morexGenes - Barley RNA-seq Database

Contig contig_43152
Source Contig contig_43152
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_43152 (7955 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_43152

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_58958	2	1663 bp	MLOC_58958.2	Available	Available	LOC_Os11g07020.1, FRAME:-1, EVALUE:0.0, 13111.m00718 protein fructose-bisphospate aldolase isozyme, putative, expressed
CDS Structure of MLOC_58958

Contig Sequence (7955 bp)

>contig_43152 7955 assembly3_WGSMorex_rbca.fasta
TCGTGGGCGGCATTGCGATTTGGGGCGACGTGGCCGGGCCTTTAGTCCTGGCTCAGAGGG
AGGCCGGGACTAAAGGGTNNNNNNNNNAGGCCCGTTTTCCACTAGTGTTATATCCTCATA
ATGTTTCTTAAAGCTCGTGCTACAGCCGACTGTTAATCTGTAGCCCGCTTCTCTTCTCTC
TTTTCTTCCCTTTCATCCAACTTAATAAAAACATAATACTTTAATCTTTATAGTATGCTA
ACTATATCTTATTATATTTGTCTTTAGGGACAAGTACCAAAATTTTGCAGTAACCATGCA
AATCCATGGATCACACACGTAAAAGTAGCTTTAGAATAATCTACTGGAGCAGTAAAGTGC
ATATCGAGAGGCAAATTAACGTGTAAAAAAGGATCTAGAAAATACAGTAATCATCATCTC
AGGTTCAGGCTCCCAGCTCGATCGATATATCATGCATCTTTCTGCTTGGTAACGAACGTA
CGTAGTAGTGTTGATTGGAATGGTTCGATTAATAGCTGTAGTTTTTGACGAACATGCCCT
CTTTGGCCTCGGCAGCCTCGCCGTCGCTGGTGTACTTTCCGAGCTGCGCGAGCGAGTTGG
CCTTGGCACGCAGCAACAGCGCCTCCTGCGCCGCCTTGACGTTCTCCGGCCGGCCACCCC
ACGTCTTGAGGCACGTGTTCTGCAGCGCCCTGGCGTAGGAGAAGGAGACGTGCCACGGGT
TGGGCCCCTGGTTCATGGCGTTGAGGTTGAGCGTGGCCTCCACCTCGGACTGCCCTCCCG
ACAGGAACATGATGCCCGGGACGGCGGGCGGCACGCGGCGGCTGAGGAGCTTGAGGGTGT
AGTCGGCCACCTGCTCCGGCGTGGCCCTGTCCTTGCACTCAGCGCCAGGGGTGACCATGC
TGGGTTTGAGCAGGATGCCCTCGAACATGACGTTGTTCTGGGACATCTGGTAGAATGTCT
CGGCCCACACCTTCTGCGCCACCTCGAAGGTGCGCCCGATGCCGTGCTCCCCGTCCAGCA
GGATCTCCGGCTCCACTATGGGCACCAGGCCGTTGTCCTGCGAGATGGCGGCGTAGCGGG
CGAGGCCCCAGGCGGCCTCCTTGACGGCGAGCTCGGAGGGGCCGTTGGGGATGCTGACCA
CGGTGCGCCACTTGGCGAAGCGGGCGCCCTGCTGGTAGTAGGCGGCCTCCCGGGAGGCGA
GGCCGTCGAGGCCCTGACACCAAGACTCGTCGTTGGAGCCGGTGAGCGGCACGAGGCCCT
TGTCCACCTTGATCCCGGGCACGATGCCCTGCTCTGCCAGGATGTCGACAATCTTCTTGC
CGTCGACGGTGGACTGGTAGAGCGTCTCCTCGAAGAGGATGGCGCCGGAAATGTGGTTGC
CGAGGCCAGGTACGGAGACCAGCAGCGTGCGGAACGCCTGCCGGTTGGCCTCCGTGTTCT
CCAGGCCGATCGAGTCGAGGCGCTTCCCGCAGGTGGCGTTGGACTCGTCCATGGCCAGGA
TGCCGCGCCCCGGCGACGCGATGGTTTTCTGCATGTGCGTGCAAACCAACAGCATGTCAG
CCCAGTCCATGAGTCAATTATAATTCGGACGGCGAGAAGCTGCAGCGTACGTACCGCTGT
CTTGACGAGCTCATCGTCGTAGGCGCCGGCGCGAACGACCATGGACACCCTGGGGGCGGC
GACCTGACGCGCGACGCCCCATTCGGCCTTCTTGGGGAGGAAGGAGGACTTGAGGAGAGT
AGCAGATGCCATGTCCTTTCTTCTTCTTGTTGTTCTTCCTTCGTTCCTTGCTTGCCACTG
ACCTCAAGCTCAAGATGCTAGCTATCCTCTCTGCTTCGTTGAGACCACTGGACTCATATT
TGAATGGGTGGCACAAGGAGATATGAGGTGTGGGGTGGAGGTTTGGATGGCTCAATGGCT
GGCTGTCCGTCCATCGCGCCAGTCGTCACCCCCTTTTTAATGCACAATTGCAATTCCCCA
TGTTTATGTGCACCGTGTAAAACAAAAGACGAGAAAATTCCTGCACCTGATCCATCCGTG
GGAACGTTGCTGGCCTCATGATGGCTGACATCATAACTTGCGGCCGCGTTTCACCGAGAG
CCAATGGCACAGATTTCTCCCGATAGGGCGTCCATGAAATGATGACGAAGCCTCCAGTCC
AACCAAGGTGACAGAGCAGGTCCACGTTGTGGTCGTCACCTCGATGAAGTAATATTGTCA
GTAGTAAAAATCAGGGCTTTGGTTCTCGTCAAACAAGGGCAATAGCCCCCGTCGTGCTAT
CAATAGAGATTAATGAAAGTATTAGTCACGGTTCGAGCGGCCTGGACGCCGGCCGGGCCT
CGGCAGACATCAGTCTCGGTTCGGCTAGGACCTTTAGTCCCGGTTCCGGACACCAACCCG
GACTAAAGCTCCTCGCTCCTCACGTAGCCCCTTTTGTCCCGGTTGGTGTTAGTAACCAGG
ACTAAATGTCATTCTTCAGTCTCGGTTCTAAACACCAACCAAGACTAAAAAGATTCCTAT
ATATACGCCCAGCCCGCGTGGCCTCCTCTGATTTTTTGTTGTAGGTGGTGGGAGGTGTAT
GTTGTATTCTGTTCTCACTTTCTATGCATATTAGGTGTTCGATGAAATGCCGGGGCACAC
TTAGTAAGCTTTCTCTTCTGTTCTTCCTCCAAGCTTGACCTCCAAACTCCATTTTTCCAA
GATTTGTCTAGGTTTGTCGGTGCACCAACTATTCAAGTGTTCTAAAAAGGTTAGCAACTT
CATTCTTTCATCTTCCACTGCTAGTTTAGCTCATTTCAAATGCTCTAGAGAGATATATGT
TCTATGTTAGTTTCAATGTATGTTTTAATTAAATGATCTAGAGCGATGTATGTTGTTCTA
TGATAACTATGTATGAACTTTATGTATTTAGTTTTGTAGTAATAACATTTGATGACTACT
GTTGTTTGGTTTTAATGTGATGATGAACTTGTATTAATTTGATCATTTCTCTATTCATGA
TGTTCTGTAAGGGTTTTTGATATACTTAATTATATAATACACGTAGATGAATCGGCAATG
GATGTACGGTGACCGACGCACTTCCGAGTACATTACGGGCCTGCATAATTTTATCGATGT
GGGTGCGGCAAACAATCAGAATGGTTTTATGTATTGTCCATGTATTGTCTGTGGGAATAT
GTGGGATTAATCTTCCTCGAAAACGATACACTTCCACCTGCTTAAGTTCGGTTTCATGCC
CCACTAAAGTTGTTAACAAGCACGTAGAAATAGGAGTTATGATGGAAGACAATGAAGAAG
AAGAGGAAGATGACAACTATCATATGTCCTCTGAATATAGTGATACTGCAACGGGGGAAG
CNNAAGATCAAGAGGCACCAGATGTGCGTGCTGATGGTGATCTTCGTCGGGTCATTGTTG
ATGCACAGAGAGAATGCGAAATTGAAAGGGAAAAGTGGAAGTTCAACCGCATGTTAAAGG
ATCACAAAAAGGGCTGTGTCCAAATTGCGAAGATGGCAACACAAAGATTAGTACCACACT
GGAATTGCTGCAATGGAAGGCGGAGAATGGTTTATCTGACAAGGGATTTGAAAATCTACT
GAAAATAATGAAGAAGAAGCTTTCAAAGGATAAAAAATTGCCTGACACTACGTACGACGC
AAAGAAGGTTATCTACCCTCTAGGATTAGTGGTGACGAACATACATGCATGCCCTAATGA
CTGCATCCTCTATCGCGGTGAGGAGTACGAGAATTTGAACGCATGGCCGGTATGCGGTGC
ATTGTGGTATAAGATCACACGAGATGACCTTGGTGATGTTGAGGACGAGCACCTCAGTAA
GATGGTCCTCGCCATGGTGATGTGATATGCTCCTATGATACCATGGTTTAAATGTTTGTT
CAGAAAAAAAGAGCATGCCAAGTTGTTGCAATGGCACAAAGAAGACCGTAAGAAATATAG
GATGTTGAGAGTACCCGCTGATGGGACGGAGTGGAGAAAAATCGAGAGAAAGTGGCTAGA
GTTTGTAGATGGCGCGAGGAACTTATGGTTTGGTTTAAGTGCAGATGGAATTAATCCTTT
CGTGGAGCAGAGTAGCAATCATAGCACGTGGCCTCTGACTCCATGTATCTATAACCTTCC
TCCTTTGTTGTGCATGAAGAGAAAGGTCATTATGATGTCAGTGCTCATCCAAGACTCTAA
GAAACCCGACAACGAGATTGATGTGTACCTAAGACCATTAGCTGAAGAACTTTTACAGTT
GTGGAATATCAAAGGTGTACGTGTGTGGGATGAGCACAAATAGGAGGAATTTGACCTACA
AGCGTTGCTGTTTGTAACCATCAATGATTGTCCTGCTCTTAGTAATCTTTCAGGACAGAC
AAACAAGCGTTGTATGCACGCACTGTTTAGATGAGACTGAAAGTATATATTTGGACATAT
GTAAGAAAAATGTGTACATGGGACATCGTCGATTTCTTGAGAGTAGGCATCCCTTAAGAA
AGAAAGGCAAGCATTTCAAAGGTGAGGCGGATCACCAGGAAGAAGCATGTCCTCCGTACA
GGTGATGCTAAATTTGATATGACCAAGGATTTAAAAGCAATCTTTGGAAAGGGTCCTGAC
AGACAGTCTGTTCCGAATGACACTCACGGACACACACACATGTGGAAGAGAAATCTATAT
TCTGGACCTACCTTATTGGACAAACCTAGAGGTCCGCTGTGCAATCGATGTGATGCACGT
GACGAAGAATCTTTGCATGANNNNNCTAGGCTTCTTGGGCATGTATGGGATGACAAAAGA
TACACCAGAGGCACAAGAGGACCATAAATGTATGAACGAAAAAGATGGCATGCATCCAAA
GCAGTATCAAGGTCCTGCTAGCTACGCTCTTACTAGAGAAGAGAAGGTAACCTTTTGTGA
ATGTCTGCTTAGTATCAAGGTCCCCCTTGCTTCTTGTCGAATATAAAGGGAATATTAAAT
GGGACATTTCCATTTTTCCCCTAACTTGAACCACCACCTGGCATATGCCCCTAATTTTCG
GGTATGCTCAAAAATACCCCTCTCTCGTGTGTTTCCCTTATAGAAATCCCCCTCCGTGCC
GGTTTCGTCTAGTCAAGGGTGTTTGACCGGTAACTGGGCGTCACTTGGACATATTAGCCC
CTACTTCTTACATGTGGGCCCGTCTCAAACGCTATCCACCCTCTCACTCTATTTCTTCTA
CCTCGCGACAGTTACCGGCCTGTAGCTTGATGATTCACCGGCGGCACACGAACTACAACC
TTTTGGAGCTCACGGAGTGAGGCCGCGGTGATGTGCACCTCAGGCATGTCATACGTGAGC
TCGTCTGTTGTCGTGGAGGCTAGTTTTTCTTCTTTGATTTTTGGATTTCTCATTAGGGTT
TGATCTCAAATTAGGGATTTGCTCGCTCATAGGTCGATGGGGCTGGCATAGTGCAGTTCT
CGTCCGAGATCTACATGCCGGATCCGAGCTATTGCGGCCTTGAGAAGCTTTCCAAGCACC
GATGCCCGGGGCACGGGCTCGTTCCCGCTCGCCGTGTCTCCTTGGGAGGAGCAAGAACGG
CGACAATTTCTTGGATGCCCACTTGATGTAATTTGGTTTGTTTGTTTTGCTTTGCGAAGA
TTGCATTTTGATGATTTTTTGGATGTTGCAACTTCCTCATGAATGTGAATGGGCTATTTG
GGTCGACCCTCCTCCTCCAGATCTTGTTGGGCGTGCTTTTGAGACACTTTATGATGGGCT
CGTAGCAAGTTGGCTCAAAGCTGACCATTTAGAGAGGAGGGTGACACATCTTAGAGAGAA
AAAGAATAATATGAAGCTAGAGATGAAGAAGATGCATGAACAAATGAAAAAAGAGGCATT
TCTGATGATAATTGTTAGCAATGCATTATGTCCTACTTGTTTGGTTCAAAGAATGCATAA
TTTTCAGTGGGACTGTAATGAATTAGCTTATTTGGCACTGAGTTGAAGTTAGATTGATGT
TGTAAACTTTGAAATGATGTGAATTGTTCCTGGATGTGTTACTTTGATGTTGTTCATCTT
TTGGCAGAGACAAAGTAATTGAGAAACATTACTTAGATCTTGTGATCTCTATGTCTCATT
GTTTTTGTTTGTGATCTTGTGATCTGGTGGACCAAGAAAATGGCAGGATCAACAACAAGG
CTTGACCAACAACAACATCACATACATAGTTCAAACAGTTGTACACAGGTTCAATAGTTG
CATCACACAACAACATCAACTAAATAGTTCAAACAAAGGGACACATGGTCCAATGCTTCT
GGTATATACTTAGAGTGCCCGACACTTCATCACACAGTCTGGACGTGCTCACAGAGTGTT
CACAACAGGTTTCCGTTCTAGCTCCTAGTGTTGCATGTAGGATTAGTAAAGAGCCTGGAC
TTGCTCCTAGTGCTCCTAGCAACGGCTGTCACCTTCTTAGGAGAGGAAGACATGCCTAGC
TGGCTGCTTCCATTAACAGAACCATCACCAGTCGAGAGCGTATCACCTTTCGCCATCTTC
TTTGGTGAAAGAGGGTTGTCACCTCTCTCTACTTGTCTTTTGTAGTTTTTCCTTGGGTTG
AAAAGTAACAACACAAGATTTATTAGTTAGTAATTAAATAATTAGACAGATAAATCAATT
AGTTGTAGTTAAAATAGCAAGTTACCTCACAACACCCGTTGTAGCACTTGCTACAGTTGG
TGCATCACTTACACGAGCTATATCATCTGTTTGTGGTGCAAGATCTGCACTTGCTGCTTC
TGTCTCAGCTGCTCTAGGTGCATCTGTCTGTGCTGCTGTAGGTTCTTTTGTGTCTGCTGC
TGTAGGTTCTCGTGTGTTAGTTTCTGTAGGTTCAATTGTCTTAGGTTTTGTAGGTTCATT
TGACTCAGATGCTTTAGGTGCATTGTCAGCACCCCAATGCTCATCCTCTTCTCCAAATGC
TGGGTCAATTGACTCTTTGCAATGTGTGCCATGGTGACCAAGTCTGCCACACCTAGAACA
CTTCTTTCTCCTGGCCCCAAGTCCTTTTCCTTCTAACTTTGCCCTAATCCTGGTCTTTCT
ATGTCTACTAGGGGGGCTGTTTTGAACTGGAGCACACAACTTGAACCCAGGGTGAACTAC
ATCGCACTGTTGCTTCCCCTCCATTGCAGGCAAGTTGCCAACATATGTTGCATTGAACAT
TTGCACTGAGTAATATGGGTGCACATACTGGTCAATCTCATAGGCTGGGCCTCTCATTGA
TGTTATGAAATACAATGCATGTATGCAAGGTTGGCTTGTAATTTGCCACTTTCTACAGGT
GCAAGTCCTAGCTTTTAAGTCCACATGATATCTCCACTCCCTGTTTTCTTTGACAACTGG
AGTGACCTCAGCCTCATGTGTTCTTCTTTTCACTACAGTCATGTCGAACCCCTTTGATTT
TGCCAGCAACACTTTCATAACTTTTGGATGCCCAACATATGTTGCTGCTGCAATGCTCTG
CCTAATGTCAAATTTCTCCATTATGTATTGTCTTATTGTGTCAAGTAGATCAAAAATGTG
TAGTCCTTTCCACTTTATAATCTCGGAATTAAAAGACTCCGCAAGATTATTGTTAACATA
ATCCAACTTGCATATTTCATTAAAAAGAGCCCTTGCCCATAACTTAGTGTGGTGCTCCTC
AATATACTCTTGCACACCTGGCTTGCTGTACAACTGAGTGAGATGGTACTTGTGCTTTTT
CAAACTATATGTCAAAGAACAGGGCCACAAGTTCTCATCAAAGAATTTTCCTCTATTTTT
TTACTGAAATTAGCTGCAAGTTTCCTCATGCATTCCCTGTGCTCTACACCTGGGAACGCA
ACTGTCACATCCCTGACACCTTANNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGCATTG
CATCTAAGAAATCTTCAACAAGAACAAAGAAAGAG