Map Locations of contig_43263 (10908 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43263

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59094 4 2868 bp MLOC_59094.1 Available Available LOC_Os02g45110.1, FRAME:-3, EVALUE:0.0, 13102.m05056 protein MT-A70 domain containing protein, expressed
MLOC_59093 2 379 bp MLOC_59093.1 Available Available LOC_Os02g45120.2, FRAME:-2, EVALUE:3e-28, 13102.m05059 protein expressed protein





CDS Structure of MLOC_59094






CDS Structure of MLOC_59093






Contig Sequence (10908 bp)

>contig_43263 10908 assembly3_WGSMorex_rbca.fasta
TCGGTCGGAGGCGGAGTCGCCCCCGGTGTCACCTGGGGCAGCGACACGGGGGGAAGGGAT
AAGGTTGCGTCAAACTTACTTTTAAAATTAGCCCCCTTAGGCAACGACAAAGTTGGAGGC
ATGGCAAACGAACACTGCTATGCAGATGCCCTAGCTAACATGTATGCACAAAGGCATTAA
ACTTAGGAGTAAAACATATTACTAGTCCCCAAATTTGACCGGCAAGTTCAAGTAGGCCAC
TTGAAACCTTAAATTGCATATCTAGGCCACTGAACTAGTTTAAGTGGATTACTCTAGGTG
TCAACCAGCTTGGCATGGCACATTGACTTGTGCCATCAAGGCATGTCACAGCAATCCATT
CAACAAAAGGAAACAAAAATCACTCATCATATAAAAGGAGGTGGCTCACACCCACCTCTT
AAGGGCAGCTTATGTAGCTTCCATCCATTACCAAAGCCACTATCATGGCCATATACTTAG
CTATTCCATGATCTTGTTGGGTCCCTGACACACAGAAATCTAGAAAAGGCCAAAACTCTA
GGGTAGCTGAGCGCAAATTACAGTGGCATGCCTGTCATCAGGTACTAGTCAAGCGGTGGC
ATGAGGCAACATGCCACGTCATCTCATCTGTCACACAGAGGATGAGATAATAATTATCTA
GAGAGAAACAGTTCAAAGAAGTTTAAAGATCTAGACCCGCAATTTGGGAGTTCGATGACC
CAAGTCGGTGACCACAGCGAGATGTACTATTCCTAATGACAAGTGCAGATTTGCCTGGGG
CATGGCAACAAAACGCAGAAAAAGGTGATACAGGGTGGTAGCTGGTAAGCAAGTGTCATT
CTTCAAAATAAGCTAGGGTGTGAACTTTAAGAAGAAAAAACTGTACAGAAAAAGGTTTCT
AATGAAAATCTCCTTTTTCTGAATAAAGACCGGAAGAAGAATAACGATTGATGATCCCTA
AGTTACGCACAAAGTTGAATCAAGAGCAAAGAGGTATGGACCTAACATAGGTCACATCCC
TCACGACATAAGATTGGAAGTTGCAAACTCCAGCTTCGAAGCTGAAGTGCTTTAGCCCTT
TCGTTTTTAAGCAAGAATCGCCTTCTTGAGCGCCCAAGAACAAGTATGTGCGTTAGATAG
ATCACACGCACATCACGCATATAACAACTAAACATGGCCTCAAAACTTACAAAGGCAAAA
GATGATTCCACATTTTTTCAGCCAATTCTCCGAAATTTAAGTCGTACTTACTAACCTAAG
AGCAGATACGTATCAGGCATAACAACTAAACATGGTCCTATAAATAAAACTAACAAAGGC
AAAGACAATTCAGCATTTTTTCAGCCAATTCGCTGAAATTTAAATTGTACTCCCTCCATA
AACTAATATAAGAGCGTCTAGATCACTATTTTAATTATCTAAACACTCATATATTAGTTT
ATAGAGGGAGTACTAACCTAAGAGTAAGAGCACATACGCCGAAATACTTCCATGTTCCCA
ATAGCTAAGCAGAAAAGAAACCTTCCCAATAGCTAAGCAAAAAAAGAAGGTGAAGAGCTC
ACCCTCAGTCTTGGGGGCAGATTGCTTGGGCTGACCATCAGCGTTGGGCTCACCGTCAGT
CTTGGGGGGCGATTCCTTGGGCTCACCCTCAGTCTTGGGGCCAGATTCCGCGGACTCCAC
CTCCCTCTTGGCCAGCCTCGCCTTCTTCACGATCTGCGCCAAGCGAGGGCCACACCGACA
AGCAAGTCAACACAACTCGATCGAGCGGCACCAGAGTAAAACGACGCGAGGGGCGATCGA
GGAAGCGGAATTGGGTTTGAGGGCAGACCTTGTTTTTGATGGGGCAGACGTACGGGCAGG
TGGGGCAGAAGAGGCGCAGGCGGTGGCCGCCGGTGGCCGGCTGGATCTGCAGCAGCATCC
CGCACGCCGGGCAGAAGTCCATGGCCGCTTTGCCGCACTTTCTCTGCCGCTGTGCTCAGG
GACAGTCGTCGGGGCCTCGGCAGCTCTGCGATGAGCGAAACCCCCACTAAAACCCTATGA
CCAGGGTGGGTGTTCCGAGCCCATTAGTGTTGGGCCTAGCCTGTGAACGGCGGTCGACAC
TGGGGCCCACATATTTTGTACATGGAATTAATGGGAATTAATTGTGCTCCGTAATTTTTG
GACCCTCTCATTCAATTGATTGACGTGTTCAACTTTGAATTTGGTTCACGATTTTTAATC
TGGTCAACTATTTCTCACATTCAGGTCAGATATCCAATTTTGTATTCGATTCATGATTTT
AACTGGATCAAACAATTTCTCAAATTAATCGGCAGCAACCAGCATAGTTCATTTTTTTGC
GAAGAACCAGCATAGTACATGGGGCCACGAACACACCAAATTTCTCCACAAGAGTTTTTA
TTGATTAGTTGATGACACAGAATCACACAGAAAAGCCTATTAAAACATTGCATTATTATA
AAAAAGACACCTCGTCATCTTTCTCACACGTCAAACACATTTTTATCCTTTTGAAATCTT
AGGAGGTGTTTGGTTCGTCAATTTTGGCCCGTAACCTGATTACACCATAACTTGAAAACG
TTACTTGTGTTTGGACCACATGGGCTGTAATCCGTTTCCGTGTAATCCAATTACATCGCT
ACTCACCGCCGATACCACCCACCCTTCTCCGGAAACGGTTTCCTTTACTGGCGTATTCTG
ATTTCATTATCATTTACGTTACAGTTTCTGAACCAAACACCTCCTTAATAACACCACCAA
CACAGCGAAAGGCACCTAACCCTTCTAGTTAATGGAAAATTTTGAGGGCGAAATGCAAGA
GATGATTTTTTTCATAGTATAAGATGAGCAAAATTTCAATCTATCCCGCTTTTTTTAGGA
ATCATTGCAGAAGAGTTCTCCCGCCTGAATATATATTACTGAGAAGTGTCATGCCAAGAG
AGAATCACTCTCTTGTTTGGCTAATCCAGTCTATAAGAAAAATCAGATTTAAACCCTAAA
TAAAATGATTATTTATGAGGAAAAGTGGGTCAAAAACAACGCATGGATTAACCATGTAAG
CATGTAGTAGGTGGACGAGGGATGCGGCACTGGTTATGTCAAAAGCACATATACATGATA
GCACAAGCGAAAGAGAGGTAAAGCACGTATACATGATAGCATAAGTGAAAAAGAGAGGCT
GAGGAGGCAACCTCAGCGAATGAGCTATGGAAGCATCACATAGGTGTGATCTCAGCCTCC
ACCTGAGAAAAAAATTATAAGGCCACCGTATGAATATTTCTCATCAAACAAACATAAGCA
GCATCTCCTAGTGGTTCACCTATCTCTCCAATAACTTACATTCCATCCAAACAAATACAG
TTCTTTCTCCTCATTTCTTCTTGCTTTTTTGGTGAGGAAGCCGGTTTCTCTGCAAGAGGT
CGTTTGGTTCTGCAAGCGACCGTAGGTCCACCCTGGAGCAACGATCATGCCCTCATAGTT
CGCCGTTGAGCACTATTTGGAACGAAGCGACCAACTACATATACACATTGCAGATGAACC
CTTAGCTTTATATATCAAGTTTCTTTGTGGACAGTGTAACTATTATTTGATTACCGGTAA
TCCAGCCATGATGACCGATCCCTAATGCTTCACGGCCAATCAAGCTCGCATACGGGTGAA
CATAAATTTGATGTCTCAAAGAAAAGGAAGCACGAAACTGAAATTCACCAGGCATTTGGT
CATTCTATAATGAACAGACAAATCGAGTGTACTGATGGGCTTAGACCGGCAGGCATATTG
CTGATATATCAGTGAAGGCTTACACTCTGCTCCTTCACCATCCCATGCCTTGCCTATTTC
TACAAGTACAGCAGTGACAAGGATAACAGGTGACAAGAACTATGTAGACAAACAACAGTA
GACCCTTGCAAGAGCAGTCTCATGTACCCAGAGGGTGCCAAAATCAGGCTGGCCGCTCAC
CGTCTGATGCAACAGGCTTCTGTGACGGAGTACTCTGATCAACATCCATAGGCGCGGTTG
CTCTGGGAGGTGATGGCGGCTGCACCTCGAAATCTGGATAAGCAGCTTTGTACCTTGCCC
TCAGCCCTTCATCCACAAGCCTTGTTCCGCTTACCTGGTTGCCAAGAGAGAGCCATCTAA
ACAGAAAAGGATACAAAAAGGTAAGTGCATGGGTAGCATCTGGTATGCCGAAGAAATATA
TAAGAGGGGAGAGATGCGCACCCAGCTTGTGTGTTATGCATTCTAGCAAACAGTTCGAGC
TTCCTTGTCCTTGGGCTTATCCGCTCTAGCATGGCGTACATCTGTACAGCAAAACAGACT
TGAAGCAGTGTTCTTGAAACAAAAACTACCAGAAGGAATTAAAAAAAATTACTCCCTCTA
TAAACTATAGTGATCTAAAACGTCTTATATTAGTTTACAGAGGGAGTACAGGTTTTTAGC
TGTGTGGTTTGTATTAGATGTCAAGTTAGTACATGCATGTTTTACTATATGGGATCCAAA
CCTGTGTATACGGATCTCTAGGTAGAAACAACAACAATCTGGCAAAGCTATTGCAAGTTA
TCTAACTACACAGAAACAACTGAAGAGGCATCACTTGTTCTGAAGCAGCTAGTATGAACC
ATTGAAGCCGATGTATTACCTCGTCGGGTTTTCTGCTTGTTTCACGCACTTCAGCAACAA
TAACATCAGTGTCTATATTCCTGTTCACTAGGGGACTCCCTTTTATTCCAACAAGACAAT
GTTCTTTACTGTGGTTCAACCAATGGCCAGTGCGGCCAGTACGAATAATGCGTTGAAGTT
GATTGGTCTTCACCCAAATAATTTCCTCAACACGCTTGTATCCCCAGAGCTCCAAACTGA
GGAATAAAAAGGAGGTACAGTGGATCAATGAAAACAACCATTTTCCAAAACAAATGTTTA
ACAGAAAATAATTAAATACCATTGAGCCCTTCATAGTGGACATTAAAAGCAAAGAAAGAA
TATATATAATGCAGAATATCAACTTTGGCAACTATCATCTGTTGAGTTACAGGTCTGAAG
GGTCACAAAAAGCTACCCAATGGAAATAGATTTCATTGGAGTGAAAAACATTGTCAGAGA
GATGTTACAAATATGAAGCATGAAGAAAATCCAGCCAAATGGCAATATATTTCACTCTCC
TAGCAATTTTTCTGAAGAAAATTAAAGGTTTGGAAACTTACCACTCCCGACCAAGTTCCA
TCGCACGGCCGGTGACCCATAAGAAAATCAAACCATCCGTTTGTAAAGCAGGCACATTAA
GAGTCCTCATTTCATCGTCAGCCATTGTGCCATATGGCAGTTCCATATGAATATCCCACG
GAGGATCAGCCATAATTACCCCAAATTGCCCTAAGATGTCCATTCTGAAGTTCCGAATGT
CACAGTTTATCCATTGTGACTCTCCAAGCTCTATTTCTGAACAATATTCAGCTCTATGGG
GCTTTATTTGCCTAGGAGGAGCAAGGGTGCCAGCCATCATTGGAGCTATATCTGGTGTTT
GATCAAGCTCATAGTGGACATACTTGCAAGTCTACAATTGCAGAATGCATGTAAGATAAA
ACAGGTGCACAGGAAGAGATTAACATAAAACGGTTTATGCCTCTATGGCCAACCTTAGTG
TGGCGGCAGGTGTCCAGAAAAGAGCAATCTCCTAGATTTGTATCAGTATGTAGAGCAATA
ATACGGCGAAAGTGAACCTGCTCAAAATAAAAGAAAAAGTTGGACACTAATTATCATTAA
TAGCTAAAACATATCTACTGAAACCAGTACAGTTTCCAAGCATAGTATAAAGAAGATTTG
TATGAAGATATTAAATTGAAAAAATCATATGGTATTATATTAGCATCTCTCAACTGAGTA
AACATTTAACAACTATATTACTTTCAGTTCAAAGCCATGTGTCAAATTGCTTCTTGACAT
GGATTTGGAGCAATGAATGGCACAATTATACCCACGCCAGTTCAGTTTCAATTTAATGAA
CCAGAGGAAAGCTAAAAAGGGTAATTTTCACATAATGAGTTTCATATAATTTTATCTTAG
AGGAAGAATAATTGTGGCTTAGCACTTTTACGTACTATAGACAAACTGCAACCTGAAAAT
GTAAAGAAGAGATTACATTAACCATACCAGATAGATGTTTGCTAAAAAGAAGCAGTCTGA
AGGCCAGTTACCCACCAAGTTGTTCAGACAAATAGACAATAAAAACAAATATGAGGAAGT
ATACATTGAGTGGGCAAAATGAGTGTAATAACATTGACCTTAGCACAGGAAACAAAAGAA
CCAGATTGGCGTCTGCAATCTTCTTTAGTTAAATTGGTGCAATACTCCTTCAGCTGGGAA
CCACCCTTTGTTTTGAACTGCCAGATACAAAACCAAGGTTAGTAAAAACTAAAAATTGAT
GATAACCAAACGGCAGAAGATGCCAATCAGACAGAATGATTCATTGTGAATCATAACACA
ACTTAATGCACGTTACAATATGTGAAAATTACTGTTATTGGGTTTGCAATATGTGAAGAT
CATGCTGGACGTGTGTAACACAAACAATGTTGCTTGTCTTGCACATTTATCCTCAGTGCA
GTAGACCATACAGTGGCTAAGCAAACCAATTCATTTACCACTACAAGACTAGCAGCAGTG
CCGGAGGACCTTGGAGGATCCTTGCTAATTCCATTCCAGTCACCTTTCCACATGGTGTTT
AAAACAGAACGTTTTGGCACCGGGGTATTCCCGTGTACCGTTCTGGCCTTCAATAATTAA
TGTCCAATTGTTTTATATCCGTATAGATTCAAAGGCGCATACGTTAAAGCAAAAAAGGAT
AAAAATGGAATGGACGAAAGAGGCTAGTTGCGGTCAAGTCTAGCATGTATTGCTTCCAGC
CAGAGCAAGCCAACCCATACTTGCAAGAATTAGATGTATTATACGTTCAATGTTTGAGGA
AAAAAAAACATCTGCCCAACATTATGGACACATCGTGGAGACAGATAAGAGAACCACGCT
GAGCTGATACAGCAGAGCACAAATTGCTGTTTGTCCAACGATACCAGTATGAACTGCATG
GTAGTTTTTTACCGGAATTATCTGCTTAAGCCGGTACCAGCACAATAGCTTCTGCGGACA
GTTTTGGTTTGGAGAATGGAATGATCTGTTAATTCCAGCCAGAACAGAACGAAATTACCC
CGCCTCCCTTCCCACACGTTTTCCTTGCCAGTGTCTATTTATTGCCAAGCCTACATGTTT
GTGCTGTGCCTATTGTCTTAGCTCACCAGTCTCAATTCTCTACTAACTAACTTTTAACTG
TATTCCCTAATCCCCAACATACATGAGCACCGTTTTTAGGACTTCTTCATCCTCATCTTT
GTAGCACTCCCATTCTTTCTAATGGCCAAGTATAATAGTTTGTGAACAGTTTGCATATGT
ATAGCCATTCTCTTATGATTTTGTCGTCATTATACCAAAACTTCTCCATAGGTTTAGTAT
TTGCATAGTTTGCTTAGACACTAGCGAACATTCCAACAATATAACAATACACTTAGTCAT
CTCAAACTACACAGAACAATGGCACTGCAAACTAACACCTCTTTTGCCGCTGGAGGGTGA
ATAGGAACAAACCTTTGCTGCAACAGCCGTCTCTTTTGCCGTTGGCCGGTGAATGAGATC
TAGCAGCTCCTCCCCAGTTTTTGTGTTCTGCTTCTCCTTATATGTCTTCTTACTAAGCAG
AACCTCGAGGTCCTTCAGGTCCTCCTCCTCGGTCCTCTGGTTCTGCTTGGTAGGACTAGG
CCCTGAGCTTGGAGCCATGAACGGGCGCTGAAGTGGCATCAATCCTGGCATCATCCTCTG
CATCCCCGGCATTGTCATGCCCCTGGGCCGTGGGAACATCGGTGGCATTGAGTGCGCCCA
CATATCCGGCTGTTGCTGCTGATGTGGTGGTGGTCTTGGTATGGTTGCACTGTTAGTGTC
GGTCTCGGACGATGTCGCCTGTGGTATGGGTGGAGGTTGAGGTGACAACAATGTGGCAGA
TTCCGGTAGCTCTTTGAGGAGCTTGCTACGGTCGATGGCCCAGACCATCATCATCTGCTT
GCCTCCAATCATGGCCTCCTCGATCTGCACGCCGCCGCTGTCCTCAGCTATGCGTCGGAG
GGCGAGAGCTACAGCGGCAGGCACGGAGCCGCCGAGCTCCGTCGCTAGGTCGGCAAGAGC
CGCCCGCTCCGCATCGCTGGCTGAGGAGGTTTCAGCCTGTAAGCGGCGGGCGAGCACGGC
GGCGTCGATCTCGGCGAAGGGGATAAGCTCGAGGAGGAATACAGCCACCATGGTGCGTAC
CGCGTCGAGGCCACCGGGGGCAGCGCCTCCCACGGTGGCGGAGGCCGGGGAGGACCCCGG
AGAGGTCTTGCGGCGGGTGGAGCGGGCCGGGTCGGGGACGGCGCGGCGGTGGTGGGGCTT
CAGGCTGGGGTTCTGGGGGTCACAGGCGTTGGGATTTGGGGTAGGGGTGAAGGGGCGGTC
GTTGAAGGCGGCGATAAGGCGGAGGGAACGGTCGAGGGAGGGGACAAGGTCCGGGACGAG
GTGCTGGAGGGAGCCGACGAGGCCTAGCTGCGCCTCGCGGCGGAAGGAGATGGCCTCCTC
CATGCTCCGGCACTGCTCGCGCATGGTCGCGAGGTCGAGGCCGCCGCCGGCGGCGACGTC
GGCCTTGGTCTCCATTGTTTTGCTTTTGGGGGCGAGAAAGAGGTTCGAGGTTTTGGATCG
AGCTCGCTGTGGGCTGGTCACATGAACGCGAAGCCCAGTACTGTTGGTGGAAAGGGTCAG
TGTACCGGCGCCAGCCAATGACCGGTCACGTCCCGAGCCATTGGATTAGTGGTTTCCTAG
CCGTCAGATCAGGCTCCCACCGGGGTTTTTTTTTCCACTGTTTTGACCCACGTGAGGTAA
AAAAGCACAAAATGAACTCTCTTTGAAAGGATTTCACGATCTAACCCTTTTTAGAAACGC
CACAGCCCGTGGCGTTGCTGCTGCACGTAGAAACGCCAGCTTGATATGACGTTTCTGGTC
CACATTCAAACGCCGGTCTACCCATGCGTTGGCCTTGCTAGACACGTGCAAAACGCCATT
GTCAATGGCGTTTCATCGCTATAGTACTACACATGCATACATGATGCATTCTCAAGGTTG
TGGAGGACGACGACGGCTGGCAGGTTCTGCTAGCTAGCTAATTAAACGTGCTCGAGTGAT
GAACCACGGGGAGAGAAGAGGTGGATGGAAGCAAACCATGAGCAGGCACTATAGCAGCTT
TGTACCAGGTTGAGGGAGGAAGGACAAGTACGTGGTTCTGCCAAGTTCTGCTACATGACC
ATGCATGCGCGCGAAGCAACGACATGGCGGGGCAACGGCATGGATGCGCGCAGAGCACAA
CACGCAGGGATGGGTAAGAAACGTCATGCATAATGGCGTTTGGCCCTTGTGTGGAAACGC
CGGTGAGGGTGACGTTTCTAGGTGATTTATAACGTGAGCTAGAGTGGCGTCGGAATGTGG
ACCAGAAACGTTACGATAGACTGGCGTTTCTATGTACATCAGCAACGCCACGGGTTATGG
CGTTTCTAAAAGGGTTAGATCGTGAAATAGTTTCAGATCGAGTTTATTATGTGCATTATT
TTCGTCTCGTGGGTCAAAACAGTGAAAAAAACCACCGGTGTCGTTGCTTTTGCCCCTCAA
GTCACATCAGCGTGTACTGGAGAGAGCAGTAGTGCAGCATCTCCATCAGCCACCCAACGC
ATCGAGCGTTAAAAAAGTGTTTGCAGCTTGCTAATCGTCTGTTTTTACGCGACGCGGAGC
GCTGGCTCTAACGACTGCTGTAAACTTTAACGCGCGTGAGTAGCTCGAGCAGGCACTGAA
AAATATTGCGTGCACGCTCTCGCACAAACAACATATGCACTTGCAAATATAAAACATATA
CATAGATAAAAAACGGTACATAGATATTTCACAATGCGTACATAATTCATCATAGCATAG
ACAGATAAAAAAACTAGTCCAACACGATAACCTACTTCGAGTCATCATTCTCGTTGGTGT
CGTTCGAGGTATCAAGAAACGCGTCTTCCCAACGAGGATCGTCTGAGTCAAAGAACGACT
CCCAACCTGCGTTGACGAGATCGCACTGCGATATGGCCAGTGCCTTCCACCGACGCATGG
CTGCCTGCTCCGCGCGGCGCCTTGCCGTCCACTCCGCCCAGAAGGCATTCTCGTTGGCGA
CGTCCTGCGGGTAGCGCTGGCGCCACTCCGCCATGGCTCGCTCGTCCGCCTCGGCGATGA
GGAGGCGGCGCTGCTGCCAACAGTGTTCCTCGCGGTCCTGTTCTGTTATAAGATGAGACG
GAGGGGCGACGGCATGCGCCTGCTCGCACGTCGGCCCGGGCATAAAAACCGACAAACCGA
AAACTGAACCGAAACAGGAAACGAAATAACCAAATTTCCGGTTTATTTAGTATGGGCAGG
AAAATTCGGTTAGCTATGCTAAAAACCAAACCTAATTCGGTCGGTTCGGTTTTTAAGTCG
GTTAACCGAAGTAGAAACCGAAACTGGAAATAAACAGCCCATTCCCCGCCCCCGGCTCAT
CGCAGACTCGCAGCCCACCTAGCAAAACCTAACCTCCCAAACCTACCCCGCTACCCGCAC
CCCACTCGGCCACTCCCTCACCCTGCACCCGCAAGCCGCAACGCAGTCCCGCACGCCCGC
ACCCGCAAGCTGCAGCGCAGACCTAGATCGTGGGCTCGGCCAGTCGCTGCCGCCGACCAG
GGCAATCGCCGCCGCCGCCCCGACTACTCAGTCGCCGCCCCTAGTCCCTCAGGCCTCAGC
AAGGAAGAAGAAGAAGCCGCCACCGCCCCTAGTCCCTCAGGCCTCAGC