAACTAGCAATGCGAGACGCACGGTGTACCAAGGTTCAGGACCCTCCGTGGGAGGTA
ATACCCCTAGTCCTGTCAGAATGGTTGATGAACCAATAGTGTTTACAGTATGCTCCTGTA
GTTGTTCGACGGGGGAGGAAGAAGGAGCAGCCGGCTCGCGTTCTGCCTCTCCTGTATGGG
TGTGTGTGAGTATGGGAATGGCCGACCCTCTGCATGGAGGAGGGCCATGGGGTTTTATAA
TCGAACCCCCCGGCCTACAATATGGATAATAAGTACTAAATGGGGGCCCGGCTGGCAGCC
TCTCTGACTAGCCAGCGGGCCTGTCATTGGGTGGTGGCGTGTGGACACTGTACACGATTG
ACAGGTCGTAGCCGACAACGGTCAGCGGTACGGCCGCCACCACTGTAGCCACACGTATCC
CTCTTCATCGTACTTGGGCTGACATACCTTCGCCTTCAAGCGAAGGCTCTTGTCATGTTC
AAGGGGTCGAGTTGACAGGTGCTCTCCAGTCGGCTGACGGCTAACCATCCAGCCAGAGAG
TAAACGGTCGTGTCCCTAGCCGACACGGCTTGCGTAGCCGGCCAACAGGAGGCGACGGCA
GTGCCCCTAGCCGGTACGGGCTGCGTAGCCGGTCAGGGGGTGCCAACACTTTGAGGATGC
TTTCTTCCAAGTTATGTCGAAACTCTACGGAGTAGGCTTGAGCCTACCCCGGAGTTATCA
CGACATGTGTAGGCCTTCAGTGGTGATAGCCAGGTTGGTTGGTGGTGCCCTTCATGGGTT
GTTTGGTATTTCGTAATTAACAGGACAAAAAACTTTTTCTTTATTAATGAGATGAGATAA
AGCTTTTGCTTCGGTTTAAAAAGAAACCGACGGCCAGCAAACGATCGAGGGACGCTGTTG
TTTTCGCAGTTGGTTTTCTCGGTCGCCCCGGTTTTGGTCGCCAAGTCGGCCCTCTCCAGC
CTCATCGCTGGTTTTTTACTCCTCCTGGCCTACCGTTGACCCGTAGCGCCCCCTGATAAC
GTCGCTACGTTTTCCACATACCACACGGCCGGCCCAATTTTGAAACCAGCGGAGACGCGC
GCACAGCCGCGGACTCCCCTGTTTCGGCCGCCTTCTCCAAGAAAAAACAACCCTTCTTCT
TGCCCCACTTGCACTCCAAGATAGCCTTAGTTACTCGCCGATTCCTCCAGCGCCAGGAGT
ACATATACCCGGATCCCCTCACCTTCGTTCGTCACCAAAATCTACGTAGCAACGAACTGC
AGAAGCAGAAACAGCGACAGAGATCCGTCTTTCTCTTCCAGCGACAGGGATGGCGACCGC
TGGGAAGGTGATCAAGTGCAAAGGTTTGCCCCTGAAATACAGTAGCATGCATGCAGTTAG
TTCCATCTGATTTTGGTTGATGCTTCGAGGATGGAGATCTGAATTGTACGGCTGAGTGCA
GCGGCGGTGGCGTGGGAGGCCGGGAAGCCGCTGTCGATCGAGGAGGTGGAGGTGGCGCCG
CCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTACACTGCCCTCTGCCACACCGACGTC
TACTTCTGGGAAGCCAAGGTATCTCGCCGTTTTTGTGTTTTCCAATTGGGTGAATTGTGA
TGCATCTGTGGCTAAATTAAATCTGTGATGTTGTTCTGCTGGATTTGTGCAGGGGCAAAC
TCCGGTTTTCCCTAGGATCTTAGGCCATGAAGCTGGAGGGTATGTATGCATCCTCTCTGT
CTCTGTCTATGTCTCTATCTTATTCTGTTTCAGTTTTGTTGCTTGGAGGAGGAATCTGGA
ATCCTAAATCATAGTTTATTCTCCCTGGCTTCTAATTGTAGTCATCCTGAGTACTGATCT
CTGTCAGTGGTACTAGATCCATACCTACATAAAGCAAGTGTCTATATTTTTATTGCCAAT
GGGATAAAACATACTATGAAGAATCATGGGAAAACGTCATCCATGACACAAGCTCTCATC
ATAAACTGCTCTGTACAATCATACAGTTTTGGACTGGCTAATCTACTCATCATGTTTGCT
CTGCATAGTTTATCTTTTTTGGCACCTCGTTTCACCAAATAGCTTCTTTATTGCAGCATT
GTCGAGAGCGTCGGAGAGGGCGTGACTGAGCTTGTGCCGGGTGACCATGTCCTCCCGGTG
TTCACCGGCGAGTGCAAGGACTGTGCCCACTGCAAGTCAGAGGAGAGCAACCTTTGTGAT
CTCCTTAGGATCAATGTGGATCGTGGCGTGATGATCGGCGATGGGCAGTCTCGCTTCACC
ATCAACGGAAAACCGATCTTCCACTTCGTCGGGACCTCCACCTTCAGTGAGTACACCGTC
ATCCATGTCGGTTGCCTCGCAAAGATCAACCCCGAGGCTCCCCTCGACAAAGTTTGTGTC
CTCAGCTGTGGTATCTCAACTGGTAAGACATAATAGCTCCTCATGCCATTGTTTCCAAAA
CAAGCACAATGGTTTACGATGCCTCGATATATTGGTTGCTGAGTTGCCATTTTTCTTCAG
GACTTGGTGCTACGCTCAATGTCGCAAAACCAAAAAAGGGTTCCACGGTGGCCATTTTCG
GTCTTGGAGCTGTAGGACTGGCTGTGAGTTTTTCTTCCACGCCATATTTTTGCAGGCTTA
AGAGAATTATGTGCTGTAACCATGCATAATGACTGTATGCTTCTGACATGGGCAGGCCAT
GGAAGGGGCCAGGATGGCTGGGGCATCAAGGATCATTGGTGTGGATTTGAACCCTGCAAA
ATACGAACAAGGTACAGTAATATGAAAACAAGGATGTGCAAATGTTTTTCGGATTGATAG
AACACTGAACCTAACAACATGTACTACATTATTTTTCAGCTAAGAAATTTGGATGCACAG
ACTTTGTGAACCCGAAGGACCACACTAAGCCCGTGCAAGAGGTCTGTTCATGTCCCTCAG
TAAATCTTCAGACACGATAAAACTCACTGTTCAATGATGCTCTTCAGGTGCTCGTCGAGA
TGACCAATGGCGGAGTCGACCGGGCAGTCGAGTGCACTGGCCACATCGACGCCATGATCG
CCGCCTTCGAATGCGTCCATGATGTACGTAGCTTGCAGTTTACCTATATATAATCTGCAC
TCCAATGATCACTCTAGTTTAGAGATTAAAACTGAATGTTGCAATCTGGTGGATGCAGGG
GTGGGGCGTGGCTGTGCTGGTGGGTGTGCCGCACAAGGAGGCGGTGTTCAAGACCCACCC
AATGAACTTCCTCAACGAGAAGACCCTGAAAGGCACCTTCTTCGGTAACTACAAGCCGCG
CACCGACCTGCCGGAAGTGGTCGAGATGTACATGAGGAAGGAGCTCGACCTGGAGAAGTT
CATCACACATAGCGTGCCCTTCTCGCAGATCAACACGGCGTTCGACCTCATGCTCAAGGG
GGAGGGCCTGCGCTGCATCATGAGGATGGACCAGTAGGAGCTGGACCTGGAGAAGATCAC
CACAGTGTTTCTCGCTGTTTTCAGGTTTGGTGCTTGAGAAGCAAAAGACAAAAAAAAACA
AAAAGTTTGAAATCTCCCCTTGGATAATAATGTACTAGTCGCGAGATGTGTTCATCTCTA
TGGTCTTAGAGGGAACGAATGGGTCTTTGTTTTGTGTTTGGTCTCAGTGTGTCATCCACA
GCTTTCAGTTAGCATGTAAATTACTATCATTGTGTACAAATAGTAATCAATATCTTGCAG
CTTCTGTCTTAATTAATGTTGGTGTCTTGCATTGCAGATCAGTTCTGTTATTTTCTCTTC
ACTTTTATTTGCAGCACAAAGTGAGATTTTCACTAAGATTTAGAAGCGGTGCTTTGCCAA
CGTCCTGATGGCTAATGTGCCTGGGAAGATGGCTCGAATAGTGGCGAGTGATTCTAGGCG
GCAACAAGGGTGCGTGATCTTTGCATGAAGTAAATCTGTGTATGGCAACTCAAACTTGCA
CGTCATACTCAAAGCGCGTTACTTGACTGTTGAAACATCCATACATATTGCCCATATTGG
TCACGAAACTCACTTTGGGTGATACCCCCTCCTTCAAAATATGTAAGGTTCCCTTGATGT
TAAGCTTTACCTTTGATCATGAATTTGCCTAATAAAATAGGAGTTATGATATGGCAACAA
TCCAAACTTGTGTACCAACGGCAATTCATGCCATCCTGCTAAAAGTACGAGGGGCAGCAC
GTTGGCCATTTACATTGCAGTTCCTGTGGCTGTGATTCTGGTGATAGTATTGGTGCTACT
ACTTTGTTGTTTCTTAAGACGGAAAAAGTCAGATGAGACTTTGGCATGAACAAGACAACT
CTCGGATCATTTTCGACATGAATGAACATAGCTAAGGTCAGGTTATTCACAGAGCTACAG
CTTGGATTCGTACGTGATCGTTACTCAGACATGTGGACTCCAGAGAGCTTATGGATATTG
GATGCAACCGCTGGGAGACGGTAGCACGGGCTATCTTCAGCCGGTTTGGATGACGGTAGC
ATGTGTTTGTAGAAGACCAAACAATTAAGTATATTGTGAAGACAAAAGGGTGGGTTCCTT
CTCAGCAGCAACAAGACATGATTGATTCTGACCCAGTTCCTGCAGCTCCAGCTCTTGTTC
AAATTGAAGCAGATGCAGAAAATGTACACAATGACGTACATGGTGGTGCAGGTGAAGAAG
ATGTTCCCCAACAGCAGCAAGAGTATGATGCTGAAGTTGATGATCCGGATCAGCACGGAA
GCACCAGCCACGAAGTTCCACCAGCCGCTCCACTCAGAAGATCCAACAGGGGTCGAATTC
CTTCCAGCAGGTATCCCTCGGATCAATACGTGGTGTTATTATCTGACGGTTCAAAACCTG
AATGCTTTGCAGACGCCATGGAAGATGAGCACAAGGAGGAGGGGAAAATGCTATGCAAGA
AGAGATTTTTTTTTAAAAAAGAGTGTTACCTCCAGCCTCTGCATCAGCACGATGCATACG
GTCCTTTTATTAAAATAAACAAACTGATCCCGGTCCAACGTAGTCTCGAACAAAGCAGTA
AAGAAGCAAAAGTAGATCAAAAAGTGCCACAACCGGCAAAACAGGCCTAGATGCCTAACC
ATCTATCCTATTACTAGACCGCCATCCAAAACGGTTGAAGATATCCCGCGCTACCATCTC
CCATCGGGTAGACCCAGTAACCAAAGGCTCCCTCGTTTCCACAGGAGTGAGTAATGACCA
CATACGGATCAATGCAGCAGCTCTGTGAAGTACCTACAAAAAATGTATATTCGTATATCT
GTCAAAAACCACATCATTCCTACAGTTTCAGATAGCCCAAAGAAGTGCACAAACTCCAAC
CCGAATGTGTCTAGCAATAATCATATCAACTCCATCTAGCCACGCTCCAAATAACGTGTC
AATGCTATCCGGAGGTACAATGTTAAAGGCTATACGCACTGTGTGCCAAAGAACTCTCGC
AAGTGGGCGTTGGAGAAAGAGGTGTTTAATGTTCTCTTCGTTATCACAAAAGGTACATCG
AATGCTTGTTGGAATTATGCCCTAGAGACAATAATAAATATAGTTATAATTCCTGTATCA
AGATAAT