Contig Data
morexGenes
Links



Map Locations of contig_43093 (4082 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_43093

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58899 1 923 bp MLOC_58899.1 Available Available LOC_Os08g08990.1, FRAME:+1, EVALUE:2e-132, 13108.m00942 protein Cupin domain containing protein, expressed





CDS Structure of MLOC_58899






Contig Sequence (4082 bp)

>contig_43093 4082 assembly3_WGSMorex_rbca.fasta
CCTCTAGGGCATATTTCCAAGATAGATATGACTACCAAGACATCACTGACACCAACATCG
TGGCGCCAAGTTTTCAGTTCGACCATCCCGCACATCTAGACAAGAGGAATCGGGCCACCA
GATCCACCATGATTTGTCAAGGACTCTAGATCAGGATCAAGGCTTGGCCACCACCGCTGA
CGGCAACTTCGCCATGTGCACCTTCCACGACACACCTCGAAACCCCCATGGACAAGGGAC
AATGACAACAACACTTCTATGCTACTAGCAGGAGAGCCAAACATGCAACCTACCATCCAT
GGTCGCCGCATCAACGTTTGCGACCCCAAACCCACGCACCAACACGAAGTTGTTCGTAGG
ATGTCACTGAATAAAGGCATCAAACCCTAGCAAAGCTCGACCAGGACCAAGTCCACTAAG
ATGAACAAATTCGGTCGGTCCTAGGACTGCCAACGAACCCACCTGACAATTCCGGGTGGG
GGTAGGGAGGATCTCACAGTCGGCGAAACTTCACCAATGAGAGGCGATGGGCAACCACAT
GCGTGTGACAGAGTTCAGCCCTCACAGGTCGACGACCACGATGCTGCTAGATGCCGGATA
GCACTGGCTCCGGACAAAGTTCCCTGATCCATGCATGAACCAGGTGAAACCCACGACTCC
ACTAGACACGCCATGCAATTTCAGCTCAGTGGGCCACCTCCGACAGCAGGGGATAGCAGC
GGCGACAGTGTGAAGTTCTAGAGTTACCCCAAAGAGACCAGGTAGTGGAGCAGACAGAAG
TGTTTCTAGAGATATCCCACAGAGACTAGGGAGTGGAGCAGACAGAAGGGACATCTTGTT
GCCGCCTATCGTCACCCGGGGCTTTGCTCGGCGTGGTGCCGTTCGACGGGGAGGCTGAGA
GTGTGAGGGCCTAGGGACGGAGGCTGAGATCACCTCTACTGTCGTCCACCACGAGGATGA
TGTTGGGGCCATCTGATGGAAACAAGTTTTCTGTATCAAAACTACAAATACACACCTCAA
AGTAAATAATTAGTTTATGAGTGGCCACCCAGCTTAGGCATTGGATGTACTCCCTCCGTC
CGGAAATACTTGTCCTAAAGATGNNNNNNNNNNNNNNNNNNTTAGTTATAGATACATTCA
TTATATCCATTTCTAGGACAAGTATTTTCGGACGGAGGGAGTACTATTTACTCTAACAAA
AGAGGCAGGTGAGGTGTGTGATGAGCCTAATCAAGAAAGACCGACTAGATCATCAGATTT
ATGCACTAAAATGGTCATGATCAAACTCTTAGCAAGAGGATGTTAACTACCCTTACTAAG
ATCACATGAATGGGGCCGTATGCATCGTTCTGATGCAGAGGCCGAAGGCAATCCTTCTTT
AAAAAAAAACTAAGATTCACATGAATTGTTTGTGCTCTCTATTTTCATTGTTTATGCATG
CGTGGATTAATGTAATTAACCCTTTTGAGAAAATTGTGACCAAGTTGTGTATTATGTGCG
TTCATGAACGGAATGGCGTACCTATGCTTTCTTCCTCATTTACACAATCCATTAATTACC
GCCTCATCTTGCAACCAAATAATTTATAATTTTTAGGGTCAATTACATCCCTGGTGCTGG
AAGTTGGAACATGCCTTTTTGCTTCATCCTGCGGGATCGAAAGAGGGACAAAACGTATGA
TGAATGTCTTTTATGTATGAAACTGAAACGGACACCTCCAAGAAATTAATCAGTTTATGA
ATACTGTTTACTCTAAAAAATAAGCAGCTGAGGCCTGATTCTTAGATTTAAAAATGCAAT
GAACTGGTCATGATTGAATCGTAGCAAGGAGGAAACTAACTACTCTTACTAATTAAGATC
ATATGAAATGTTCCTCCCGGGTCACACTTTCCTTTTGGTTAGCTAGGAACGTCCACTAAG
CACTAACATCGTTGCTTTCTTCCTACAAGTACTCAACAACTGACCAAGTAAGTGTCTGAT
TGACTGGGTTATCCTCCTTTTCTAAATAAAAATAAACGATTGATGTCGTCATGGTAACAG
GGGCTGCTAAAAATAGCAGGTGTATTATGTGGATTCATGCATGGACCAACGCGCCTTGAT
TTCTTCCCTGTTGACACAATCCGCTAACTACTGTGTCGTCTTATGCTGCCGGGTTTCATG
GTAAATAATCTAGTGGCAAATCCACAATTTCATAGTTTGAAAAGCTCGATTGCACGCGAT
CCTATAGCAACCTCTGCAAAGAAAACGATTGCCCTGCATGACTTGGCTTTCATTAACTGC
TCTTTTCCTGCCCACCAGTTCAGACTATGACCAAGTATATGATAGTACCACAGAAATGCA
AGCTAATAACATATCTATAAAAATTAAACGTGTCTTAAAAGGGAACCTGTAAACTTTATG
CAAATATTTTAATTAGCAGCAAGAGACCAGTTCAATCGGTTGGTCGGTTCCACTTGAATA
AATCTATTATTGCTCAAGAGTCCAGGCGCTGCTCGCTGCGCTTATATAAACACATACATC
CCCGGTATGTCTGAACCATCACTCACAACACAACCACAAACAGGAACACAAGAGAGAGAA
ACAATAAGATGTCATCCTCCTCTTCCTTCCTTGTCCTCGCTTCTCTTCTTGCATTGGTCT
CATGGCAGGCCACTGCCTCCGATCCTAGCCCACTCCAAGACTTTTGTGTGGCCGACATGC
ATTCACCAGGTATCGTCTGGTTTCTCCCCATGTTTTCACAGAATACATACGTTGACATGA
ATTTCTGAAAATTATTTGCAAATCGAAACAACTTTCTCGGATTTGAGCTTACATGTTGCA
TCTCCTCTATGCACCAGTGCGTGTCAATGGGTTTGTTTGCAAGAACCCGATGGAAGTTAA
CGCAGACGACTTCTTCAAGGCAGCCAATCTCGACAAGCCAAGGATGACCAACAAGGTTGG
ATCCAACGTCACCTTGATCAACGTCATGCAGATTGCTGGACTCAACACCCTCGGCATCTC
AATTGCGCGCATTGACTATGCTCCCTTGGGTCAGAACCCGCCACATACGCACCCTCGCGC
CACTGAGATCCTCACGGTACTCGAGGGGACACTGTATGTTGGCTTTGTCACATCCAACTT
GCCCGCCCCCAACAGAAACAAGTTCCTCTCGAAGGTGCTCAACAAAGGTGATGTGTTTGT
CTTCCCAGTGGGCCTCATTCACTTCCAATTCAACCCCAACCCCCACAAGCCCGCCGTAGC
AATTGCCGCACTCAGCAGCCAGAACCCAGGGGCTATCACAATTGCCAATGCAGTGTTTGG
GTCAAACCCACCAATATCGGATGATGTTCTTGCCAAAGCATTTCAGGTGGAAAAGAATAC
AATAGACTGGCTTCAGGCTCAGTTCTGGGAGAATAATCACAATTAAGTCAGACATTGGTT
GACTTCATCGGAAGATGAGTGCATAAACCAAGGACTTGGTTGAGCTTCTAGCCATGCTTC
CTGATCTATAGAATAAATGAAGCCTATGTCATGATGGTGTGTCTGTAAGCCGTGAATGTA
TTTCAACCTTTTGAATAATCAACAATATGATTTATTTTCTTCACTCTGATATTGTGTCAT
ATGCTATTTTGGTTTTCATGTGTCGTATTTGCCAAAAGAAACAAAAAATCAGGGTTCTTT
TTTCTTCACCGAAACAATAGATGATTAGGTTAAAAATGTAAAAAACACATAATCATGTGG
TAATTCAGTATATGTTTGATGCTAGGGTTTAATACATAGGATTATCCTGCAATACATGTG
AAGCATGCTATAGTTGGAGCCTGATTGTGCTCGGGATTTAAATGTGGAAGTTGAATGCGC
AAACTTTGCTTCCTAGAGTCGTCGTTCTTGTCTCTCGCTTTCACATTGTTTTCTCTTTTC
TTTGTAGAGAGCAAGAAATACGTTTTTTACTATGTTTTAAAACTGAGAACACTGCAGACC
ACGTTCCAAAAATCTGCTCCAGCATACATACAAGAAGCATGCATAATATACAAACGAAAC
AGTTACGACCCCCCCTCCCAGAGTGGAGATCTCGGTGGGCGCCGTATCATTAAAAAAAAC
AA