Contig Data
morexGenes
Links



Map Locations of contig_43204 (5604 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43204

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_59032 2 1668 bp MLOC_59032.2 Available Available LOC_Os02g38200.1, FRAME:-2, EVALUE:6e-91, 13102.m04201 protein dehydrogenase, putative, expressed
MLOC_59031 1 1629 bp MLOC_59031.1 Available Available None





CDS Structure of MLOC_59032






CDS Structure of MLOC_59031






Contig Sequence (5604 bp)

>contig_43204 5604 assembly3_WGSMorex_rbca.fasta
TTTTAGAGGGGGGGGGGGGGGGGGAATCCTTCAGACAACAAAACGAAGAGAGAAAACAAT
TGTAATTGTAAATTTGTTTTAATTCAGAAGCAGAATACAGTGCAAACAGGCAACCTGAAT
CTCTTAACCTCAAGTGTCGCATTCGGTGACGTGCAACTACCAGACAAATATTACTGTTAG
ATCAAAACCCCTAGGGAAAATGGATACCTACCTAAATTATCATTTGTATTAAGAAAAGAC
TAAAGATAAATATATTTTTAACGAATTATTAAATTCATGACTCAAAGCATGGGCACCACA
AGCTGTACATTTGAATGTTTCTGTTGTTGTGTTATGGGGCAATAAGGTACTGCTATTTAT
CCTTGACCAGGGCAGTACATAATCAACCACAAGAATAAATACATAAAATTGATACTTGAG
AAGGCAACATAACCGTAAGTTGTGTAACATGACTGCACCTTTGCTCACATTGTCTATTAA
AAGGCTATGAGCAGCAATGCAGCACCATTGCAAGTTGAACAATAAGCAATTCTAGAATGT
TCAACATTAGCTAGTGCTTTGGTAAATATATGCACATCTAAGGTTAGGCAATTTTGACCA
ACTTAGCTGGGTGTTTGGTTTTAGTCAAACCTTAGGCCAGATTCTTTTTCCAATAATTGG
GTACATGTCATATGCTTACAAAAGTGTGACAAGATTGTAATACCGCGACATATTAGTGGA
TGCCCACATGACCCAAGTAGAGTTGTGTCACTGCGTTAGCTTCACATGGGAGATTTTTAA
TGCAGTTGGATCAACATATATACTGTTCCAAACGTAGCACCTCCAGGTTAACCCTTTTAC
GTGAAGCGATGACTACTTTCTACAAGTGAGCTGGGCATTGAGCAGATTTGGGACAGGACA
GGACAGAGATTCCTCCTATGCTTGCCAACTTGTGTCTTCAATTTTGTTAAACAAATGTTA
CACAAGTTCGATAACAAATGTGCGGTAAATTGTGGCATTGTTAGTTCTAGAACCAGAGAG
GCTCACGATCCATCAGTATGGCGGTCCTATTATACACAGGAGACCTTCTATTTACAAGCA
AATTAGTAATGGATACCATGAACCCTTAAAATAAAGAACCCGCTGTCTCAGTACTAACGA
TCATGACAGGAAAAAATGTTGTCGAAGATTGTAAACGGTTAATGTGCACCCATCCCACCT
ATTGGTGTTTATAGACATGATAAACGTCCTTTTAAACGGATATAAGCATACCTATAAAGT
TACAAATAAGTATCAATGTAATGCATTTTTTCTAGACAGAGAGTTTGCAGGAATCAGAGA
GGAAAATATTTGAGTGAATTCTGCACGCTGCATGCTTCATACTAGGATTTTTGTGTAAAA
GTGTGGCAAGCCAGACTTAGGCAAGTTTTGGCAAAATGTTGAGCCTACGACAGGTAGGCT
GCAAGGCAACTGATCAAACACGTACGACAGATGGCCAAACTTGAATACATATGGGTTGAC
AAAGTGGGGCTGTGAACCAAAAATGCACCAGATGTTCCATGCTACAATTTGCATGAGAAA
TAAAGGTGTCTCGCATACCTTTAAATTCAATTTAAAGAAACAGATAGGCTACCTTAGGAC
TGTTCGGACTCCCTCCGCTCCGCAACTCCACGTCGGAGCGGAGTGGCATCTAGTTATATT
CTGAGGAGCTGCTGAGAGGACGCTCTGTGCGCTCCGCTCCGTGGCGGGCTGCCGAACAGG
GGCTTAAACAGTGGCACAAATGACATAAGCATTTGTGTATCATCCTAACATTGCTACATG
TGATCTCATAAATTAAGTTAATCTCAGAACTAGAAAACATGGCCATGATCCACCAAAATA
TGTACTAAATGCCCCCTGCAGTTCATTCACCGCCAATATCTCAACGACTGGACCTCATGG
TAATCATATTCAGTTGGAACAAACCAATCACAAATGCCTACAGTTTTATTTCACAATATT
ACTACTTCTGCAGTAAAACCCAACAGCAGATGAACTTAGCTATATTGCCCCTTATGCACA
TTTCCACAGCCTCCCAAATGCCAATAGGAAGATTATACAACCTACCTAGTACTCGATAAC
ACGCAGTAAATAAAACAAACTTGTTCTAAGCATATTGACGGAATATTGTTGCTTCAACAA
TACAACGATTGTCCATTAGGGTCCCTTGTCCATCATGTGTTCAGCAAAAGTGTGGGAAAG
CTAAGTACCTCTACTAGCAATCAAACAGTATACTCAATCACATCCACTAACACATTAGCT
AGCATAAACTACATCAGCAAGGTCAATGATTGTCATGTATCGAGCAGTGTGCGGAATTGG
CCATACCTTGAGGCTCTCGACGACGCCAGGCACGACCTCGTGCTCGAGGCCCGAGTACTC
GCCCTCCGTGTTCTCCCTGATGACGGCGATGTCGACGTTCTCGTGCCTGGTGGGCAGCCC
AGGGAGGTTGAAGCAATTGACAAGGGAAGCGTAGAGGTCGAGCTCCTTGCGCAGCTGCAG
GTTGAGGGAGGAGACACCTCCGCCGACGGGCGTAGCGAGACCGCCCTTGAGGCAGACCTT
GTTGCGGCGGATGGACTCGATGACCTCGGTAGGCACCGATGGCATGTCGCCGTGGACCTC
GTACGTCTCGAAGCAGACCGGCGCGTGCATTGCCTCCATCACCTGGCGCACGGCGCCGGT
CACGAGGGGCCCGATGCCGTCGCCCGGGATGAGCGTGACGGTGCGCGGGGCGCCGTCGCC
GGGGCGCGGCATGTAGGTGACGGTACGGCGGGACACGGCGCCAGCGAGGGGGAAGGGAGG
GGCCGGGGATAGGAGGCGCCGGAGGAGAGGGGCGGATCGCCGCGCCATGGTGAGTCCGGC
TAGGGTTTCGGGGTGGATGCGATCGGCGCCGTGTCCAGAAGGATGAGCGGAGGCGGGCTG
GGATGGGGAAGGAGAAGGAAAGGGGTGGGATAGTTCTTTACCCTTTCTCGTTCCATTTTT
TTCTCCTTATTCATCATATTTATAATATAATAAGATGATTACTCCCTCCATTCCTAACTA
CTCCCTCCGTTCCTAAATAGTTCGTATGTAGTTTAATAGAGAACTACATACAGAGTAAAA
TAAGTGAATCTATATTGTAAAATGTCTATATACATCCGTATGTAGTTCAATAATAGAATC
TGTTAAAAGACTTATATTTAAAAACGGAGGGAGTATACGTCTGTTTCACTAATAAACTAC
ATACGGATGTATNNNGACATACTTTAGAGTGTAGATTCATACATTTTGCTCCGTATGTAG
ACCACTAATGAAATCTCTTAAAAGACTTATATTTAGAAACGAAGGGAGTGCATAACAACA
ACTTTAACCGCAATCAAACGGACGCGCGTTTTGTTCCTCTTTTGTTCGTTTGGGTCGGTA
TATGTGTTCTCTTTTGTAAACGCAGGTGCTACGAATCAGTCGAATGATTTTATTTTTTCC
GTGTGCAGTCGTCACATGAGCGTTGTGGGGCTGTTCGATGCAGCAACCCCACGGCAGCAA
CCCAGCTTCAATGCAATGGGTTGCCGCTCCACTGTAGCTCGGCACGACACGACCATAGCT
CCAACACAACATCGACGACATCCCGTGAAGCTTCATTGCAGCCCCGGTGTAGCTCCATTG
CAACACCGGCGAAGCTCCATTGCAACCCCGACTATGCTTCCAGCGGCCCAGCGCTGCTTC
ATTGCAACACCGACGGCACTCCCAACAACTTCAACGCAACATCACCTCAGCGCCTCTGTC
GGCCACTCGTCGCGGTCACCGTCGGAGCATCGACGACTCTCCATTGCAACTCGGCGGTGC
TCCTAACACCTTGAGGGAGAATCCCTTTGGAGCGGACCTCTCCGCAACCCGAGGCGCTCC
CATAATGTCGATGACGCTTCATACGTATGCTCTATGACACAAGGCACTCACCAGCAGCAC
TGTCGCACTTCTCAACACCGACAGCAGCACGACCACGCCGAAAATTGCAGGTCAACGTGG
GTGCTGCATCCTGCAAGTTGCAGTCGGGTGCTGTAGGCATCTTGCTCCGACGAGGGCTGG
TGGTGGAGATGTGGGACGGCTTGCTCCGATGAGGGTAATGGAGAAGTGGTGGACGGGTTG
TGCGTCGAGATGGAGGTAGGAGAGGACAAATAGAAAGGAGGTCTCGCTCTATCACTGATA
AGGAAGAAAAGGATTGAGCCACTCGTGTTCATGCTGGAGATAAGAGACTACACATTGTGG
TCCACGAGGACGCATGGATCCCAGGCGACAAGGCTGATTTATGAAGAAATTAGTCTGATC
GTTTTCCTTTTGCAAATGGGTCAACTGTACGCCCAATGCGCCGATCCAAATCTTGTCCTT
GCGGTCGGTCGTTATTCATTTTTGATCACACATTGTTTTTTGGGAACTTGCACATTATAT
TTATTTCATCAAATGCATTCCAATGCATTTTTTTACCAATTCTTCTTGGCTACGAGTATA
AAACCAAAGAAAATAAGAACCATAGTTAGACATTCTAAAAGATGTCTGACTTCCATAACC
GGTCCTACTAGTTGGACTAAGATCTTTTCTATATCTTCGTTGTTGATCTGCGGAAGCTTA
ACAACGTCTTTCATTTGTTCTAAAAAATTAGACGTTGATTCCCCTTTGGTCTCTTATTTA
CTCTTATCTACACCTTTATTTCTGGCTAGAAGTGCAGGGACATCTAGCTAAAATAGTATT
GAGTCTAATAGCAAAAGGCTACACTAAAATCACACCTCGTTATTTATGCACTTGGCGAAC
ACCCAACCGGGATGTTCCAGCATCCAAGAAACGCGTCGGACGACCTACAGGCAGTCATCG
CACTTTGTGAACGACAATGGTGAGCGGGCAAGCCTCTGGGCGAGCACCGAGCCACGGCGA
TAGTCGGGCATGGCTTTGCCAGCGGACCGATGACGGTACATATCTGGATGGCTAGAGGCG
GATTGAGTGCGTGCATGCTGCATCGAGCCATTGCATAGACTGGGTGGACCAGTACCGAGC
CAATCCATGACAACCAAAGTCCGTCGGTGGCCGGATTCGCCAAATCCCGCCGACAGAATG
CGCTAAATCTCGACGTTGTCATCGCAGATTCACCATTCGGCCCTCCGTATCAGCATGAAG
GAGGCACCCCCATGCCGCCGGCGGATCTGATGTTGGTGGAGGGGGCGCTGGAATATGAAT
GTCGGCCTAAGGTTTGTGCACTTGTCGACGAAGGGTGGGGAAGGGGATAAAAAAAGAGGA
TGTGTCATCGACGGGCGCGCCCGGGGAAGGAGCACGCGAACAAGACGCGTGTCCACACCG
ACGCAAATACGACCTAAATATAGGTCTGGAATGGATCACGAACGGCCAACAATACCGTAC
GTGTGCCCGTTTGGATCGGTGCGTTGAACTGTATTTTCTGTCCGCGATGACCCAAACGAA
CCCACGCACATGAAATGGATCGTTCGGTTGAAATTGATATAATCCCCAATCCGGCTCATA
CATATTCTGCCCGATTGATCAATCCTCTGTTTTTTCGTCTCAACAACTACCATTGTTGCG
ACTAGCACAAATGCCCGTGCGTTG