Contig Data
morexGenes
Links



Map Locations of contig_43095 (5692 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_43095

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58901 2 2554 bp MLOC_58901.1 Available Available LOC_Os06g36050.1, FRAME:+2, EVALUE:3e-120, 13106.m03723 protein expressed protein
MLOC_58900 1 1582 bp MLOC_58900.1 Available Available None





CDS Structure of MLOC_58901






CDS Structure of MLOC_58900






Contig Sequence (5692 bp)

>contig_43095 5692 assembly3_WGSMorex_rbca.fasta
CACCCCTCCTCCTCCTCCCGCTCCCCTCTACCCTCCAATGCCGCGCCGCCGGCGACGAGG
ACGGCCCGTACGGCATCTCTCGTCCGGGCGCGCGGCCTCGATGCGTCGTGCTCTGTTTCC
TAGTAGCAGAAGTGCGGTGCGAGCGGTTCGATCTCGTCGCTTTCCGCTTCGGCTCGTAGC
TTCGAGGGTAGTAGCGCCCCGCTCAGCCTGCGTGCATTTCCGAAGAGTAGGGAGCGAGCG
AGCGAGTGAGTTAACGACGCGTAGCGTGGTGCCGTGTGTTCGTGGGCCGTACGGCGGATT
TGGTTCCATGGGAATGCATCCGAGACTTGCCGCTTTGAGGGTTTCATGTAACGCAGGGAC
CAAACTGCGATGGATGGATGGATGGATCATGGATGGGTGCTCGTGCGCGGTTGCGCTTGG
GTGCTCCTGCGCGGTTGCGCTTTGTAGCCGTAGCGAATCCAGCCTCAAAGGGAAAACAAA
GTGAAAAGTAACATGGACGTTCCTGTCGAAACTGATGCGTCAAACTAGTAGTAGGAGTAC
TACGTAGGTTCCTGTTTGGGGCTACTGTATTTTCCGGTGACTGCTTTCCGCCTTCGAATT
TCCTTTTTTCGAGAACAATGCACCTTTGGATCTGTGCTTATTGTCATTTGTACTACTTCT
GGTGTGCACCGACGACCGAGTGGCATAGTTTTGAATAGCTCGCTATATAGCGTTTGAGGA
ACATCACGCTAAGCCGTTTAGCGCCATTTAGTGTGCTAACGCTTTTGCCGCATTTGACAT
AGCCCGTTATTTAAAACTTTGCCTAGTGAACTAGTGAAGCAGTACTAATGCTGGTTTGAA
CGGGAGGTCAGTTAAAGGTTTTTCTGTCCTAGCCTGCTGAGCTTACATGCTGTAGCTTGA
TACTTTCTGGTATGAAGTATCACACTACTAGGAACTATCTGCGGGATAGAAGGGTTTTAG
GGAAATTAGGAAGGAAAATGGTGAACTGGGACTGAGAAGCTGAGAGAGAAGAAAGCACAT
TTGATCAATTTTGTTTGTTCGCATCCAGACCACGGTTGCATGTACAAAATTCTACACTGT
TGTGTCTTCCTGAGCTCCATTCACTTACACCATTCATGTACCCATATGCTTGGGGAGTAT
ATGAGGCACTAGCAACTTACCAATTGCATTATGTGTTCATTGGGGAGTTCCCTTCCATTT
CAGACTCCTGATTAGCATATTTTAGACTTTTAGTAGTACTACTGGTTCAGAACTTATGCC
CTGGAATTTCCCTTTATTATGTCCCTGAGTAGCTATTATATGCCCCTTTACTTTGTCGAT
GGTTGTTGCTTGAAGAAATGGGGAAGAGGAACTGCATTTAATTTTTGGGCCTGCTTACAC
CATACTAGTTACTTATATTGCTGCTTTGGACCACAAATTTGACCTTAGGGGACCAATTGT
GTTATGGGCTTCATGGCGTTGCCTTCCATGCCTTTTAGATTTTTGTCCGTTGTTCCATGC
ATAATAACTGTGCTGCAGTCTTTTATCTTTCTGTTATGAGGTTGTCTAATGGGTGAACAT
TTCTAGATCCAAATGTGGTGAATCGTGAACATACCTAACTATACATTTCTGCTAAGTTTT
CAGCCCCTTGGCCAATTAGGCCTTGTACAATGCAAGGTGCTTAGGAAGAGGTGCTTAGAG
AAATAAACCAGATTTTTTTAAGAACCGGTGCTTATCTGTAGACCGTTACTAGGACCAAAC
ATGTCCTTCCTTCTAAGACACCCACCTTTCCAACTTTGTTGTCTGAAGTTATAACTGTAA
ATTGCAAGAAACGACAAACCAATCTCTGATATTTAATAATTTTATTCTGTCTTATTTCAT
GTATGTTTTTTGTTTCGTTGGAAGCACTTCAAACATGTGCCATGGATGCATGCATCTCAC
TGTTAGTGTAGGAGATATGATGAGCCACTTGTCAGTTGCAAAATTTCACGGTGGTCTAGT
GATTTATATTTTTAGATTGATGGCTGGTGATTTATATCTGTCATGGATCAAATTAAGGTC
TCTTAGCTTTTTCAGTGGTTGGCAGATGGGCAATGCTTGTATGAAGAAGATGCACATAGT
TTCTACTATATCTGTATCACAGTTGCAACTTGCATGTTCTTTCAGTTATACGGAATGGTT
TATAGAATGTGAGTGTGGTTTCAACAAGCATGTCCAATGTGATAATTTTGCATCAGTACA
TACTTTCCGCAAAAGCTGCATTAATTATTGTGTACCACTCCAGAAGTGGAGCATGTGTCT
GGCAGGTGTTATACTACTTTTGAGCGACTATACTTAATGCTGGATACTGTATGTGTTTAT
TGTCGAATTTTATTTTCATCATCCAGATATATCAAACCCAGTAACTTGTTGCCTGACATT
TATTTTTTGTTTATCCCTTTCAGCAGTTGTAAACATGCTTCATCATTCAAACAGCCGCCA
GCAGAGGAACAGAGGATCAAAAATCAAAACGTTACTCAAGGTCACCTTACTCTTAGGTGT
GGCTGTTTGGCTTGTGTATCAGGTGAAGCATTCTTATGATAAGAAAAATGAGTACTACAA
TGCTACTGAGGACCAGCTTTCCCATGATGATAGAAGCATGTTCCAGGGCAGGAAAGAAAG
GCTAGGTACTTATGCTGATGGTAATGTGGAAAAGGCGACAGAGAGGACCGATGTAACAGG
CAAACAAGAGGAAGAGAATAGTGGAGAAAGTGTCTTTGACAAAGACAATACTGACTCCCA
TGACGATGGTTCGGGAAGCACAGAGAGGTCAGAGGCTGAAGAAGGGCAAGCCGGCCGCAC
AGATGATAATGCTGAAGCACATCTTAATGAAACATCTGAATCCAACTCATCTGATGCTGA
GACTAAAACTGATGTCCATTCAACTGGAGATGATGTACCCCATGAAGAAGAGGCACAAAG
TGATGGATCCGCTAATGCAGGTCAGATCAATGCAAGCAGCAATGGTTCAGATGGAGAGCA
ATCTGAGAAAAAAGGGACAGTGGAGTCTCAAGCTGACTCCGAGTCCCTTTCTGAAGACAC
CAAGGCTGGAACAGGCGACGAGCATTCCGCTGAGACTCTTCCAGATGAAACAGGCAACAT
ACCAGCGGTTCATAATGAAAATCCTCAAGGCGATGCAGCTTCCAGTACATCTGATGCTTA
TGGGCATAGCAACAGTGAGCCTGTTCATATAGAGATTGGATCTGAACATGAAGGAGCAAT
AACATCATCTGTGACTACATCTGGTGATGCTGAGAAGGGTAATTCTGTGGAGACTAATCC
ATCTGAAAGCATCTTAGTAGAAGAAAAGGCTGGCGGTGATGGCGAGAAGGGCTCAGAAAC
GAGTACAGCTAATGTGGCGTCAGATGCCCAAGAAGCAAACACTGAGGAAGGCAATGCTGC
AACAGAAGTTCGCGCTGACCAGGCTGCAAATACGCAGACAGAGAACTCCGAAGGCGCCTC
TGCTGCTGCTGAAGGAGCAAATGGTTCTCTAGAAGAGACGAAGGCTGTGGAGAACCAGAT
TGATGGAGCCACAAAAGGGTCAAGCAATGGTGATCAGGACAATATCAAGATTGAAACCAA
CACATCTACCAGTGACGAGCACAATGAACGTCAGAGCGTCGATGTCAGTGCTGGGTCGAG
TGGCTCAAATGACAGTGGCCCTGAACAAACTGGAAAAGCTGAAACCCAGTGATAGCACCA
AACGCATACGGACATTGTTCAGCATACGCGATTGTTCATGGACACGAAGAGGAGCTACTG
CACATAGAAAGATTGTTTGTTTGTTCAGATTGAGGTTACATCCTTCAGTTGATGTTGTTG
ATGCACAACTGTGTCAATTGTGCAGACTATGTGATCCATGCACTACAAGACTATTTGCAC
GGCAGTGTTTTTCTTGCCAAGTTACCTCAAGAATGTGACTTTGGCTGCCAGGTTTCAAAT
CACTGCGAAGTAATCTGTTCATGCCTCCTATACCACGCTGGCGACCTCTGTTCTTAATGT
AACTGTAAGCTGGAGAACAACAACAGTCAACTGCTTGCCTGCTTCTTGGTTACAGCTACT
ATGTTTGGTGTTGTTTTCTCCCTAGTCCCTAGCCTTTTGGTGCTCCTTTCTACACTTGTT
TGACTTGCAGAAAAAGTATGGTATATGTTGTGCGATTGCATCTTTGTCAGCAGAATCAGG
ATGCGTTTTTTTTTTACCAGTGTCTCTACTGTCTTAGATTCATTGTTCCTTGGTTGTTTG
CGAAATCTGGTTGCTTGACCATTTGTTGCCAAACGTTTAACTAGCAACTCTTTGCTCCTG
TCGTTTTAACCTGACGCAGGGGCAAAACTGGTTAACTGGTTTGCATACACAGGGGTCGGG
GGCTCGGAGCTTAGGACAACTCCAAAGGCGGCCAAATGCCCTCCCATACTTATCCGTGCA
TATATTCGAACGTGTCCATGGACAAAACGTGTCCGTGGACAACACCTGATTGTACATCGT
TGGAGGAGTTTTGTCCATGAACAACACCTGATTGCCCATCGTTGGAGGGATACTCAATGG
TGTCCCCTTATTTTCTTTCTTGTCGTATTTTCTTTAGAGCAACTCGAACCGGCCGATTCA
AACGGACGGTGATTTTATCCGTTTTTTATCCATTTGGGTCGTTCGTCGGCTCTGTGTCCG
TCCGGTTTATGATTTGAATCGGCAGCGCGTCCAACGCGTGGTCGGCTAGCCGTCGGTTTT
TAACAAATACAAACTTTTTGCATATTTTTTAAAAACAAATGAAATAGCATAGTTTCACAA
CCGAAAATAAAATATAGCAAAGTTTTACAGCCATGTCAAAGAAAGAGTGTCAGATCTAGA
GATCTTGAGAGACCAGGGCCTCAAATATGACAGTGCAAGCCTTGACATGGCTCTTGTACT
AGCCTTGCCAAGCAGAAGGGTAGTTTTTCCACTCCCAGTGCATGCAGTCTATGCTGCCAA
ACATCCTTTGAAAGCCCCGGCTAGCATTGGTCGCCAACAAGCGGGTTGTATCTGCAGCAG
TCGGCTCTCTCAAGTACTCAGGGCCAAATACCGCAACCACAGCCTTGCAGAATCTGTACA
ACGACTGTAGGCACGTAGATTCACTCATATGGACGTACTCATCGATAAGATTACCGGGTA
CTCTGTAAGCAAGCATCCGGATAGCTGGAGTGCATTTCTGATAAGATGAGAAGCCAATCT
TTCCAATGCCATCCTCTTTGCACTCGAAGTAGTCATCGTATCCGACCACCCCCTCCCAAA
TCTGGTTAAAAACATGCCTAGCCATATGGAAACGAGGTCGGAATTTCTGATGTTTGAACA
ACGAATTGCTTGTGTCAAAGTAGTCCTTCCATAGAAGGAAATGGCCGCTCTCTCGGTTGC
GATTCAACGCTGGAACATGCCCCGGAACAACGGCTGCTGCCTATTAAGGTGATCATGGAC
CAACATGGCAAGCAGAATCTCCTCGTCGTCGGATGAGGAATCGTCGGAGTCGCACAGACC
ATTATGGAAAAAGAACTCCCCGGTGCAGTCCATTTGTACCTTGAGGCAAACTATCGAACA
ACTTGCGGGCGTGGACGACGAAGCTGACCGGCGATGGCGGATTGGGGGCGGGGAAGCTGC
GGTGTCTCGGCGGGGTCGGGACGGGGTGGTGCGTGACCGGCGCGGGTGTGAG