Contig Data
morexGenes
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Map Locations of contig_43442 (5074 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_43442

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59295 1 442 bp MLOC_59295.1 Available Available None
MLOC_59294 2 3776 bp MLOC_59294.1 Available Available LOC_Os10g39460.2, FRAME:+1, EVALUE:0.0, 13110.m03615 protein selenium-binding protein-like, putative, expressed
MLOC_59296 1 911 bp MLOC_59296.1 Available Available None





CDS Structure of MLOC_59295






CDS Structure of MLOC_59294






CDS Structure of MLOC_59296






Contig Sequence (5074 bp)

>contig_43442 5074 assembly3_WGSMorex_rbca.fasta
CGGTTCGCGGGACGGAACGAGGGACGCGAGGACGTTCCACTANNNNNNNNNCGTTTATTA
ACGCTTTTGCTGTGCAATCTACAAGGGTACGTAGATCAAAAATCTCCTCTCGTAGATGAA
CATCACTATGATAGGTATTGCGTGTGCGTAGGAAATTTTTTATTTCCCATGCACGTGCCC
CTACAATTATAACAAAGTATTGACTAGAGATAATTTAGCTAAACGTAGAACTGTAGATGA
TCCTACTTGCCTTTTTCTGCACCGAGATGGAGTCTATTCAACACCTCTTCTTTGATTGTG
TGGTTGCGAAGACCGTGTGAAATTTGGTTGCTGAGGGTTTTAAAGCTAACCAGATTTCTT
GCTTCGAGGACGTTTGTGCCATATGGCAATTTCATTAAAAAAGTATGCTTAATATGGTGA
CCTGTGCCTCCTTATGGAATATTTGACGACTAAGGAATGAATTTTGTTTTTAGGGTCGAA
GTTGAAAAAGTCTAAATTGTGTTATCATGAAACTGCGTGATTTTCTCCTACAATGGATGA
TTGTCTGCGGCGATGCATATGCGGGGCTTCTTCTTCAGTTCATCCTTTTGCTGGACCGGC
GTCGTGGGGAACTGCTCCGCATCGCGTGGAGTGATGCTCCTGTTAACTGAAGATTGATGA
TGTTTTTCCTCAGAGCTTTGTTCCTAGCTATTGTTGATCGATGTAATAAAATTTAGCAAG
ACAGTTTAGACTTTTTTCGATGGTTTTCTAGTTAGTGACAGGGTGTTAGATGCTTAATTC
GATGTTGGCCTCTTGAACCTATCTGTTCATTGCTTCATTAATAAAGTTGAGAGACCCTTT
TCATTTCAAAAATAAATAATGTTGCACTAAGGCTTGGAGCAGCGCGGCAAACTAGCTTTT
CCACCTGAAACAGTTTTCCTCCGGTTGCCACTCTCCTGCTCCATATGCTAATCTGCTATG
CACCCGCTCCCCATCCTCGACGACCCGCGCCGCCTCCGCCGGCTCCTCTCGTCCTGCCCG
GCGCTCCGGACACTCACGCGCCTCCACGCCCTCCTGATCGTCTCCTCCTCCGCCTCCTGC
CACCACATCCTTTCATCCTGCCTCGCCACCGCGTACGCCCGCGCCGGCGACCTCGCGGCC
GCAGAGTCCACGCTCGCCACCGCGCCCACGTCGCCCTCCTCCATCCCCGCGTGGAACGCC
CTCCTCGCGGCGCATTCCCGCGGGGCCTCCCCGGACGAGGCGCTACGTGTCTTCTGCGCT
CTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGCGCTCTCCGCGTGCGCG
CGCCTCGGGGACCTCGCCACGGGGGAGGTCGTCACGGACCGCGCGTCCGGGGCAGGGTAC
GGGAACGACATCTTCGTGTGCTCGTCCCTGCTGAACCTCTACGCGAAACGGGGCGCCATG
GACGATGCCGTCAAGGTGTTCGACCGAATGCGGAAGAGGGACCGCGTCACCTGGAGCACC
ATGGTTACCGGATTCGTGAACGCGGGGCAGCCAGTTCAGGCGATTGAGATGTACATGAGG
ATGAGGAGGGACGGTCTGGAGGGAGACGAAGTGGTTATCGTTGGGGTTATGCAGGCTTGT
GCAGCAACAGGGGATGTCCGGATGGGGGCCTCAGTTCATGGGTACTTGCTGCGGCATGCT
ATGCGGATGGACGTCGTCATCTCGACAAGCCTTGTGGACATGTATGCGAAGAATGGGTTG
TTTGATCTGGCGCGCCGGGTGTTTGAGCTGATGCCGCACAGGAATGATGTGTCCTGGAGC
GCGCTGATCTCACAGCTTGCGCAGCATGGGAATGCAGATGAGGCACTTGGCTTGTTCAGA
CAGATGCAGGCCTCTGGTCTTCAGCCCAATTCAGGGCCAGTTGTTGGTGCACTATTAGCT
TGTTCTGATCTTGGACTCTTGAAGCTAGGGAAGTCAATACATGGTTTCATCTTGAGGAGG
CTTGAGCTTGACTGTATGGTAGGCACAGCAGTCATTGATATGTACTCAAAATGCGGCTCC
CTGGCAAGCGCCCAAATGCTTTTCGATAAGGTTGTCTCGAGAGACTTGATTTCATGGAAT
GTGATGATTGCGTGCTACGGTGCTCATGGACGAGGCCGCGATGCCCTCTCTTTGTTCCAA
GAAATGAAGAAAAACGAAGTGAGACCTGATCACGCCACATTTGCTTCTCTTTTGTCGGCT
CTCAGCCACTCCGGTCTCGTAGAAGAAGGGAAATTCTGGTTCAATTGCATGGTTAATGAG
TATGGAATTGAACCTGCCGAGAAACACCTGGTGTGTATAGTGGATCTCTTAGCTCGTTCT
GGTCTTGTTGAAGAGGCCAATGGCCTGGTGGCATCATTGCACAGCAAACCAACCATCTCA
ATTCTGGTCGCTCTACTTTCAGGCTGCCTGAACAACAAGAAGCTGGAACTTGGAGAGAAC
ACAGCAGAGAAGATCCTTGAACTACAACCTGGGGATGTTGGCGTCCTTGCCCTGGTCTCA
AATCTCTATGCCGCCGCCAAGAACTGGGGCAAGGTCAGGGAAGTGCGCAAGCTAATGAAG
GACCACGGCAGCAAGAAGGCGCCCGGGTGTAGCTCGATAGAGATACGCGGAGCACTGCAC
ACGTTCGTCATGGAAGATCAGAGCCATCCTCAGCATAGACAGATCCTACAGATGGTCACG
AAGCTCGACTCCGAGATGAGGAAGATGGGCTACATCCCAAAGACGGAGTTCGTGTACCAT
GACCTCGAGGAAGGCGTCAAGGAGCAGCTTCTGAGCCGCCACAGCGAGAGGCTGGCGATC
GCCTTTGGGCTTCTGAACACCAGCCCAGGGACGAGGCTCGTGGTCATAAAGAACCTCAGG
GTCTGCGGCGACTGCCACGACGCCATCAAGTACATGTCGAAGATCGCCGACAGGGAGATC
GTGGTGCGAGACGCCAAACGCTTCCACCATTTCAAGGACGGAGCCTGCTCCTGCGGCGAT
TATTGGTGAAGGGTGTCTCGCGACACAACCTGTCCGTTGCCCATCAGCTCCGTCTTTGCT
TGGTCTCAAATCTTTATGCCGCTACCATGAACTGGGACAAGGTCGTGCGGAAGCTAATGA
AGCCCGGGTGTAGCTCGAATGCTCGATAGAGATACGCGGAGTTGACTGACTGACGTGGAT
CAGCATATAATAGGTGAGTGCCAGTTCCAGTTGTCCTCCTGTGCAACTGCAACACAGTGA
TTTGATTTTGACCAGATTTCATATATGAAACCGGGATAGCTACCTTTCAGAAAATTTGAA
GGAAGGCTCTAGATCTTTCATGCTTCTCAAGCAACCTGATCGGATTTGACACCGTAGGGA
GGATAAGCAGAATAATAACTGTGCAAACGTCTCTCATCAGTCATTGTCTGCTGAAATAAG
TGGCACCCGAGTGCAGCTCCACAAGTCCACATATGCACTGCGTCTGCGTCGTCACCCCTG
TTGAAATTGTGGCGAGAGTTGTAGGCGACCGTACCTCTGAATACATGACGCAGCGGTGGG
TCGTCGAGGTTTACGGCGCCACGACTCTACCGCCACCACCAACACCAGTCCCGATCGCGA
CGTCAGCACCGCCCGTGCTCGGCGCGCCATCCCGAGCCTTCTCCGCACCGTCGTCAGTCC
ACGCACCGGCCTCGCGATCGTTTCGGTGTGCCTCGTAGCGGTAGTGCCCCGTCGGCGAGC
GTGGCCGTCGCCGTCGGAGTGGCCGCGGGCGTCTCCTGCCGCGGGGCGGGGGAAGGCGAC
CCGAAGCGTGGCAAAGTTTTGCTTTGCCTTGCGTTGCTTTTCTCCGGGGGTTCGTCTTGT
GGACTCATCGTGATCGCTACGAATCTTGACGTGGGAAGAGGGTCCAGATAACGCTGGCTG
GACTGTCGTGGCGTTCGTTGGAGCTGCTAGTTGGTGAGGAAGAGGAACGCTTGCTTGTGA
AGGAGTAGGAGTGGCGGGTCGGATGGACCTCACCTGCCCCATGTGGGAGCATGGCCATGC
CGCTCGCTGCTCGAGGCTGCTAGGCTATAGCTATAGCGATTCAACTACTAGCAATTGGGC
ATCCGCTGCTCATGATTGGGATCGTTTTTCCGCTTGATCGTGCAGCTCTGGTTTGGCCCC
GTCGTTGACTTGCCGATGAGTGCAAACTCGCCGGCTTTCGCACGACGCGGAATTTCGCGT
CCGACTACAGCGCAACTCCTTTCTTCAGAAGATTCGCCGGTTTCATTTCATTGCAGAATG
AAACCACATCATTCGAAAATAAACATTAATATCCCCCAAAAATGAAATTAGAAAAAAATC
TTAATCTCTAATTATCTTGGCGCGTCCACGTGGGCCTTTTGAGATTTCCAGCTGGTCGAC
AATACCCGCGGGAAATTGCCACGGGAGCTTCGCTACGACGCATACCCGCCCGCCATTAAC
AATCGCAACCTGCCAATACCACCACCCTCCCCTTTCGCTTCTCTCGCGTCTCGCCACAAC
TTTAATTCAGCGGAAAAGGCCCCTTCCAACCACCGGCGCTGGACGAACGTGGGCGATGCT
CCGGCCATCGCCGTATTCCTCGAGGCGTCTCCTCCAGAGCGGCGACCCCGGCCGCATCCC
GGGAATCCCCCCGGCCGATCCGCCCGCCGGCGTCAGCTCAGATGTCGTCGTCATCCTCGC
CGCCCTGCTCTGCGCGCTCATCTGCGTAGTCGGCCTCGCCGCCGTCGCGCGGTGCGCGCG
CTCCCGCCGCAACGCCAACGCCAACGCCCACCCCTCCTCGCCGTCCGGTAGCCCGGCCCA
CGCCCTGGCGGCCTTCGGCGGGGCCGGCGGCGGGCATAACCACGGCGCTACGACTACTAC
GACGACAGGAGCGTCCGGGGGCAGCGTGACGACCACCATCAAGGGGCTCAAGAAGAAGGC
GCTCAAGGCGCTGCCGAAGCTGGCGTACGCGGACGCGGTGGCCGCGGCGGCGGCGGCGAG
GGGCGCCGTGGCGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGCTCGCGGGGGGGGG
CACCCGCCCGGGGGGGGTGGGGGGGGGGGGGGGG